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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3558265..3560448- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002384-T1 ID=CBS51388_002384-T1|Name=CBS51388_002384-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2184bp|location=Sequence derived from alignment at An02:3558265..3560448- (Aspergillus niger CBS 513.88)
ATGCGGCTCATTCCTTCTTTTTCGACCCTTACGGCGCTGGGTCTCCTGGC
CACTCGAGCCCTCGCTGCCGATACCCTCAGCACCAATGGTCTGACAACTT
GTATGTCAGACTCTGCTATCCAAGTCGACAAACTATCCGTCACCTATACC
CGTTCTACTAGAGAAATCGTCTTCGATGTTTCCGGCACCAATGGGGTAGA
ACAGAATGTCACGGCAATCTTGACCATCTATGCCTACGGCAGTCAACTCT
ACTCCGAAACGTTCGACCCGTGCAGCAGCAAATACTACGTGGAGCAACTC
TGTCCCGTGGCTGCCGGTAGCTTCTCCGCGACTGGCACGCAGACCCTACC
TGAATCGATCGCTAGTGAAATCCCCTCCATCGCCTTCGCCATCCCAGACT
TGGATGGCCAAGTGAAGCTTCAATTGCTGTCCAAGACCGACAATGACGAG
CTGGCATGCATCCAATCGGAACTGACCAACGGCAATACTATGCAGATCGC
TGGTGTATCCTATGCTGCTGCTGGTGTGGCTGGTGCGGCATTGGCCGTGA
GCGGGCTGTCAGCTCTGGGTGCTGTTGGCCACCCTGGTGCCGTCTCATCT
AGTCCCAGCTTTGGTGATGTCGTGAGTTGGTTTCACACTATGGCCACTAA
TGGAATGCTCAGTGTCAGCTACCCGACGGTGTACCGCAGCTTTTCGAAGA
ACTTTGCCTTCAGCACGGGTTTGATTCCTTGGGGTCAAATGCAGGAGTCC
ATCGATAACTTCCGGAAGTCGACCGGCGGCAATCTCACCGACAACAGCTA
CCAGTATCTTCTCAATGCCACGCTCGTGTACTCTGACGGCACGAATTCTA
GCTCAAAGTCGAAGCGAGGACTGGATCTGGTCACAGGCATGGCTAACCTA
GCTGCGCGCGAGGTCTCGACTTCGTATAGCAGCAATACTACTTCGTCGTC
TAACAGCACCAGTGACGACAGCAGTAGTTTCGAACATTTCGTCTCCGGAA
TTGAGGCCTATGCCGAACAGTTGACCATCCCTCAAGCCAACACCTTCATG
ACCGTTCTGCTCATTTTCGCTATCCTAATTGCCGCTATTGCCGTTGGCAT
CTTGTTGCTCAAGGTCATCCTCGAAGTTTGGGCGCTCTACGGCTCTTTCC
CGGACAAACTCACCAACTTCCGCAAAGACTACTGGGGTCTCCTGGGTCGC
ACAATTACCAACTTGATTCTGCTGCTGTACGGCGTTTGGGTGATTTGGTG
TGTCTATCAGCTCAGCAGTGGGGATTCGTGGGCGGCGAAGCTCTTGGCTG
CTGTGGCGCTTACAGTTTTCACGGCTGTGTTATTGTACTTTGGTCTCAAG
ATCATGTTCGTGGCTCGGAAGTACAAGAAGACTGAAGGTGATGCGTCCCA
TTTGTACGACAACGATGAAACCTGGCGCAAGTACAGTCTTTTCTACGACA
ACTACAAAAAGGACTACTGGTGGGCATTCGTCCCTGCCATTGTATACATG
TTTGCCAAGGGTTGCGTCATTGCTGCTGGAGATGGTCATGGGCTTGCCCA
AAGCGCTGGCCAACTCATCGTGGAGGCTCTCATGCTCACCCTTTTGCTGT
GGAACCGTCCGTACGTTGCCAAGTCTAGCCAGTGGATCAACATTTCAGTC
CAGGTGGTTCGTGTCTTGTCAATCGCGTGTGTGTTGATCTTCGTCGACGA
GCTGGGGCTCTCGGAGACGACCAAAACTGTTACCGGCATTGTCCTCATTG
CTATTCAGTCGGGACTGAGTGGTATCTTGGCCATTCTTATTGCCACCAAC
GCCATTATCCTCTGCATTCGCGAGAACCCTCATGCTAAACGGAAGAGGGA
AGCTAACAAAATGAATCGTGATCTCGATGATTTGACCCCTCTTGACGCCC
GTGAATCTCTGCTCATGGAGCATCCTCCTCGCAAGGATTACGCTGAAATG
AGCAAGTTCAACTTTACCGGTCCTTACGAACCATACCGGGATCAACATGA
TTCGAAATCGCGACACAGCCCTACAGGTAGCACGGATCGGCTGGTTGATT
CAAGCTACCCTCTTGAAGACGTCAATGGTCGAAGTATAAGTCGAGAAAGC
CGCCGAAGCCATGACAGTCATGGCAGCCATGAAAACCCTGAAAAGCACCA
