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CBS51388_002381-T1, CBS51388_002381-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002381-T1
Unique NameCBS51388_002381-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:3549023..3550322+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002381-T1 ID=CBS51388_002381-T1|Name=CBS51388_002381-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1300bp|location=Sequence derived from alignment at An02:3549023..3550322+ (Aspergillus niger CBS 513.88)
ATGCCCAAGGTCAAACAGCAGAAGCGCAATAGCGCTTCGAAGGCCAGTCC
CTATGCCGATGCGGCGGCAAAGACGAAGGCCGCCAACACCGTCTTCAAGA
TGAATACCGATCTCGGCCAGCACATTCTGAAAAACCCTGGCGTGGCTCAA
CGAATTGTTGACAAAGCCGAGTTGAAACAGAGCGATGTGAGTCGTCCACA
AACTTGGCCCATGTACCTTACAGATTTGCCTAACCTGGAGGGGCTATTTT
TTTTAAATAGGTTGTTCTGGAAATTGGTCCTGGTACCGGTAACTTGACCG
TGAAGATCCTCGAACAGGCGAAAAAAGTTATCGCCGTTGAGCTCGACCCT
CGAATGGCTGCCGAAGTCACCAAGCGTGTTCAAGGCACGCCTGCCCAGAA
ACGCTTAGACGTTATCCTTGGAGATGTGATCAAAACAGACCTTCCATATT
TCGATGTTTGCATCAGCAACACGCCGTATCAGGTACGCTCTATAAACTAT
CTATCTCTTCAAAGTGGAAGAAAGGCTAATTATTCGCCCGCTAGATCTCT
TCTCCCCTCACATTTAAACTTCTCGCGACGTCTCCGGCGCCCCGCATTTG
TGTTCTCATGTTTCAACGAGAATTTGCTCTAAGGTTATTCGCGAAGCCGG
GCGATAAGCTCTACAGTCGACTCTCCGTCAATGCTCAGATGTGGGCTAAG
ATCGACCACATCATGAAGGTGGGCAAGAACAATTTCAAGCCCCCACCGCT
GGTCGAGTCGAGCGTTGTCCGTCTGGTACCTAAGAACCCCAGGCCACAGA
TCAACTACGATGAGTGGGACGGGCTTCTGAGAATTCTATTCGTCCGGAAG
AACAAGACAATTCGGTCAAGTTTCCTTGGCAAGTCCACGGTCATGGATAT
GTTGGAAGCCAACTATCGAACATGGTGTGCGCAAAACGATATCCCAGTTG
AGGATGGGCCGGCGGAAGGCGCCGAATCTGATGCGATGGACATTGGCAAC
GCGCAAGATGAGGATGATGATGAGGGTGAAGACGAGCCTGACGAGGGCAT
GGACGTGGACGACGAAGATGACGTACCCGACTTCTTCAAGGAACAGACGA
ACGCGCGTATTCAAGAGGCTCTTAAGAATCGGCCTAGTCGTAAGAAGAAG
GGAAAGGTAGCAGAGCTCGTCCGGGAGAAGGTACGGCAGGTGTTGGAAGA
TGAAACACGCCTTGCGGACAAGCGTGCAAGGATGTGCGATGAGAACGACT
TCCTGAAGTTATTGTGGGCCTTCAACCAGAAGGGCTTCCATTTCAGCTGA
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Coding sequence (CDS) from alignment at An02:3549023..3550322+

>CBS51388_002381-T1 ID=CBS51388_002381-T1|Name=CBS51388_002381-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3492bp|location=Sequence derived from alignment at An02:3549023..3550322+ (Aspergillus niger CBS 513.88)
ATGCCCAAGGTCAAACAGCAGAAGCGCAATAGCGCTTCGAAGGCCAGTCC
CTATGCCGATGCGGCGGCAAAGACGAAGGCCGCCAACACCGTCTTCAAGA
