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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3574563..3576653- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002390-T1 ID=CBS51388_002390-T1|Name=CBS51388_002390-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2091bp|location=Sequence derived from alignment at An02:3574563..3576653- (Aspergillus niger CBS 513.88)
ATGTGCTACTTGCCAACGACGAAAGGTATGTGTGTGTTTGTCTCTTCTGT
TTCCTCCCTTATTTCCCTTTTGTGGTGGATTGGTGCCTAGATTCTGACGA
GTTCATCTCATCAATAAAAGAAACGCTGCCGCCATCTAGACACAGCGAAC
GGCGTAAGCCATAATTACGTCCCACAGACAGGTGCCAGCAGCCATGTACC
GCTACAGCGGCAACAACAGAGTACTGCTATCACCGGCGATCAACCGGTTG
ATACGACCCTAGCAGGTAGCCTTAGCATTCCAGGCGGCGTGCCCTCAAGC
ACCTCTCGAACAGAACGGTTTGTTGGAGACCTAAATCCAGAAGCTGTGAT
CCGGGAGAAACTGGACTCTGCCAACGCAAGCCATCTGCGGGATCGAATCG
GGCTCTGGATCAGCTCCTCGGAAGTTCATGGCCATAAGAAGCATGTGCCT
AATACTGACCATGAGTGGACCGGACACCGTCCCCCAAATGGGCCAGAGTT
ACCATCTGTCGCATCCGCGCTCAATCAACAATATTCATCTGGCATGGATG
CCTGTCGCCGTTTGCCCCCTTCTACCCGCCATCATCTGTTCTCAATTTAT
TTCAGCAAGGTCAACCATATCCTACCCCTAGTCGACCAGGCATCTTCAAC
CCAGGCCAACTCAGATAGCATTGCATCTGTTTTCCTGGAGAGAGCCATTT
GCCTTGTCGCTGCTAAAGATAGGGCGGCTGGTCCTCACCTTCGCTTCAGC
AATGATGGGCCTCTCATTTCCTCTCGTGTATTCTGCTCTAAGTTATATCA
GGGCTTGGTTGTCGCTTTGAACGTTGGGCTGGAATCTGATAGACTTTGTC
GTATCCGCATCTTGGCCCTTATGTCTCTGCATTGCGAGGGTTACGAAGGT
GCAGAGGCGGCGTCTATGCACCTCTGTCAGGCCATTCATCAAGCTCAAAC
GGTAGGCCTGCATTTGGACCGACCTGGTCGGACACCCGGCGATTCTCTAT
TTAATCTTTTCTGGTGCCTATGGGGCCTGGATAGGTTGCATGCCTGTATC
GGTGGTCGCCCAGTCATCCTCTCTGACTGCGATATTGGGATTGAGAAACC
GAAATTTCAGGATCTTTCTCCCAAATCCGCCTTTGATATCTGGTTTGCAA
TATCTGATCTACTGTCGACCGTGATCTCGCTTTATCGACCTTCATCGGAT
CATACGGTTGGATGGGAGGGGGAATTCCCTGCATTTGAAGGCATTACAGG
CGATAAACTGCGAGATGACCTGGACTTTGCTACACTAGGTATGTCTTCGA
TCCATCCATGTCTGAGAAGAAAAGGCACGGCATAGCTCAGAGGGAAAGGA
AAATGATCTGTCTTCCAGGACCGTTTGCTAATCACCGAAAGAAAAGGTTT
CCTTGAGCTGTACTATCATGCAGTTGCCATACTGTCATGCAGATACAAAG
TCACCCACCGGTCGGATGAGTCCAGGCCTTCGTATGTCCGCCAAGGTCTT
GCTGCCATCCGAATCCATTCCATTGTTGCTACCGAATGCTCCCATGAGTT
ACCGCCTTTGCCTATTGTTCCATACGCATTAGCACTTTCTATGGGTGTAT
CATATCAACAATTTCGCTCAAGTAAGCTCATCACGCATCTTGATCGATCC
CGGACCAGCCTGGAAGCTTGCTGTACTCTGCTCGAAGAACTGGGCGGGTT
CTGGTATTCTGCAGAAGCAACGGCGCGACTGGGTCGAAAAGCGTTGCGCC
