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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3585687..3589081+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002394-T1 ID=CBS51388_002394-T1|Name=CBS51388_002394-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3395bp|location=Sequence derived from alignment at An02:3585687..3589081+ (Aspergillus niger CBS 513.88)
ATGGACAATGCCAACATTGGCGGACTAAGACACGGGCCAGGTAACACTTA
TCCTCAGGATGGACTGTCACACTCTCGGGGAGAAGTTGCTCAGTTCAACG
GCGCCAACGCACAAGATGGTCCTGTTCATGTTAATGGCGTCGAAAAGAAC
GCCAGTCAATCTCGAAGCGTTGAGGCAATTCCCTCAAATCATGCATCAAG
GGTAACCAAAGGACCGCCTGAATTGCCACATATTACACAAGGGTTTTTCC
CTTTCGCGAAGTTGGTCAATAGGTCCGTACAGCAGTGCTGGAACGATCTA
TCTGACTTAATCACTGAAATGGCGGAGATGCAGGTGAATTCTCATGGAAT
TCACCCCTCGACAGCTCCAACTACCGGAAAGTCGCCCGGAAATCAGTCCC
CTGGAAACATACGAAAGAAGCTTCGAATACTAGAATTTTCTCACGCTAAA
AGAGCCGAATTCATAAAGTTGCTCGTCCTCTCTCAATGGAGTCGACAAGC
GGCTGATGTTAGTAAATTGATCGACATTCAGAATTTCATTCGCACCCGGC
ATCAAGCTTACACGAATGCGCTGCAATGGGTCGGGGACATGAAAAGGGAC
CTCGTTCAGGCGCAGGTAGCAAATCCTGATCTGAAAACCGCACTAGAAGT
CTTGTCGAGGGGCAAGGTGGCGTCCATGTCCGATGTAAGCTTTGTTATCT
TCTAAAGTGTTGACAATTTATCTAATGTTCTTTCTGCGCCGAAATCCAGC
TCGGCTACAAACCTCCACGGCGCTTGACAGTCCGAGGAACGCTCAGGAAA
CTACAGAAAATCAATCGATTAATCGGTGCGCGACTCGTGGTGCAAGATGA
GATTCCTCCTCCATTCAAAAGTTACCGGGTCCATGACGGCCGGGTCACAT
TTGCCGTCCCTGGCGAATTCGAACTCGACCTTTCCATTGGCGAAGAGAAC
GAAAATTCGCAGTTTTTCTTTGTCGATATACGTTTCCTCTTCTCTCCTTC
ACCACCTATACTGAAGGGCCGATTATTAAACGAGCTCGAAATGACGATTA
ATGACGTCCTTCAAAATAGCGGCTTGACCGGGTGCTTCGACCTGTTACAT
AACCTGGTGTTAACCAATAAAATCAACATATTATTCAAGCAAGCTACCGA
GTTGGCCAGGAGTTCTTGGTCTGACGGCTTGCGGGTTGAGTTGTTGCACC
GAACACTCGTCGTCCAGTACTGGACACTGAAGCCTGGAACTAAAAGTTGG
CTTGAGATCGGAATCAAGAGCGGCCATCGCAAGTCAGACAGCGAAAGCCC
TGGGTTACCATCTTTGAAGTTCCGCTGGGTGAGGGATGGGGGCGAGGTGC
CATGTGAAGATATTGCTTTCGATGCAAAAAATCTCTCTATGGAGACTGTA
CTGCGAAGTGTCATCGCACTGCATGTCTCCCATACCCTTTCTTCGGCATA
