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CBS51388_002399-T1, CBS51388_002399-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002399-T1
Unique NameCBS51388_002399-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:3603807..3605593+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002399-T1 ID=CBS51388_002399-T1|Name=CBS51388_002399-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1787bp|location=Sequence derived from alignment at An02:3603807..3605593+ (Aspergillus niger CBS 513.88)
ATGCCTACGGTACATCTGCTAGATTACGTCGCCGGAAATGTCCGCTCCCT
GGTCAATGCGATCAACAAAGTCGGCTATGAGGTGGAATGGATTAAGTCTC
CAAGTGATCTGAAGAATGCAGAGGTAAAACAAAGTGATATTACAAACCAC
ACAATGTTGCGCTAACTGTTTAACAGAAGCTCATCCTACCAGGTGTCGGT
CATTTCGGCCATTGCTTATCTCAACTTTCAGAGGGAGGCTACTTGGATCC
GATCAGGCAACACATAGCTTCCGGGAAGCCATTCATGGGAATTTGTGTTG
GTCTACAATCACTTTTTGAAGGGTCTGAGGAGGACTCAGATGTTCCGGGG
CTGGGATTGATTCCGATGCGGATGCAGAAATTCAATCCCGACACTAAGAG
TGTACCCCACATAGGCTGGAACTCTGCTATAGACACCAAAATTGGGTCTG
CGGATAGTCAGAGCTTCTACGGATTAGTCCCAAGCAGCAAATACTACTAC
GTCCACTCCTACGCAGCTCTCTACACCCCAGGGCTCCTTGAGAAGGATGG
CTGGTCAGTCGCCACAGCTACTTACGGCGAAGAAGAATTTGTCGGTGCTA
TTGCACGAGAGAATGTCTTCGCGACTCAGTTCCACCCGGAGAAAAGTGGC
CAGGCTGGATTACGGACTATTAGCGCCTTCCTAAATGGTGATCGCTTTCA
AATGCTTACCCCGCAAGCGTCGCTCTCCTTGGACAAAAAAGATGGGCTGA
CACGTAGAATCATTGCCTGTCTTGATGTTCGCACCAATGATTCTGGTGAT
CTCGTCGTCACGAAAGGGGACCAGTATGATGTTCGTGAAAAGGACGGGGT
AGATACAGGAGGCCAAGTCAGAAACTTAGGGAAGCCCGTGGACATGGCCA
AGAAGTACTACGAACAAGGGGCTGATGAGGTGACGTTCTTGAACATCACT
TCCTTCAGAAACTGTCCTGTTGCAGATGCTCCCATGCTGGAAATCCTCAG
GAGGACCTCAGAAACTGTCTTCGTACCGCTGACTATCGGGGGCGGTATCA
AGGACACTATTGACACAGATGGCACTCACGTCTCAGCCCTTGATGTTGCG
ACAATGTATTTCAAGTCTGGTGCCGATAAAGTCAGCATCGGTTCGGATGC
TGTTATCGCAGCAGAGGAGTATTATGAAGGGGGCGAAAAGCTGACTGGCA
AGACGGCTATAGAATCTATATCAAAAGCATATGGTAACCAGGCTGTGGTC
GTGAGTGTGGATCCTAAACGTGTCTATGTGGACGGGCCAGAAGATACCAA
CCATCATACAATCCGGACAAAGTACCCGAATGCTGCTGGCCAGACGTTTT