TGAATACCGATCTCGGCCAGCACATTCTGAAAAACCCTGGCGTGGCTCAA
CGAATTGTTGACAAAGCCGAGTTGAAACAGAGCGATGTTGTTCTGGAAAT
TGGTCCTGGTACCGGTAACTTGACCGTGAAGATCCTCGAACAGGCGAAAA
AAGTTATCGCCGTTGAGCTCGACCCTCGAATGGCTGCCGAAGTCACCAAG
CGTGTTCAAGGCACGCCTGCCCAGAAACGCTTAGACGTTATCCTTGGAGA
TGTGATCAAAACAGACCTTCCATATTTCGATGTTTGCATCAGCAACACGC
CGTATCAGATCTCTTCTCCCCTCACATTTAAACTTCTCGCGACGTCTCCG
GCGCCCCGCATTTGTGTTCTCATGTTTCAACGAGAATTTGCTCTAAGGTT
ATTCGCGAAGCCGGGCGATAAGCTCTACAGTCGACTCTCCGTCAATGCTC
AGATGTGGGCTAAGATCGACCACATCATGAAGGTGGGCAAGAACAATTTC
AAGCCCCCACCGCTGGTCGAGTCGAGCGTTGTCCGTCTGGTACCTAAGAA
CCCCAGGCCACAGATCAACTACGATGAGTGGGACGGGCTTCTGAGAATTC
TATTCGTCCGGAAGAACAAGACAATTCGGTCAAGTTTCCTTGGCAAGTCC
ACGGTCATGGATATGTTGGAAGCCAACTATCGAACATGGTGTGCGCAAAA
CGATATCCCAGTTGAGGATGGGCCGGCGGAAGGCGCCGAATCTGATGCGA
TGGACATTGGCAACGCGCAAGATGAGGATGATGATGAGGGTGAAGACGAG
CCTGACGAGGGCATGGACGTGGACGACGAAGATGACGTACCCGACTTCTT
CAAGGAACAGACGAACGCGCGTATTCAAGAGGCTCTTAAGAATCGGCCTA
GTCGTAAGAAGAAGGGAAAGGTAGCAGAGCTCGTCCGGGAGAAGGTACGG
CAGGTGTTGGAAGATGAAACACGCCTTGCGGACAAGCGTGCAAGGATGTG
CGATGAGAACGACTTCCTGAAGTTATTGTGGGCCTTCAACCAGAAGGGCT
TCCATTTCAGCTGAATGCCCAAGGTCAAACAGCAGAAGCGCAATAGCGCT
TCGAAGGCCAGTCCCTATGCCGATGCGGCGGCAAAGACGAAGGCCGCCAA
CACCGTCTTCAAGATGAATACCGATCTCGGCCAGCACATTCTGAAAAACC
CTGGCGTGGCTCAACGAATTGTTGACAAAGCCGAGTTGAAACAGAGCGAT
GTTGTTCTGGAAATTGGTCCTGGTACCGGTAACTTGACCGTGAAGATCCT
CGAACAGGCGAAAAAAGTTATCGCCGTTGAGCTCGACCCTCGAATGGCTG
CCGAAGTCACCAAGCGTGTTCAAGGCACGCCTGCCCAGAAACGCTTAGAC
GTTATCCTTGGAGATGTGATCAAAACAGACCTTCCATATTTCGATGTTTG
CATCAGCAACACGCCGTATCAGATCTCTTCTCCCCTCACATTTAAACTTC
TCGCGACGTCTCCGGCGCCCCGCATTTGTGTTCTCATGTTTCAACGAGAA
TTTGCTCTAAGGTTATTCGCGAAGCCGGGCGATAAGCTCTACAGTCGACT
CTCCGTCAATGCTCAGATGTGGGCTAAGATCGACCACATCATGAAGGTGG
GCAAGAACAATTTCAAGCCCCCACCGCTGGTCGAGTCGAGCGTTGTCCGT
CTGGTACCTAAGAACCCCAGGCCACAGATCAACTACGATGAGTGGGACGG
GCTTCTGAGAATTCTATTCGTCCGGAAGAACAAGACAATTCGGTCAAGTT
TCCTTGGCAAGTCCACGGTCATGGATATGTTGGAAGCCAACTATCGAACA
TGGTGTGCGCAAAACGATATCCCAGTTGAGGATGGGCCGGCGGAAGGCGC
CGAATCTGATGCGATGGACATTGGCAACGCGCAAGATGAGGATGATGATG
AGGGTGAAGACGAGCCTGACGAGGGCATGGACGTGGACGACGAAGATGAC
GTACCCGACTTCTTCAAGGAACAGACGAACGCGCGTATTCAAGAGGCTCT
TAAGAATCGGCCTAGTCGTAAGAAGAAGGGAAAGGTAGCAGAGCTCGTCC
GGGAGAAGGTACGGCAGGTGTTGGAAGATGAAACACGCCTTGCGGACAAG
CGTGCAAGGATGTGCGATGAGAACGACTTCCTGAAGTTATTGTGGGCCTT
