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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3592381..3593806+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002396-T1 ID=CBS51388_002396-T1|Name=CBS51388_002396-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1426bp|location=Sequence derived from alignment at An02:3592381..3593806+ (Aspergillus niger CBS 513.88)
ATGGAACCAAGTACATCCCTGAATGACGATAGTACGAAGACTCAACCATC
CTTGGACGACCTTATCAAGCAAGCTGCCGCCAAAGATGCCATCAAGGATT
ACAACGCCGCTGCAGAGCTGTACTCTGAGGCCACGGAACTTCAAGCAGAG
CTTAACGGAGAATTAGCGCTCGAAAATGCAGACTTACTATTCGCTTACGG
AAAAGCCCTCTACAACGTTGCCGTCAGCAAGAGCGATGTGCTTGGGTCCA
AGGTAGCTGGAGAATCACAGCCGAGCAGCACGTCTATTGAGAGGCCATCC
GCTGCGGCAACAGCCACAACCGCAGGCATCGTTGAGAAAGCTGTAGCCCA
GAGCCCACCCGAGAGATCCTCAGGAGCCCAGAAGACAAATACTGGTGATG
TTCCAGCTAAGCCGTACTTCCAATTTACTGGTGACGAAAACTTTGACGAC
TCGGATTCGGAAGACGAGGCCGACGGCGAGGAAGCTGCGGCCGATGACGA
AGACGACTTTGCCAATGCCTTTGAAGTTCTTGACTTGGCACGTGTACTAT
ACCACAAAAAGATGACTACGATAGAGGAAGGAATTGGCAAAGGGAAATCC
GCAGGTTTACCTCCAGATCTCAAACACGTCAAGGAACGTCTCGCGGATAC
CTACGATTTACAAGCCGAGATCTCACTGGAGGCAGAAAGGTTCAAAGACG
CGGTGACGGACTTGAGGACGTCTCTAGAATTAAGGCAGTCTCTGTTTCCG
ATGGAGGATCCTTCTGTTGCAGAATGTCACTACAAGCTTTCCCTTGCTCT
AGAATTTGGCTCCGTCAAGAATGAGAATGACAACTCCCAAGAGGACACCA
GCCCCAAAGAGCCGGTCGACGAGGAAATGAGGAAAGAGGCCGCAGCTCAA
ATGGAAAAGGCTATTGAAAGTTGCCGTCTAAGGATGGATCAAGAACAGAA
GAAGTTGGTCGACGATAGTTCGTTGGATGAGGACAGGGTGACCGCTATGA
AGAGAAGAATAGCAAATGTCAAAGACATTATAGCTGACATGGAGCAAAGG
GTAAGCAACGACCTTCTTTCCAAATCTCTTTAACGCGATCCCTTCCTACT
ATGTTTGCTTCGGCTACAGTTACTGAGAACGTTGACAGCTCGTCGATCTT
CGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGCAGACAACACGGT
GCTGAAGGGTATTTTGGGTCAGATTATGGGGCATTCCCCTTCGGAGCAAA
AGGCTCATCTCGATGCTGTCACGAGAGAAGCAAATGACCTTTCTGCGTTC
ATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAAGAGTGACACTGT
AGCAAAACGATCGGCTCCGGAAGATGGCGCGGGAGGCGATACAAAGAGAG
CACGAGCAGGCGATGAACTTGAATGA back to topCoding sequence (CDS) from alignment at An02:3592381..3593806+ >CBS51388_002396-T1 ID=CBS51388_002396-T1|Name=CBS51388_002396-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2676bp|location=Sequence derived from alignment at An02:3592381..3593806+ (Aspergillus niger CBS 513.88)
ATGGAACCAAGTACATCCCTGAATGACGATAGTACGAAGACTCAACCATC
CTTGGACGACCTTATCAAGCAAGCTGCCGCCAAAGATGCCATCAAGGATT
ACAACGCCGCTGCAGAGCTGTACTCTGAGGCCACGGAACTTCAAGCAGAG
CTTAACGGAGAATTAGCGCTCGAAAATGCAGACTTACTATTCGCTTACGG
AAAAGCCCTCTACAACGTTGCCGTCAGCAAGAGCGATGTGCTTGGGTCCA
AGGTAGCTGGAGAATCACAGCCGAGCAGCACGTCTATTGAGAGGCCATCC
GCTGCGGCAACAGCCACAACCGCAGGCATCGTTGAGAAAGCTGTAGCCCA
GAGCCCACCCGAGAGATCCTCAGGAGCCCAGAAGACAAATACTGGTGATG
TTCCAGCTAAGCCGTACTTCCAATTTACTGGTGACGAAAACTTTGACGAC