AAATTGACGAGGCCGAGCTTGGACATCACCAACATGGCCGGGCTGCCAGT
CCTGCCACGCCCACAACTCAGAATCCGAGGGCGTTTCTCTCCCCGCCTCC
GGATTCGTCTCTCGATCCCGCCCAGGGCACTCTGAGTAACGTACGCAGTG
GCGTGACCTCGACTGCGCTAGGGCAGGAACTTCCGCCCCGGCCATTGTAT
TCGCAAGATATCAGTGCCCCAGACCCTGATCATGACAACTTTACGGATAT
TGACACGTTGTTTGGAGATTTCCTCGATCTCTCTTTGCCCACCAATTTCT
GGGACCCCTTGTTCATGACAGAGCCACCTCCCGGAACTTAG back to topCoding sequence (CDS) from alignment at An02:3574563..3576653- >CBS51388_002390-T1 ID=CBS51388_002390-T1|Name=CBS51388_002390-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5607bp|location=Sequence derived from alignment at An02:3574563..3576653- (Aspergillus niger CBS 513.88)
GTTTCCTTGAGCTGTACTATCATGCAGTTGCCATACTGTCATGCAGATAC
AAAGTCACCCACCGGTCGGATGAGTCCAGGCCTTCGTATGTCCGCCAAGG
TCTTGCTGCCATCCGAATCCATTCCATTGTTGCTACCGAATGCTCCCATG
AGTTACCGCCTTTGCCTATTGTTCCATACGCATTAGCACTTTCTATGGGT
GTATCATATCAACAATTTCGCTCAAGTAAGCTCATCACGCATCTTGATCG
ATCCCGGACCAGCCTGGAAGCTTGCTGTACTCTGCTCGAAGAACTGGGCG
GGTTCTGGTATTCTGCAGAAGCAACGGCGCGACTGGGTCGAAAAGCGTTG
CGCCAAATTGACGAGGCCGAGCTTGGACATCACCAACATGGCCGGGCTGC
CAGTCCTGCCACGCCCACAACTCAGAATCCGAGGGCGTTTCTCTCCCCGC
CTCCGGATTCGTCTCTCGATCCCGCCCAGGGCACTCTGAGTAACGTACGC
AGTGGCGTGACCTCGACTGCGCTAGGGCAGGAACTTCCGCCCCGGCCATT
GTATTCGCAAGATATCAGTGCCCCAGACCCTGATCATGACAACTTTACGG
ATATTGACACGTTGTTTGGAGATTTCCTCGATCTCTCTTTGCCCACCAAT
TTCTGGGACCCCTTGTTCATGACAGAGCCACCTCCCGGAACTTAGACACA
GCGAACGGCGTAAGCCATAATTACGTCCCACAGACAGGTGCCAGCAGCCA
TGTACCGCTACAGCGGCAACAACAGAGTACTGCTATCACCGGCGATCAAC
CGGTTGATACGACCCTAGCAGGTAGCCTTAGCATTCCAGGCGGCGTGCCC
TCAAGCACCTCTCGAACAGAACGGTTTGTTGGAGACCTAAATCCAGAAGC
TGTGATCCGGGAGAAACTGGACTCTGCCAACGCAAGCCATCTGCGGGATC
GAATCGGGCTCTGGATCAGCTCCTCGGAAGTTCATGGCCATAAGAAGCAT
GTGCCTAATACTGACCATGAGTGGACCGGACACCGTCCCCCAAATGGGCC
AGAGTTACCATCTGTCGCATCCGCGCTCAATCAACAATATTCATCTGGCA
TGGATGCCTGTCGCCGTTTGCCCCCTTCTACCCGCCATCATCTGTTCTCA
ATTTATTTCAGCAAGGTCAACCATATCCTACCCCTAGTCGACCAGGCATC
TTCAACCCAGGCCAACTCAGATAGCATTGCATCTGTTTTCCTGGAGAGAG
CCATTTGCCTTGTCGCTGCTAAAGATAGGGCGGCTGGTCCTCACCTTCGC
TTCAGCAATGATGGGCCTCTCATTTCCTCTCGTGTATTCTGCTCTAAGTT
ATATCAGGGCTTGGTTGTCGCTTTGAACGTTGGGCTGGAATCTGATAGAC
TTTGTCGTATCCGCATCTTGGCCCTTATGTCTCTGCATTGCGAGGGTTAC
GAAGGTGCAGAGGCGGCGTCTATGCACCTCTGTCAGGCCATTCATCAAGC