CAACCAGAAGGGCTTCCATTTCAGCTGAATGCCCAAGGTCAAACAGCAGA
AGCGCAATAGCGCTTCGAAGGCCAGTCCCTATGCCGATGCGGCGGCAAAG
ACGAAGGCCGCCAACACCGTCTTCAAGATGAATACCGATCTCGGCCAGCA
CATTCTGAAAAACCCTGGCGTGGCTCAACGAATTGTTGACAAAGCCGAGT
TGAAACAGAGCGATGTTGTTCTGGAAATTGGTCCTGGTACCGGTAACTTG
ACCGTGAAGATCCTCGAACAGGCGAAAAAAGTTATCGCCGTTGAGCTCGA
CCCTCGAATGGCTGCCGAAGTCACCAAGCGTGTTCAAGGCACGCCTGCCC
AGAAACGCTTAGACGTTATCCTTGGAGATGTGATCAAAACAGACCTTCCA
TATTTCGATGTTTGCATCAGCAACACGCCGTATCAGATCTCTTCTCCCCT
CACATTTAAACTTCTCGCGACGTCTCCGGCGCCCCGCATTTGTGTTCTCA
TGTTTCAACGAGAATTTGCTCTAAGGTTATTCGCGAAGCCGGGCGATAAG
CTCTACAGTCGACTCTCCGTCAATGCTCAGATGTGGGCTAAGATCGACCA
CATCATGAAGGTGGGCAAGAACAATTTCAAGCCCCCACCGCTGGTCGAGT
CGAGCGTTGTCCGTCTGGTACCTAAGAACCCCAGGCCACAGATCAACTAC
GATGAGTGGGACGGGCTTCTGAGAATTCTATTCGTCCGGAAGAACAAGAC
AATTCGGTCAAGTTTCCTTGGCAAGTCCACGGTCATGGATATGTTGGAAG
CCAACTATCGAACATGGTGTGCGCAAAACGATATCCCAGTTGAGGATGGG
CCGGCGGAAGGCGCCGAATCTGATGCGATGGACATTGGCAACGCGCAAGA
TGAGGATGATGATGAGGGTGAAGACGAGCCTGACGAGGGCATGGACGTGG
ACGACGAAGATGACGTACCCGACTTCTTCAAGGAACAGACGAACGCGCGT
ATTCAAGAGGCTCTTAAGAATCGGCCTAGTCGTAAGAAGAAGGGAAAGGT
AGCAGAGCTCGTCCGGGAGAAGGTACGGCAGGTGTTGGAAGATGAAACAC
GCCTTGCGGACAAGCGTGCAAGGATGTGCGATGAGAACGACTTCCTGAAG
TTATTGTGGGCCTTCAACCAGAAGGGCTTCCATTTCAGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0000154rRNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0008649rRNA methyltransferase activity
GO:0000179rRNA (adenine-N6,N6-)-dimethyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002381CBS51388_002381Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002381-T1.exon1CBS51388_002381-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002381-T1.exon2CBS51388_002381-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002381-T1.exon3CBS51388_002381-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002381-T1.cdsCBS51388_002381-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002381-T1CBS51388_002381-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263720
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR020596
DBxrefInterPro:IPR001737
DBxrefInterPro:IPR011530
DBxrefInterPro:IPR020598
DBxrefPFAM:PF00398
DBxrefPFAM:PF13649
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:3549023..3550322 +
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