CTGCAAGATAAGACAAAGCTCGCTTTTCTCGACTGGCTTCCTATCCTTGC
GTGCTCACCTAACAAGAACTGAGCCCGGTGATTGCCAACTCGATGTCCAG
CTCACTGAAACTAGGCATCTTCAAGTCTCTATTGAACCCATGTCCGGAGT
GAGTATCCTGTCAGCCAAACCGACTGTCTCGGACCGCTTTGATATGGAGC
GCAATCCTGAAAGATCCTCTGTTGAGGACATAGTCTCCCGTGTTGCTCGA
ATTCGCTGCAATGCAGCCATAGAGGAAATAGAATCCAAGGTCAAAATGCT
AGGATTCGAGCCACTCAATCCGAGGGCATGGAAACTTGACATTCGAAGGA
TCTTTCCACCAAATTTTCTACGCTTCACACTCTTTTCTCATCAGCTCTGG
GGGCGAAGTTGGATCGTGGCAGCAACTAGCAGCATGGATGGCGATTCTTG
GTGGGTCGTGCAACTTCGCCCAACGTTGCCTGCAAAGGGTCCTCCCATCC
CTCATGCAAATGGCTATGGCCAGCCTATTCTCCGTTCCGCTCAGGTTGTC
ACAGATTCATTCTTCCCCGCACGCTATGATATTGACGATGCGTACCTCGC
AAACCTTGGACACAGTCTTTCAGGAATTCTGGCTATCCAATCCAATGCAC
GCTACTTGTCGGACTTGCAGTCTATCAAGTTCCATCCTCCTCCGCATAAG
TTAAAGATCGAACCCGATCTCCGGGTCCCAGACATCCTTGTCCGGTACGA
TGTATCGACCCTTCCCAGTGTCTTTAGGGTAGCCATGCCCGCAAAGGCAA
AGAAGAAGAGTCTCATAAGAGATACCATTCGCCTTGCTTTCCATGGAGTT
GATCCCCGTGAGAAGTGCGCCATCATGGTAGCTTATGGCAACTTAGTCGA
CTCTACGGCTACTCTATGTCCACTTATCTCGAGCTGGGATCGCTCACTAG
TATTTCAAAAGGGAGGCACTGGCTTTGCGATGCGTTTGCTTGCACCTGCT
GGTCACCCGGTCATCGTCAGCCTTCTTGAGAATCTTCAGAGGCTTGAGTG
TGTGCTTTCAATTCTTGAAACACTGCAACGGAAGAAGGTAGAGATTCGGA
CCTTCTCTTTATCGAGTATATCCTTTATTTATGGTTCAGAGAGAGATCTT
GCGGCTAGCCTCAATATACATCTGTCAAGGAACGAATCTCTCATGAAGCT
CAGCCCTACCGACCTGGCATCTAGGCGCGAGTTCTTATTTGGTCTGCGTT
TAGGCATACAGTTCGGTCTCCAAAACCCGCACCGCCGGATCCAGGAATCC
CTTGCGTCCAGTCTGAACCGCTCTCCCACCGAGGCGGGACTTGAGACTGT
TGTTGAACTTCTCACGCTTACACTTCCCCTTATGAGGGCTTTGGACCAGC
TAATGGCCAATCCTTCACACAGCGGGCCTTTGAGACTGCACGTAACAGTG
CGCAACGCTAAGACGTACCAACTTCACTACCCTGGGGACGAGGCTCGATT
TCAATTGGTGGCTGCTTCGCACCAGAACCGGTTGGTTTGGGTACTCAAAG
ACGCGAACAGCCAAGGAAATAGTAAGAACGATGACAGTATCACAGCCAGA
CTCCGACAGACACTGTATACGTCGAAGGGCGATGGCTGGAAAGGACTTGA
AACTGGAGTCGTGGCAGAAGTCGATCAAGTCGGAAACCTTCTACGAGAAC
TTGAGAAGTGCTTTGTCGCCTCTCGGGCTGATCGGGCTGATCCCAAACAC
AAGCCCACCGATTATGCCGCCAATCACACTGGATTGAACAATCCAGAAAT
ATCGGCATTGGCAATCAAAAAAGGAACTACAGATGGTGCTAAACTTTCCC