TCAAACGGTAGGCCTGCATTTGGACCGACCTGGTCGGACACCCGGCGATT
CTCTATTTAATCTTTTCTGGTGCCTATGGGGCCTGGATAGGTTGCATGCC
TGTATCGGTGGTCGCCCAGTCATCCTCTCTGACTGCGATATTGGGATTGA
GAAACCGAAATTTCAGGATCTTTCTCCCAAATCCGCCTTTGATATCTGGT
TTGCAATATCTGATCTACTGTCGACCGTGATCTCGCTTTATCGACCTTCA
TCGGATCATACGGTTGGATGGGAGGGGGAATTCCCTGCATTTGAAGGCAT
TACAGGCGATAAACTGCGAGATGACCTGGACTTTGCTACACTAGATGTGC
TACTTGCCAACGACGAAAGGTTTCCTTGAGCTGTACTATCATGCAGTTGC
CATACTGTCATGCAGATACAAAGTCACCCACCGGTCGGATGAGTCCAGGC
CTTCGTATGTCCGCCAAGGTCTTGCTGCCATCCGAATCCATTCCATTGTT
GCTACCGAATGCTCCCATGAGTTACCGCCTTTGCCTATTGTTCCATACGC
ATTAGCACTTTCTATGGGTGTATCATATCAACAATTTCGCTCAAGTAAGC
TCATCACGCATCTTGATCGATCCCGGACCAGCCTGGAAGCTTGCTGTACT
CTGCTCGAAGAACTGGGCGGGTTCTGGTATTCTGCAGAAGCAACGGCGCG
ACTGGGTCGAAAAGCGTTGCGCCAAATTGACGAGGCCGAGCTTGGACATC
ACCAACATGGCCGGGCTGCCAGTCCTGCCACGCCCACAACTCAGAATCCG
AGGGCGTTTCTCTCCCCGCCTCCGGATTCGTCTCTCGATCCCGCCCAGGG
CACTCTGAGTAACGTACGCAGTGGCGTGACCTCGACTGCGCTAGGGCAGG
AACTTCCGCCCCGGCCATTGTATTCGCAAGATATCAGTGCCCCAGACCCT
GATCATGACAACTTTACGGATATTGACACGTTGTTTGGAGATTTCCTCGA
TCTCTCTTTGCCCACCAATTTCTGGGACCCCTTGTTCATGACAGAGCCAC
CTCCCGGAACTTAGACACAGCGAACGGCGTAAGCCATAATTACGTCCCAC
AGACAGGTGCCAGCAGCCATGTACCGCTACAGCGGCAACAACAGAGTACT
GCTATCACCGGCGATCAACCGGTTGATACGACCCTAGCAGGTAGCCTTAG
CATTCCAGGCGGCGTGCCCTCAAGCACCTCTCGAACAGAACGGTTTGTTG
GAGACCTAAATCCAGAAGCTGTGATCCGGGAGAAACTGGACTCTGCCAAC
GCAAGCCATCTGCGGGATCGAATCGGGCTCTGGATCAGCTCCTCGGAAGT
TCATGGCCATAAGAAGCATGTGCCTAATACTGACCATGAGTGGACCGGAC
ACCGTCCCCCAAATGGGCCAGAGTTACCATCTGTCGCATCCGCGCTCAAT
CAACAATATTCATCTGGCATGGATGCCTGTCGCCGTTTGCCCCCTTCTAC
CCGCCATCATCTGTTCTCAATTTATTTCAGCAAGGTCAACCATATCCTAC
CCCTAGTCGACCAGGCATCTTCAACCCAGGCCAACTCAGATAGCATTGCA
TCTGTTTTCCTGGAGAGAGCCATTTGCCTTGTCGCTGCTAAAGATAGGGC
GGCTGGTCCTCACCTTCGCTTCAGCAATGATGGGCCTCTCATTTCCTCTC
GTGTATTCTGCTCTAAGTTATATCAGGGCTTGGTTGTCGCTTTGAACGTT
GGGCTGGAATCTGATAGACTTTGTCGTATCCGCATCTTGGCCCTTATGTC
TCTGCATTGCGAGGGTTACGAAGGTGCAGAGGCGGCGTCTATGCACCTCT
GTCAGGCCATTCATCAAGCTCAAACGGTAGGCCTGCATTTGGACCGACCT
GGTCGGACACCCGGCGATTCTCTATTTAATCTTTTCTGGTGCCTATGGGG
CCTGGATAGGTTGCATGCCTGTATCGGTGGTCGCCCAGTCATCCTCTCTG
ACTGCGATATTGGGATTGAGAAACCGAAATTTCAGGATCTTTCTCCCAAA
TCCGCCTTTGATATCTGGTTTGCAATATCTGATCTACTGTCGACCGTGAT
