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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3542884..3544458+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002379-T1 ID=CBS51388_002379-T1|Name=CBS51388_002379-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1575bp|location=Sequence derived from alignment at An02:3542884..3544458+ (Aspergillus niger CBS 513.88)
ATGCAGATCGATCCGGCTGCTCTGAGTCGGACAGACTCGGCCTCCACTAC
AATAGCCTCGTCTAAAAGCACTGCTCCAAATGCTCCGCCAACGCAGAAGT
CTACCAAAGCCCTCATTTCCGTGCCGCGCCTGGATCTTGAGCCCATCTAC
ACCGAGCTGAAGGCCGCCATCGGCGACAATTGGGCTGACTACAAGGAAGC
TACTTCCCTCTTTCTTCTAGGTATGTCTGTGCATTGTCACGTCTATCCCC
ATCTTCTTGCGAGGACCTATCTATATCATTGTTCTTGAGTTTCTGTCTCT
TATCTTACAATAAGCCTCGGTCCCACTTTTAACCTGAATGCGTATGCTGA
CGCCGCCCTTCTCCCCCAACGAACAGGACAACTGAACCAAAGCGAATTGT
CGTCGCGAGTCGATCATATAATATGCGCCGATCAAAAAACCGAGCATCTA
CATAACAATTTCGTATGCGCAATCATTGGCAATCTTACACGGGATCTTCC
GGATCATGGTGTCGCAAGTTGGGTGTCGGCGAACGACAAGCCGTCCGTCG
TGTCAAAGCCGACATCGGGCGATGCCGCTGAACAAAGGCTCAAGACGGAG
GTTATGCAACTCCCTCCCCGGGATCGTCGACGAATCAAAGCTATTCCCGA
GGTATGCGACCTGCTCCAGAGATGCGACAGCCTCCCCCCTGAGATGTGCG
CGTACAAGGCTGACCATGGATCTATACAAAGCGTGACCCCCATGAACTGT
CGCCGAACGAACTGGAGGAGTATCATCTGGCGAAACAGATCAAGTTGCCA
AGTCAAGTACCAGCTAGTGCGGGCGGGTTGAATAAGACAAGTAGGTTCAT
GCCAGAGATCTCGTCTGTTTTTCGTCTGCTCGACCGAATGATGCTAATCA
TCCTGGATCTCGGTAGACTGGGAACTCGAAATTCGAAAACGATATGCACA
ACCTCTGGCGTCAGAGTCCGGCGAATTCCCGGACGCCGAATCTATCCACG
CACGTATGGTTCCCATCTGCTACGAAGAATCCATTGTCAGTGGTGCAAGC
CTTCCCTGTGCCGAGTTCATGGCGATCGCAACGGAGACTTTTGTCAAGGA
AGTTCTATCCGTAGTGTTCTCACGGACGAGATCGAACGGCCCTTCAGGGA
CAATAAACGGCATGATGATGCGCAAGTACCGACAGCAGCTCGAAAGTGAG
GAATTGGCTTTCACGCGAGGAGAGATCGTCAAGGATAGCGCGACCGGTCT
TCTCCCAGTCGAGGCCAAGGAGGCAAGCACCCGAAAACCCTTGGGCGTGC
GAGATCTCCGATTATCCTTGGAACTCGGCGGCGGTGTCCTGAGTCATATG
CCTCTACTCGTGGATCAAATCATGGGTGGGTATCTCGAGGATGAGTTAGA
AACAGACAAACAGGACCGGGTCGAGGAGGCGGTCGACGTCCCCGACGCGA
AGCCCGACAGTTTCATGGACGAAATGGACGTGGACGAGGCAAAATTCGAC