TCTCAGACTCGCTTACAACCCTGCCGAACGACAAAGGCAATCTATCCCAG
GCAGACACGGCAGCGCAGAAAGAGGACATCATCATGATCGACTAA back to topCoding sequence (CDS) from alignment at An02:3585687..3589081+ >CBS51388_002394-T1 ID=CBS51388_002394-T1|Name=CBS51388_002394-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6660bp|location=Sequence derived from alignment at An02:3585687..3589081+ (Aspergillus niger CBS 513.88)
ATGGACAATGCCAACATTGGCGGACTAAGACACGGGCCAGGTAACACTTA
TCCTCAGGATGGACTGTCACACTCTCGGGGAGAAGTTGCTCAGTTCAACG
GCGCCAACGCACAAGATGGTCCTGTTCATGTTAATGGCGTCGAAAAGAAC
GCCAGTCAATCTCGAAGCGTTGAGGCAATTCCCTCAAATCATGCATCAAG
GGTAACCAAAGGACCGCCTGAATTGCCACATATTACACAAGGGTTTTTCC
CTTTCGCGAAGTTGGTCAATAGGTCCGTACAGCAGTGCTGGAACGATCTA
TCTGACTTAATCACTGAAATGGCGGAGATGCAGGTGAATTCTCATGGAAT
TCACCCCTCGACAGCTCCAACTACCGGAAAGTCGCCCGGAAATCAGTCCC
CTGGAAACATACGAAAGAAGCTTCGAATACTAGAATTTTCTCACGCTAAA
AGAGCCGAATTCATAAAGTTGCTCGTCCTCTCTCAATGGAGTCGACAAGC
GGCTGATGTTAGTAAATTGATCGACATTCAGAATTTCATTCGCACCCGGC
ATCAAGCTTACACGAATGCGCTGCAATGGGTCGGGGACATGAAAAGGGAC
CTCGTTCAGGCGCAGGTAGCAAATCCTGATCTGAAAACCGCACTAGAAGT
CTTGTCGAGGGGCAAGGTGGCGTCCATGTCCGATCTCGGCTACAAACCTC
CACGGCGCTTGACAGTCCGAGGAACGCTCAGGAAACTACAGAAAATCAAT
CGATTAATCGGTGCGCGACTCGTGGTGCAAGATGAGATTCCTCCTCCATT
CAAAAGTTACCGGGTCCATGACGGCCGGGTCACATTTGCCGTCCCTGGCG
AATTCGAACTCGACCTTTCCATTGGCGAAGAGAACGAAAATTCGCAGTTT
TTCTTTGTCGATATACGTTTCCTCTTCTCTCCTTCACCACCTATACTGAA
GGGCCGATTATTAAACGAGCTCGAAATGACGATTAATGACGTCCTTCAAA
ATAGCGGCTTGACCGGGTGCTTCGACCTGTTACATAACCTGGTGTTAACC
AATAAAATCAACATATTATTCAAGCAAGCTACCGAGTTGGCCAGGAGTTC
TTGGTCTGACGGCTTGCGGGTTGAGTTGTTGCACCGAACACTCGTCGTCC
AGTACTGGACACTGAAGCCTGGAACTAAAAGTTGGCTTGAGATCGGAATC
AAGAGCGGCCATCGCAAGTCAGACAGCGAAAGCCCTGGGTTACCATCTTT
GAAGTTCCGCTGGGTGAGGGATGGGGGCGAGGTGCCATGTGAAGATATTG
CTTTCGATGCAAAAAATCTCTCTATGGAGACTGTACTGCGAAGTGTCATC
GCACTGCATGTCTCCCATACCCTTTCTTCGGCATACTGCAAGATAAGACA
AAGCTCGCTTTTCTCGACTGGCTTCCTATCCTTGCGTGCTCACCTAACAA