GCTGGTACCAATGCACTATCAAGGGTGGCAGAGAGTCTCGAGACCTCGAC
GTCCGGCAACTAGCGAAGGCGGTTGAAGCAATGGGTGCTGGTGAACTCTT
GCTAAATTGCATCGACAAGGACGGAAGCAACAGCGGATTTGATCTGGAAT
TGATCAGTGATGTGAAAGCCGCCATTAAGATACCAGTGATTGCCTCCAGC
GGTGCTGGAAACCCCGAACATTTTGCAGAAGTCTTCCAAAATACTACGAC
TGATGCCGCCCTAGGCGCTGGCATGGTAAGTAATAATTTCGTTCAAACCG
GTCGAGAACCCGTTTAGTTGGCTAATTTCTTATCTAAACTTTCACAGTTC
CACCGAGGTGAATATACTGTCAGCGATGTCAAACGTCACTTGGACAATGG
AGGATTTCTCGTCCGCAGGCCTGAAGTGGGCAATTAA
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Coding sequence (CDS) from alignment at An02:3603807..3605593+

>CBS51388_002399-T1 ID=CBS51388_002399-T1|Name=CBS51388_002399-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4986bp|location=Sequence derived from alignment at An02:3603807..3605593+ (Aspergillus niger CBS 513.88)
ATGCCTACGGTACATCTGCTAGATTACGTCGCCGGAAATGTCCGCTCCCT
GGTCAATGCGATCAACAAAGTCGGCTATGAGGTGGAATGGATTAAGTCTC
CAAGTGATCTGAAGAATGCAGAGAAGCTCATCCTACCAGGTGTCGGTCAT
TTCGGCCATTGCTTATCTCAACTTTCAGAGGGAGGCTACTTGGATCCGAT
CAGGCAACACATAGCTTCCGGGAAGCCATTCATGGGAATTTGTGTTGGTC
TACAATCACTTTTTGAAGGGTCTGAGGAGGACTCAGATGTTCCGGGGCTG
GGATTGATTCCGATGCGGATGCAGAAATTCAATCCCGACACTAAGAGTGT
ACCCCACATAGGCTGGAACTCTGCTATAGACACCAAAATTGGGTCTGCGG
ATAGTCAGAGCTTCTACGGATTAGTCCCAAGCAGCAAATACTACTACGTC
CACTCCTACGCAGCTCTCTACACCCCAGGGCTCCTTGAGAAGGATGGCTG
GTCAGTCGCCACAGCTACTTACGGCGAAGAAGAATTTGTCGGTGCTATTG
CACGAGAGAATGTCTTCGCGACTCAGTTCCACCCGGAGAAAAGTGGCCAG
GCTGGATTACGGACTATTAGCGCCTTCCTAAATGGTGATCGCTTTCAAAT
GCTTACCCCGCAAGCGTCGCTCTCCTTGGACAAAAAAGATGGGCTGACAC
GTAGAATCATTGCCTGTCTTGATGTTCGCACCAATGATTCTGGTGATCTC
GTCGTCACGAAAGGGGACCAGTATGATGTTCGTGAAAAGGACGGGGTAGA
TACAGGAGGCCAAGTCAGAAACTTAGGGAAGCCCGTGGACATGGCCAAGA
AGTACTACGAACAAGGGGCTGATGAGGTGACGTTCTTGAACATCACTTCC
TTCAGAAACTGTCCTGTTGCAGATGCTCCCATGCTGGAAATCCTCAGGAG
GACCTCAGAAACTGTCTTCGTACCGCTGACTATCGGGGGCGGTATCAAGG
ACACTATTGACACAGATGGCACTCACGTCTCAGCCCTTGATGTTGCGACA
ATGTATTTCAAGTCTGGTGCCGATAAAGTCAGCATCGGTTCGGATGCTGT