TGGGAAGGCGGGACAGTCACGGATCGGGAGCAATTGGGTGCCTTGCTGGA
TGAATGTTTGTCGATGGCCTCGTGA back to topCoding sequence (CDS) from alignment at An02:3542884..3544458+ >CBS51388_002379-T1 ID=CBS51388_002379-T1|Name=CBS51388_002379-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5052bp|location=Sequence derived from alignment at An02:3542884..3544458+ (Aspergillus niger CBS 513.88)
ATGCAGATCGATCCGGCTGCTCTGAGTCGGACAGACTCGGCCTCCACTAC
AATAGCCTCGTCTAAAAGCACTGCTCCAAATGCTCCGCCAACGCAGAAGT
CTACCAAAGCCCTCATTTCCGTGCCGCGCCTGGATCTTGAGCCCATCTAC
ACCGAGCTGAAGGCCGCCATCGGCGACAATTGGGCTGACTACAAGGAAGC
TACTTCCCTCTTTCTTCTAGGACAACTGAACCAAAGCGAATTGTCGTCGC
GAGTCGATCATATAATATGCGCCGATCAAAAAACCGAGCATCTACATAAC
AATTTCGTATGCGCAATCATTGGCAATCTTACACGGGATCTTCCGGATCA
TGGTGTCGCAAGTTGGGTGTCGGCGAACGACAAGCCGTCCGTCGTGTCAA
AGCCGACATCGGGCGATGCCGCTGAACAAAGGCTCAAGACGGAGGTTATG
CAACTCCCTCCCCGGGATCGTCGACGAATCAAAGCTATTCCCGAGCGTGA
CCCCCATGAACTGTCGCCGAACGAACTGGAGGAGTATCATCTGGCGAAAC
AGATCAAGTTGCCAAGTCAAGTACCAGCTAGTGCGGGCGGGTTGAATAAG
ACAAACTGGGAACTCGAAATTCGAAAACGATATGCACAACCTCTGGCGTC
AGAGTCCGGCGAATTCCCGGACGCCGAATCTATCCACGCACGTATGGTTC
CCATCTGCTACGAAGAATCCATTGTCAGTGGTGCAAGCCTTCCCTGTGCC
GAGTTCATGGCGATCGCAACGGAGACTTTTGTCAAGGAAGTTCTATCCGT
AGTGTTCTCACGGACGAGATCGAACGGCCCTTCAGGGACAATAAACGGCA
TGATGATGCGCAAGTACCGACAGCAGCTCGAAAGTGAGGAATTGGCTTTC
ACGCGAGGAGAGATCGTCAAGGATAGCGCGACCGGTCTTCTCCCAGTCGA
GGCCAAGGAGGCAAGCACCCGAAAACCCTTGGGCGTGCGAGATCTCCGAT
TATCCTTGGAACTCGGCGGCGGTGTCCTGAGTCATATGCCTCTACTCGTG
GATCAAATCATGGGTGGGTATCTCGAGGATGAGTTAGAAACAGACAAACA
GGACCGGGTCGAGGAGGCGGTCGACGTCCCCGACGCGAAGCCCGACAGTT
TCATGGACGAAATGGACGTGGACGAGGCAAAATTCGACTGGGAAGGCGGG
ACAGTCACGGATCGGGAGCAATTGGGTGCCTTGCTGGATGAATGTTTGTC
GATGGCCTCGTGAATGCAGATCGATCCGGCTGCTCTGAGTCGGACAGACT
CGGCCTCCACTACAATAGCCTCGTCTAAAAGCACTGCTCCAAATGCTCCG
CCAACGCAGAAGTCTACCAAAGCCCTCATTTCCGTGCCGCGCCTGGATCT
TGAGCCCATCTACACCGAGCTGAAGGCCGCCATCGGCGACAATTGGGCTG
ACTACAAGGAAGCTACTTCCCTCTTTCTTCTAGGACAACTGAACCAAAGC
GAATTGTCGTCGCGAGTCGATCATATAATATGCGCCGATCAAAAAACCGA