GAACTGAGCCCGGTGATTGCCAACTCGATGTCCAGCTCACTGAAACTAGG
CATCTTCAAGTCTCTATTGAACCCATGTCCGGAGTGAGTATCCTGTCAGC
CAAACCGACTGTCTCGGACCGCTTTGATATGGAGCGCAATCCTGAAAGAT
CCTCTGTTGAGGACATAGTCTCCCGTGTTGCTCGAATTCGCTGCAATGCA
GCCATAGAGGAAATAGAATCCAAGGTCAAAATGCTAGGATTCGAGCCACT
CAATCCGAGGGCATGGAAACTTGACATTCGAAGGATCTTTCCACCAAATT
TTCTACGCTTCACACTCTTTTCTCATCAGCTCTGGGGGCGAAGTTGGATC
GTGGCAGCAACTAGCAGCATGGATGGCGATTCTTGGTGGGTCGTGCAACT
TCGCCCAACGTTGCCTGCAAAGGGTCCTCCCATCCCTCATGCAAATGGCT
ATGGCCAGCCTATTCTCCGTTCCGCTCAGGTTGTCACAGATTCATTCTTC
CCCGCACGCTATGATATTGACGATGCGTACCTCGCAAACCTTGGACACAG
TCTTTCAGGAATTCTGGCTATCCAATCCAATGCACGCTACTTGTCGGACT
TGCAGTCTATCAAGTTCCATCCTCCTCCGCATAAGTTAAAGATCGAACCC
GATCTCCGGGTCCCAGACATCCTTGTCCGGTACGATGTATCGACCCTTCC
CAGTGTCTTTAGGGTAGCCATGCCCGCAAAGGCAAAGAAGAAGAGTCTCA
TAAGAGATACCATTCGCCTTGCTTTCCATGGAGTTGATCCCCGTGAGAAG
TGCGCCATCATGGTAGCTTATGGCAACTTAGTCGACTCTACGGCTACTCT
ATGTCCACTTATCTCGAGCTGGGATCGCTCACTAGTATTTCAAAAGGGAG
GCACTGGCTTTGCGATGCGTTTGCTTGCACCTGCTGGTCACCCGGTCATC
GTCAGCCTTCTTGAGAATCTTCAGAGGCTTGAGTGTGTGCTTTCAATTCT
TGAAACACTGCAACGGAAGAAGGTAGAGATTCGGACCTTCTCTTTATCGA
GTATATCCTTTATTTATGGTTCAGAGAGAGATCTTGCGGCTAGCCTCAAT
ATACATCTGTCAAGGAACGAATCTCTCATGAAGCTCAGCCCTACCGACCT
GGCATCTAGGCGCGAGTTCTTATTTGGTCTGCGTTTAGGCATACAGTTCG
GTCTCCAAAACCCGCACCGCCGGATCCAGGAATCCCTTGCGTCCAGTCTG
AACCGCTCTCCCACCGAGGCGGGACTTGAGACTGTTGTTGAACTTCTCAC
GCTTACACTTCCCCTTATGAGGGCTTTGGACCAGCTAATGGCCAATCCTT
CACACAGCGGGCCTTTGAGACTGCACGTAACAGTGCGCAACGCTAAGACG
TACCAACTTCACTACCCTGGGGACGAGGCTCGATTTCAATTGGTGGCTGC
TTCGCACCAGAACCGGTTGGTTTGGGTACTCAAAGACGCGAACAGCCAAG
GAAATAGTAAGAACGATGACAGTATCACAGCCAGACTCCGACAGACACTG
TATACGTCGAAGGGCGATGGCTGGAAAGGACTTGAAACTGGAGTCGTGGC
AGAAGTCGATCAAGTCGGAAACCTTCTACGAGAACTTGAGAAGTGCTTTG
TCGCCTCTCGGGCTGATCGGGCTGATCCCAAACACAAGCCCACCGATTAT
GCCGCCAATCACACTGGATTGAACAATCCAGAAATATCGGCATTGGCAAT
CAAAAAAGGAACTACAGATGGTGCTAAACTTTCCCTCTCAGACTCGCTTA