TCGGATTCGGAAGACGAGGCCGACGGCGAGGAAGCTGCGGCCGATGACGA
AGACGACTTTGCCAATGCCTTTGAAGTTCTTGACTTGGCACGTGTACTAT
ACCACAAAAAGATGACTACGATAGAGGAAGGAATTGGCAAAGGGAAATCC
GCAGGTTTACCTCCAGATCTCAAACACGTCAAGGAACGTCTCGCGGATAC
CTACGATTTACAAGCCGAGATCTCACTGGAGGCAGAAAGGTTCAAAGACG
CGGTGACGGACTTGAGGACGTCTCTAGAATTAAGGCAGTCTCTGTTTCCG
ATGGAGGATCCTTCTGTTGCAGAATGTCACTACAAGCTTTCCCTTGCTCT
AGAATTTGGCTCCGTCAAGAATGAGAATGACAACTCCCAAGAGGACACCA
GCCCCAAAGAGCCGGTCGACGAGGAAATGAGGAAAGAGGCCGCAGCTCAA
ATGGAAAAGGCTATTGAAAGTTGCCGTCTAAGGATGGATCAAGAACAGAA
GAAGTTGGTCGACGATAGTTCGTTGGATGAGGACAGGGTGACCGCTATGA
AGAGAAGAATAGCAAATGTCAAAGACATTATAGCTGACATGGAGCAAAGG
CTCGTCGATCTTCGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGC
AGACAACACGGTGCTGAAGGGTATTTTGGGTCAGATTATGGGGCATTCCC
CTTCGGAGCAAAAGGCTCATCTCGATGCTGTCACGAGAGAAGCAAATGAC
CTTTCTGCGTTCATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAA
GAGTGACACTGTAGCAAAACGATCGGCTCCGGAAGATGGCGCGGGAGGCG
ATACAAAGAGAGCACGAGCAGGCGATGAACTTGAATGAATGGAACCAAGT
ACATCCCTGAATGACGATAGTACGAAGACTCAACCATCCTTGGACGACCT
TATCAAGCAAGCTGCCGCCAAAGATGCCATCAAGGATTACAACGCCGCTG
CAGAGCTGTACTCTGAGGCCACGGAACTTCAAGCAGAGCTTAACGGAGAA
TTAGCGCTCGAAAATGCAGACTTACTATTCGCTTACGGAAAAGCCCTCTA
CAACGTTGCCGTCAGCAAGAGCGATGTGCTTGGGTCCAAGGTAGCTGGAG
AATCACAGCCGAGCAGCACGTCTATTGAGAGGCCATCCGCTGCGGCAACA
GCCACAACCGCAGGCATCGTTGAGAAAGCTGTAGCCCAGAGCCCACCCGA
GAGATCCTCAGGAGCCCAGAAGACAAATACTGGTGATGTTCCAGCTAAGC
CGTACTTCCAATTTACTGGTGACGAAAACTTTGACGACTCGGATTCGGAA
GACGAGGCCGACGGCGAGGAAGCTGCGGCCGATGACGAAGACGACTTTGC
CAATGCCTTTGAAGTTCTTGACTTGGCACGTGTACTATACCACAAAAAGA
TGACTACGATAGAGGAAGGAATTGGCAAAGGGAAATCCGCAGGTTTACCT
CCAGATCTCAAACACGTCAAGGAACGTCTCGCGGATACCTACGATTTACA
AGCCGAGATCTCACTGGAGGCAGAAAGGTTCAAAGACGCGGTGACGGACT
TGAGGACGTCTCTAGAATTAAGGCAGTCTCTGTTTCCGATGGAGGATCCT
TCTGTTGCAGAATGTCACTACAAGCTTTCCCTTGCTCTAGAATTTGGCTC
CGTCAAGAATGAGAATGACAACTCCCAAGAGGACACCAGCCCCAAAGAGC
CGGTCGACGAGGAAATGAGGAAAGAGGCCGCAGCTCAAATGGAAAAGGCT
ATTGAAAGTTGCCGTCTAAGGATGGATCAAGAACAGAAGAAGTTGGTCGA
CGATAGTTCGTTGGATGAGGACAGGGTGACCGCTATGAAGAGAAGAATAG
CAAATGTCAAAGACATTATAGCTGACATGGAGCAAAGGCTCGTCGATCTT
CGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGCAGACAACACGGT
GCTGAAGGGTATTTTGGGTCAGATTATGGGGCATTCCCCTTCGGAGCAAA
AGGCTCATCTCGATGCTGTCACGAGAGAAGCAAATGACCTTTCTGCGTTC
ATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAAGAGTGACACTGT
AGCAAAACGATCGGCTCCGGAAGATGGCGCGGGAGGCGATACAAAGAGAG
CACGAGCAGGCGATGAACTTGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019544 |
| DBxref | InterPro:IPR011990 |
| DBxref | PFAM:PF10516 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3592381..3593806 + |
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