GCATCTACATAACAATTTCGTATGCGCAATCATTGGCAATCTTACACGGG
ATCTTCCGGATCATGGTGTCGCAAGTTGGGTGTCGGCGAACGACAAGCCG
TCCGTCGTGTCAAAGCCGACATCGGGCGATGCCGCTGAACAAAGGCTCAA
GACGGAGGTTATGCAACTCCCTCCCCGGGATCGTCGACGAATCAAAGCTA
TTCCCGAGCGTGACCCCCATGAACTGTCGCCGAACGAACTGGAGGAGTAT
CATCTGGCGAAACAGATCAAGTTGCCAAGTCAAGTACCAGCTAGTGCGGG
CGGGTTGAATAAGACAAACTGGGAACTCGAAATTCGAAAACGATATGCAC
AACCTCTGGCGTCAGAGTCCGGCGAATTCCCGGACGCCGAATCTATCCAC
GCACGTATGGTTCCCATCTGCTACGAAGAATCCATTGTCAGTGGTGCAAG
CCTTCCCTGTGCCGAGTTCATGGCGATCGCAACGGAGACTTTTGTCAAGG
AAGTTCTATCCGTAGTGTTCTCACGGACGAGATCGAACGGCCCTTCAGGG
ACAATAAACGGCATGATGATGCGCAAGTACCGACAGCAGCTCGAAAGTGA
GGAATTGGCTTTCACGCGAGGAGAGATCGTCAAGGATAGCGCGACCGGTC
TTCTCCCAGTCGAGGCCAAGGAGGCAAGCACCCGAAAACCCTTGGGCGTG
CGAGATCTCCGATTATCCTTGGAACTCGGCGGCGGTGTCCTGAGTCATAT
GCCTCTACTCGTGGATCAAATCATGGGTGGGTATCTCGAGGATGAGTTAG
AAACAGACAAACAGGACCGGGTCGAGGAGGCGGTCGACGTCCCCGACGCG
AAGCCCGACAGTTTCATGGACGAAATGGACGTGGACGAGGCAAAATTCGA
CTGGGAAGGCGGGACAGTCACGGATCGGGAGCAATTGGGTGCCTTGCTGG
ATGAATGTTTGTCGATGGCCTCGTGAATGCAGATCGATCCGGCTGCTCTG
AGTCGGACAGACTCGGCCTCCACTACAATAGCCTCGTCTAAAAGCACTGC
TCCAAATGCTCCGCCAACGCAGAAGTCTACCAAAGCCCTCATTTCCGTGC
CGCGCCTGGATCTTGAGCCCATCTACACCGAGCTGAAGGCCGCCATCGGC
GACAATTGGGCTGACTACAAGGAAGCTACTTCCCTCTTTCTTCTAGGACA
ACTGAACCAAAGCGAATTGTCGTCGCGAGTCGATCATATAATATGCGCCG
ATCAAAAAACCGAGCATCTACATAACAATTTCGTATGCGCAATCATTGGC
AATCTTACACGGGATCTTCCGGATCATGGTGTCGCAAGTTGGGTGTCGGC
GAACGACAAGCCGTCCGTCGTGTCAAAGCCGACATCGGGCGATGCCGCTG
AACAAAGGCTCAAGACGGAGGTTATGCAACTCCCTCCCCGGGATCGTCGA
CGAATCAAAGCTATTCCCGAGCGTGACCCCCATGAACTGTCGCCGAACGA
ACTGGAGGAGTATCATCTGGCGAAACAGATCAAGTTGCCAAGTCAAGTAC
CAGCTAGTGCGGGCGGGTTGAATAAGACAAACTGGGAACTCGAAATTCGA
AAACGATATGCACAACCTCTGGCGTCAGAGTCCGGCGAATTCCCGGACGC
CGAATCTATCCACGCACGTATGGTTCCCATCTGCTACGAAGAATCCATTG
TCAGTGGTGCAAGCCTTCCCTGTGCCGAGTTCATGGCGATCGCAACGGAG
ACTTTTGTCAAGGAAGTTCTATCCGTAGTGTTCTCACGGACGAGATCGAA
CGGCCCTTCAGGGACAATAAACGGCATGATGATGCGCAAGTACCGACAGC
AGCTCGAAAGTGAGGAATTGGCTTTCACGCGAGGAGAGATCGTCAAGGAT