CTCGCTTTATCGACCTTCATCGGATCATACGGTTGGATGGGAGGGGGAAT
TCCCTGCATTTGAAGGCATTACAGGCGATAAACTGCGAGATGACCTGGAC
TTTGCTACACTAGATGTGCTACTTGCCAACGACGAAAGGTTTCCTTGAGC
TGTACTATCATGCAGTTGCCATACTGTCATGCAGATACAAAGTCACCCAC
CGGTCGGATGAGTCCAGGCCTTCGTATGTCCGCCAAGGTCTTGCTGCCAT
CCGAATCCATTCCATTGTTGCTACCGAATGCTCCCATGAGTTACCGCCTT
TGCCTATTGTTCCATACGCATTAGCACTTTCTATGGGTGTATCATATCAA
CAATTTCGCTCAAGTAAGCTCATCACGCATCTTGATCGATCCCGGACCAG
CCTGGAAGCTTGCTGTACTCTGCTCGAAGAACTGGGCGGGTTCTGGTATT
CTGCAGAAGCAACGGCGCGACTGGGTCGAAAAGCGTTGCGCCAAATTGAC
GAGGCCGAGCTTGGACATCACCAACATGGCCGGGCTGCCAGTCCTGCCAC
GCCCACAACTCAGAATCCGAGGGCGTTTCTCTCCCCGCCTCCGGATTCGT
CTCTCGATCCCGCCCAGGGCACTCTGAGTAACGTACGCAGTGGCGTGACC
TCGACTGCGCTAGGGCAGGAACTTCCGCCCCGGCCATTGTATTCGCAAGA
TATCAGTGCCCCAGACCCTGATCATGACAACTTTACGGATATTGACACGT
TGTTTGGAGATTTCCTCGATCTCTCTTTGCCCACCAATTTCTGGGACCCC
TTGTTCATGACAGAGCCACCTCCCGGAACTTAGACACAGCGAACGGCGTA
AGCCATAATTACGTCCCACAGACAGGTGCCAGCAGCCATGTACCGCTACA
GCGGCAACAACAGAGTACTGCTATCACCGGCGATCAACCGGTTGATACGA
CCCTAGCAGGTAGCCTTAGCATTCCAGGCGGCGTGCCCTCAAGCACCTCT
CGAACAGAACGGTTTGTTGGAGACCTAAATCCAGAAGCTGTGATCCGGGA
GAAACTGGACTCTGCCAACGCAAGCCATCTGCGGGATCGAATCGGGCTCT
GGATCAGCTCCTCGGAAGTTCATGGCCATAAGAAGCATGTGCCTAATACT
GACCATGAGTGGACCGGACACCGTCCCCCAAATGGGCCAGAGTTACCATC
TGTCGCATCCGCGCTCAATCAACAATATTCATCTGGCATGGATGCCTGTC
GCCGTTTGCCCCCTTCTACCCGCCATCATCTGTTCTCAATTTATTTCAGC
AAGGTCAACCATATCCTACCCCTAGTCGACCAGGCATCTTCAACCCAGGC
CAACTCAGATAGCATTGCATCTGTTTTCCTGGAGAGAGCCATTTGCCTTG
TCGCTGCTAAAGATAGGGCGGCTGGTCCTCACCTTCGCTTCAGCAATGAT
GGGCCTCTCATTTCCTCTCGTGTATTCTGCTCTAAGTTATATCAGGGCTT
GGTTGTCGCTTTGAACGTTGGGCTGGAATCTGATAGACTTTGTCGTATCC
GCATCTTGGCCCTTATGTCTCTGCATTGCGAGGGTTACGAAGGTGCAGAG
GCGGCGTCTATGCACCTCTGTCAGGCCATTCATCAAGCTCAAACGGTAGG
CCTGCATTTGGACCGACCTGGTCGGACACCCGGCGATTCTCTATTTAATC
TTTTCTGGTGCCTATGGGGCCTGGATAGGTTGCATGCCTGTATCGGTGGT
CGCCCAGTCATCCTCTCTGACTGCGATATTGGGATTGAGAAACCGAAATT
TCAGGATCTTTCTCCCAAATCCGCCTTTGATATCTGGTTTGCAATATCTG
ATCTACTGTCGACCGTGATCTCGCTTTATCGACCTTCATCGGATCATACG
GTTGGATGGGAGGGGGAATTCCCTGCATTTGAAGGCATTACAGGCGATAA
ACTGCGAGATGACCTGGACTTTGCTACACTAGATGTGCTACTTGCCAACG
ACGAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3574563..3576653 - |
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