TGCCACGACCCCGGGTTATGGGTTCGCTTACTGA back to topCoding sequence (CDS) from alignment at An02:3558265..3560448- >CBS51388_002384-T1 ID=CBS51388_002384-T1|Name=CBS51388_002384-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2184bp|location=Sequence derived from alignment at An02:3558265..3560448- (Aspergillus niger CBS 513.88)
ATGCGGCTCATTCCTTCTTTTTCGACCCTTACGGCGCTGGGTCTCCTGGC
CACTCGAGCCCTCGCTGCCGATACCCTCAGCACCAATGGTCTGACAACTT
GTATGTCAGACTCTGCTATCCAAGTCGACAAACTATCCGTCACCTATACC
CGTTCTACTAGAGAAATCGTCTTCGATGTTTCCGGCACCAATGGGGTAGA
ACAGAATGTCACGGCAATCTTGACCATCTATGCCTACGGCAGTCAACTCT
ACTCCGAAACGTTCGACCCGTGCAGCAGCAAATACTACGTGGAGCAACTC
TGTCCCGTGGCTGCCGGTAGCTTCTCCGCGACTGGCACGCAGACCCTACC
TGAATCGATCGCTAGTGAAATCCCCTCCATCGCCTTCGCCATCCCAGACT
TGGATGGCCAAGTGAAGCTTCAATTGCTGTCCAAGACCGACAATGACGAG
CTGGCATGCATCCAATCGGAACTGACCAACGGCAATACTATGCAGATCGC
TGGTGTATCCTATGCTGCTGCTGGTGTGGCTGGTGCGGCATTGGCCGTGA
GCGGGCTGTCAGCTCTGGGTGCTGTTGGCCACCCTGGTGCCGTCTCATCT
AGTCCCAGCTTTGGTGATGTCGTGAGTTGGTTTCACACTATGGCCACTAA
TGGAATGCTCAGTGTCAGCTACCCGACGGTGTACCGCAGCTTTTCGAAGA
ACTTTGCCTTCAGCACGGGTTTGATTCCTTGGGGTCAAATGCAGGAGTCC
ATCGATAACTTCCGGAAGTCGACCGGCGGCAATCTCACCGACAACAGCTA
CCAGTATCTTCTCAATGCCACGCTCGTGTACTCTGACGGCACGAATTCTA
GCTCAAAGTCGAAGCGAGGACTGGATCTGGTCACAGGCATGGCTAACCTA
GCTGCGCGCGAGGTCTCGACTTCGTATAGCAGCAATACTACTTCGTCGTC
TAACAGCACCAGTGACGACAGCAGTAGTTTCGAACATTTCGTCTCCGGAA
TTGAGGCCTATGCCGAACAGTTGACCATCCCTCAAGCCAACACCTTCATG
ACCGTTCTGCTCATTTTCGCTATCCTAATTGCCGCTATTGCCGTTGGCAT
CTTGTTGCTCAAGGTCATCCTCGAAGTTTGGGCGCTCTACGGCTCTTTCC
CGGACAAACTCACCAACTTCCGCAAAGACTACTGGGGTCTCCTGGGTCGC
ACAATTACCAACTTGATTCTGCTGCTGTACGGCGTTTGGGTGATTTGGTG
TGTCTATCAGCTCAGCAGTGGGGATTCGTGGGCGGCGAAGCTCTTGGCTG
CTGTGGCGCTTACAGTTTTCACGGCTGTGTTATTGTACTTTGGTCTCAAG
ATCATGTTCGTGGCTCGGAAGTACAAGAAGACTGAAGGTGATGCGTCCCA
TTTGTACGACAACGATGAAACCTGGCGCAAGTACAGTCTTTTCTACGACA
ACTACAAAAAGGACTACTGGTGGGCATTCGTCCCTGCCATTGTATACATG
TTTGCCAAGGGTTGCGTCATTGCTGCTGGAGATGGTCATGGGCTTGCCCA
AAGCGCTGGCCAACTCATCGTGGAGGCTCTCATGCTCACCCTTTTGCTGT
GGAACCGTCCGTACGTTGCCAAGTCTAGCCAGTGGATCAACATTTCAGTC
CAGGTGGTTCGTGTCTTGTCAATCGCGTGTGTGTTGATCTTCGTCGACGA
GCTGGGGCTCTCGGAGACGACCAAAACTGTTACCGGCATTGTCCTCATTG
CTATTCAGTCGGGACTGAGTGGTATCTTGGCCATTCTTATTGCCACCAAC
GCCATTATCCTCTGCATTCGCGAGAACCCTCATGCTAAACGGAAGAGGGA
AGCTAACAAAATGAATCGTGATCTCGATGATTTGACCCCTCTTGACGCCC
GTGAATCTCTGCTCATGGAGCATCCTCCTCGCAAGGATTACGCTGAAATG
AGCAAGTTCAACTTTACCGGTCCTTACGAACCATACCGGGATCAACATGA
TTCGAAATCGCGACACAGCCCTACAGGTAGCACGGATCGGCTGGTTGATT
CAAGCTACCCTCTTGAAGACGTCAATGGTCGAAGTATAAGTCGAGAAAGC
CGCCGAAGCCATGACAGTCATGGCAGCCATGAAAACCCTGAAAAGCACCA
TGCCACGACCCCGGGTTATGGGTTCGCTTACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| DBxref | InterPro:IPR010308 |
| DBxref | InterPro:IPR032800 |
| DBxref | PFAM:PF14558 |
| DBxref | PFAM:PF06011 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3558265..3560448 - |
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