TATCGCAGCAGAGGAGTATTATGAAGGGGGCGAAAAGCTGACTGGCAAGA
CGGCTATAGAATCTATATCAAAAGCATATGGTAACCAGGCTGTGGTCGTG
AGTGTGGATCCTAAACGTGTCTATGTGGACGGGCCAGAAGATACCAACCA
TCATACAATCCGGACAAAGTACCCGAATGCTGCTGGCCAGACGTTTTGCT
GGTACCAATGCACTATCAAGGGTGGCAGAGAGTCTCGAGACCTCGACGTC
CGGCAACTAGCGAAGGCGGTTGAAGCAATGGGTGCTGGTGAACTCTTGCT
AAATTGCATCGACAAGGACGGAAGCAACAGCGGATTTGATCTGGAATTGA
TCAGTGATGTGAAAGCCGCCATTAAGATACCAGTGATTGCCTCCAGCGGT
GCTGGAAACCCCGAACATTTTGCAGAAGTCTTCCAAAATACTACGACTGA
TGCCGCCCTAGGCGCTGGCATGTTCCACCGAGGTGAATATACTGTCAGCG
ATGTCAAACGTCACTTGGACAATGGAGGATTTCTCGTCCGCAGGCCTGAA
GTGGGCAATTAAATGCCTACGGTACATCTGCTAGATTACGTCGCCGGAAA
TGTCCGCTCCCTGGTCAATGCGATCAACAAAGTCGGCTATGAGGTGGAAT
GGATTAAGTCTCCAAGTGATCTGAAGAATGCAGAGAAGCTCATCCTACCA
GGTGTCGGTCATTTCGGCCATTGCTTATCTCAACTTTCAGAGGGAGGCTA
CTTGGATCCGATCAGGCAACACATAGCTTCCGGGAAGCCATTCATGGGAA
TTTGTGTTGGTCTACAATCACTTTTTGAAGGGTCTGAGGAGGACTCAGAT
GTTCCGGGGCTGGGATTGATTCCGATGCGGATGCAGAAATTCAATCCCGA
CACTAAGAGTGTACCCCACATAGGCTGGAACTCTGCTATAGACACCAAAA
TTGGGTCTGCGGATAGTCAGAGCTTCTACGGATTAGTCCCAAGCAGCAAA
TACTACTACGTCCACTCCTACGCAGCTCTCTACACCCCAGGGCTCCTTGA
GAAGGATGGCTGGTCAGTCGCCACAGCTACTTACGGCGAAGAAGAATTTG
TCGGTGCTATTGCACGAGAGAATGTCTTCGCGACTCAGTTCCACCCGGAG
AAAAGTGGCCAGGCTGGATTACGGACTATTAGCGCCTTCCTAAATGGTGA
TCGCTTTCAAATGCTTACCCCGCAAGCGTCGCTCTCCTTGGACAAAAAAG
ATGGGCTGACACGTAGAATCATTGCCTGTCTTGATGTTCGCACCAATGAT
TCTGGTGATCTCGTCGTCACGAAAGGGGACCAGTATGATGTTCGTGAAAA
GGACGGGGTAGATACAGGAGGCCAAGTCAGAAACTTAGGGAAGCCCGTGG
ACATGGCCAAGAAGTACTACGAACAAGGGGCTGATGAGGTGACGTTCTTG
AACATCACTTCCTTCAGAAACTGTCCTGTTGCAGATGCTCCCATGCTGGA
AATCCTCAGGAGGACCTCAGAAACTGTCTTCGTACCGCTGACTATCGGGG
GCGGTATCAAGGACACTATTGACACAGATGGCACTCACGTCTCAGCCCTT
GATGTTGCGACAATGTATTTCAAGTCTGGTGCCGATAAAGTCAGCATCGG
TTCGGATGCTGTTATCGCAGCAGAGGAGTATTATGAAGGGGGCGAAAAGC
TGACTGGCAAGACGGCTATAGAATCTATATCAAAAGCATATGGTAACCAG
GCTGTGGTCGTGAGTGTGGATCCTAAACGTGTCTATGTGGACGGGCCAGA
AGATACCAACCATCATACAATCCGGACAAAGTACCCGAATGCTGCTGGCC