CAACCCTGCCGAACGACAAAGGCAATCTATCCCAGGCAGACACGGCAGCG
CAGAAAGAGGACATCATCATGATCGACTAAATGGACAATGCCAACATTGG
CGGACTAAGACACGGGCCAGGTAACACTTATCCTCAGGATGGACTGTCAC
ACTCTCGGGGAGAAGTTGCTCAGTTCAACGGCGCCAACGCACAAGATGGT
CCTGTTCATGTTAATGGCGTCGAAAAGAACGCCAGTCAATCTCGAAGCGT
TGAGGCAATTCCCTCAAATCATGCATCAAGGGTAACCAAAGGACCGCCTG
AATTGCCACATATTACACAAGGGTTTTTCCCTTTCGCGAAGTTGGTCAAT
AGGTCCGTACAGCAGTGCTGGAACGATCTATCTGACTTAATCACTGAAAT
GGCGGAGATGCAGGTGAATTCTCATGGAATTCACCCCTCGACAGCTCCAA
CTACCGGAAAGTCGCCCGGAAATCAGTCCCCTGGAAACATACGAAAGAAG
CTTCGAATACTAGAATTTTCTCACGCTAAAAGAGCCGAATTCATAAAGTT
GCTCGTCCTCTCTCAATGGAGTCGACAAGCGGCTGATGTTAGTAAATTGA
TCGACATTCAGAATTTCATTCGCACCCGGCATCAAGCTTACACGAATGCG
CTGCAATGGGTCGGGGACATGAAAAGGGACCTCGTTCAGGCGCAGGTAGC
AAATCCTGATCTGAAAACCGCACTAGAAGTCTTGTCGAGGGGCAAGGTGG
CGTCCATGTCCGATCTCGGCTACAAACCTCCACGGCGCTTGACAGTCCGA
GGAACGCTCAGGAAACTACAGAAAATCAATCGATTAATCGGTGCGCGACT
CGTGGTGCAAGATGAGATTCCTCCTCCATTCAAAAGTTACCGGGTCCATG
ACGGCCGGGTCACATTTGCCGTCCCTGGCGAATTCGAACTCGACCTTTCC
ATTGGCGAAGAGAACGAAAATTCGCAGTTTTTCTTTGTCGATATACGTTT
CCTCTTCTCTCCTTCACCACCTATACTGAAGGGCCGATTATTAAACGAGC
TCGAAATGACGATTAATGACGTCCTTCAAAATAGCGGCTTGACCGGGTGC
TTCGACCTGTTACATAACCTGGTGTTAACCAATAAAATCAACATATTATT
CAAGCAAGCTACCGAGTTGGCCAGGAGTTCTTGGTCTGACGGCTTGCGGG
TTGAGTTGTTGCACCGAACACTCGTCGTCCAGTACTGGACACTGAAGCCT
GGAACTAAAAGTTGGCTTGAGATCGGAATCAAGAGCGGCCATCGCAAGTC
AGACAGCGAAAGCCCTGGGTTACCATCTTTGAAGTTCCGCTGGGTGAGGG
ATGGGGGCGAGGTGCCATGTGAAGATATTGCTTTCGATGCAAAAAATCTC
TCTATGGAGACTGTACTGCGAAGTGTCATCGCACTGCATGTCTCCCATAC
CCTTTCTTCGGCATACTGCAAGATAAGACAAAGCTCGCTTTTCTCGACTG
GCTTCCTATCCTTGCGTGCTCACCTAACAAGAACTGAGCCCGGTGATTGC
CAACTCGATGTCCAGCTCACTGAAACTAGGCATCTTCAAGTCTCTATTGA
ACCCATGTCCGGAGTGAGTATCCTGTCAGCCAAACCGACTGTCTCGGACC
GCTTTGATATGGAGCGCAATCCTGAAAGATCCTCTGTTGAGGACATAGTC
TCCCGTGTTGCTCGAATTCGCTGCAATGCAGCCATAGAGGAAATAGAATC
CAAGGTCAAAATGCTAGGATTCGAGCCACTCAATCCGAGGGCATGGAAAC
TTGACATTCGAAGGATCTTTCCACCAAATTTTCTACGCTTCACACTCTTT