AGCGCGACCGGTCTTCTCCCAGTCGAGGCCAAGGAGGCAAGCACCCGAAA
ACCCTTGGGCGTGCGAGATCTCCGATTATCCTTGGAACTCGGCGGCGGTG
TCCTGAGTCATATGCCTCTACTCGTGGATCAAATCATGGGTGGGTATCTC
GAGGATGAGTTAGAAACAGACAAACAGGACCGGGTCGAGGAGGCGGTCGA
CGTCCCCGACGCGAAGCCCGACAGTTTCATGGACGAAATGGACGTGGACG
AGGCAAAATTCGACTGGGAAGGCGGGACAGTCACGGATCGGGAGCAATTG
GGTGCCTTGCTGGATGAATGTTTGTCGATGGCCTCGTGAATGCAGATCGA
TCCGGCTGCTCTGAGTCGGACAGACTCGGCCTCCACTACAATAGCCTCGT
CTAAAAGCACTGCTCCAAATGCTCCGCCAACGCAGAAGTCTACCAAAGCC
CTCATTTCCGTGCCGCGCCTGGATCTTGAGCCCATCTACACCGAGCTGAA
GGCCGCCATCGGCGACAATTGGGCTGACTACAAGGAAGCTACTTCCCTCT
TTCTTCTAGGACAACTGAACCAAAGCGAATTGTCGTCGCGAGTCGATCAT
ATAATATGCGCCGATCAAAAAACCGAGCATCTACATAACAATTTCGTATG
CGCAATCATTGGCAATCTTACACGGGATCTTCCGGATCATGGTGTCGCAA
GTTGGGTGTCGGCGAACGACAAGCCGTCCGTCGTGTCAAAGCCGACATCG
GGCGATGCCGCTGAACAAAGGCTCAAGACGGAGGTTATGCAACTCCCTCC
CCGGGATCGTCGACGAATCAAAGCTATTCCCGAGCGTGACCCCCATGAAC
TGTCGCCGAACGAACTGGAGGAGTATCATCTGGCGAAACAGATCAAGTTG
CCAAGTCAAGTACCAGCTAGTGCGGGCGGGTTGAATAAGACAAACTGGGA
ACTCGAAATTCGAAAACGATATGCACAACCTCTGGCGTCAGAGTCCGGCG
AATTCCCGGACGCCGAATCTATCCACGCACGTATGGTTCCCATCTGCTAC
GAAGAATCCATTGTCAGTGGTGCAAGCCTTCCCTGTGCCGAGTTCATGGC
GATCGCAACGGAGACTTTTGTCAAGGAAGTTCTATCCGTAGTGTTCTCAC
GGACGAGATCGAACGGCCCTTCAGGGACAATAAACGGCATGATGATGCGC
AAGTACCGACAGCAGCTCGAAAGTGAGGAATTGGCTTTCACGCGAGGAGA
GATCGTCAAGGATAGCGCGACCGGTCTTCTCCCAGTCGAGGCCAAGGAGG
CAAGCACCCGAAAACCCTTGGGCGTGCGAGATCTCCGATTATCCTTGGAA
CTCGGCGGCGGTGTCCTGAGTCATATGCCTCTACTCGTGGATCAAATCAT
GGGTGGGTATCTCGAGGATGAGTTAGAAACAGACAAACAGGACCGGGTCG
AGGAGGCGGTCGACGTCCCCGACGCGAAGCCCGACAGTTTCATGGACGAA
ATGGACGTGGACGAGGCAAAATTCGACTGGGAAGGCGGGACAGTCACGGA
TCGGGAGCAATTGGGTGCCTTGCTGGATGAATGTTTGTCGATGGCCTCGT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0070461 | SAGA-type complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024738 |
| DBxref | PFAM:PF12767 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3542884..3544458 + |
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