TCTCATCAGCTCTGGGGGCGAAGTTGGATCGTGGCAGCAACTAGCAGCAT
GGATGGCGATTCTTGGTGGGTCGTGCAACTTCGCCCAACGTTGCCTGCAA
AGGGTCCTCCCATCCCTCATGCAAATGGCTATGGCCAGCCTATTCTCCGT
TCCGCTCAGGTTGTCACAGATTCATTCTTCCCCGCACGCTATGATATTGA
CGATGCGTACCTCGCAAACCTTGGACACAGTCTTTCAGGAATTCTGGCTA
TCCAATCCAATGCACGCTACTTGTCGGACTTGCAGTCTATCAAGTTCCAT
CCTCCTCCGCATAAGTTAAAGATCGAACCCGATCTCCGGGTCCCAGACAT
CCTTGTCCGGTACGATGTATCGACCCTTCCCAGTGTCTTTAGGGTAGCCA
TGCCCGCAAAGGCAAAGAAGAAGAGTCTCATAAGAGATACCATTCGCCTT
GCTTTCCATGGAGTTGATCCCCGTGAGAAGTGCGCCATCATGGTAGCTTA
TGGCAACTTAGTCGACTCTACGGCTACTCTATGTCCACTTATCTCGAGCT
GGGATCGCTCACTAGTATTTCAAAAGGGAGGCACTGGCTTTGCGATGCGT
TTGCTTGCACCTGCTGGTCACCCGGTCATCGTCAGCCTTCTTGAGAATCT
TCAGAGGCTTGAGTGTGTGCTTTCAATTCTTGAAACACTGCAACGGAAGA
AGGTAGAGATTCGGACCTTCTCTTTATCGAGTATATCCTTTATTTATGGT
TCAGAGAGAGATCTTGCGGCTAGCCTCAATATACATCTGTCAAGGAACGA
ATCTCTCATGAAGCTCAGCCCTACCGACCTGGCATCTAGGCGCGAGTTCT
TATTTGGTCTGCGTTTAGGCATACAGTTCGGTCTCCAAAACCCGCACCGC
CGGATCCAGGAATCCCTTGCGTCCAGTCTGAACCGCTCTCCCACCGAGGC
GGGACTTGAGACTGTTGTTGAACTTCTCACGCTTACACTTCCCCTTATGA
GGGCTTTGGACCAGCTAATGGCCAATCCTTCACACAGCGGGCCTTTGAGA
CTGCACGTAACAGTGCGCAACGCTAAGACGTACCAACTTCACTACCCTGG
GGACGAGGCTCGATTTCAATTGGTGGCTGCTTCGCACCAGAACCGGTTGG
TTTGGGTACTCAAAGACGCGAACAGCCAAGGAAATAGTAAGAACGATGAC
AGTATCACAGCCAGACTCCGACAGACACTGTATACGTCGAAGGGCGATGG
CTGGAAAGGACTTGAAACTGGAGTCGTGGCAGAAGTCGATCAAGTCGGAA
ACCTTCTACGAGAACTTGAGAAGTGCTTTGTCGCCTCTCGGGCTGATCGG
GCTGATCCCAAACACAAGCCCACCGATTATGCCGCCAATCACACTGGATT
GAACAATCCAGAAATATCGGCATTGGCAATCAAAAAAGGAACTACAGATG
GTGCTAAACTTTCCCTCTCAGACTCGCTTACAACCCTGCCGAACGACAAA
GGCAATCTATCCCAGGCAGACACGGCAGCGCAGAAAGAGGACATCATCAT
GATCGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260NAN |
| DBxref | InterPro:IPR013947 |
| DBxref | PFAM:PF08638 |
| Product | mediator complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3585687..3589081 + |
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