AGACGTTTTGCTGGTACCAATGCACTATCAAGGGTGGCAGAGAGTCTCGA
GACCTCGACGTCCGGCAACTAGCGAAGGCGGTTGAAGCAATGGGTGCTGG
TGAACTCTTGCTAAATTGCATCGACAAGGACGGAAGCAACAGCGGATTTG
ATCTGGAATTGATCAGTGATGTGAAAGCCGCCATTAAGATACCAGTGATT
GCCTCCAGCGGTGCTGGAAACCCCGAACATTTTGCAGAAGTCTTCCAAAA
TACTACGACTGATGCCGCCCTAGGCGCTGGCATGTTCCACCGAGGTGAAT
ATACTGTCAGCGATGTCAAACGTCACTTGGACAATGGAGGATTTCTCGTC
CGCAGGCCTGAAGTGGGCAATTAAATGCCTACGGTACATCTGCTAGATTA
CGTCGCCGGAAATGTCCGCTCCCTGGTCAATGCGATCAACAAAGTCGGCT
ATGAGGTGGAATGGATTAAGTCTCCAAGTGATCTGAAGAATGCAGAGAAG
CTCATCCTACCAGGTGTCGGTCATTTCGGCCATTGCTTATCTCAACTTTC
AGAGGGAGGCTACTTGGATCCGATCAGGCAACACATAGCTTCCGGGAAGC
CATTCATGGGAATTTGTGTTGGTCTACAATCACTTTTTGAAGGGTCTGAG
GAGGACTCAGATGTTCCGGGGCTGGGATTGATTCCGATGCGGATGCAGAA
ATTCAATCCCGACACTAAGAGTGTACCCCACATAGGCTGGAACTCTGCTA
TAGACACCAAAATTGGGTCTGCGGATAGTCAGAGCTTCTACGGATTAGTC
CCAAGCAGCAAATACTACTACGTCCACTCCTACGCAGCTCTCTACACCCC
AGGGCTCCTTGAGAAGGATGGCTGGTCAGTCGCCACAGCTACTTACGGCG
AAGAAGAATTTGTCGGTGCTATTGCACGAGAGAATGTCTTCGCGACTCAG
TTCCACCCGGAGAAAAGTGGCCAGGCTGGATTACGGACTATTAGCGCCTT
CCTAAATGGTGATCGCTTTCAAATGCTTACCCCGCAAGCGTCGCTCTCCT
TGGACAAAAAAGATGGGCTGACACGTAGAATCATTGCCTGTCTTGATGTT
CGCACCAATGATTCTGGTGATCTCGTCGTCACGAAAGGGGACCAGTATGA
TGTTCGTGAAAAGGACGGGGTAGATACAGGAGGCCAAGTCAGAAACTTAG
GGAAGCCCGTGGACATGGCCAAGAAGTACTACGAACAAGGGGCTGATGAG
GTGACGTTCTTGAACATCACTTCCTTCAGAAACTGTCCTGTTGCAGATGC
TCCCATGCTGGAAATCCTCAGGAGGACCTCAGAAACTGTCTTCGTACCGC
TGACTATCGGGGGCGGTATCAAGGACACTATTGACACAGATGGCACTCAC
GTCTCAGCCCTTGATGTTGCGACAATGTATTTCAAGTCTGGTGCCGATAA
AGTCAGCATCGGTTCGGATGCTGTTATCGCAGCAGAGGAGTATTATGAAG
GGGGCGAAAAGCTGACTGGCAAGACGGCTATAGAATCTATATCAAAAGCA
TATGGTAACCAGGCTGTGGTCGTGAGTGTGGATCCTAAACGTGTCTATGT
GGACGGGCCAGAAGATACCAACCATCATACAATCCGGACAAAGTACCCGA
ATGCTGCTGGCCAGACGTTTTGCTGGTACCAATGCACTATCAAGGGTGGC
AGAGAGTCTCGAGACCTCGACGTCCGGCAACTAGCGAAGGCGGTTGAAGC
AATGGGTGCTGGTGAACTCTTGCTAAATTGCATCGACAAGGACGGAAGCA
ACAGCGGATTTGATCTGGAATTGATCAGTGATGTGAAAGCCGCCATTAAG
ATACCAGTGATTGCCTCCAGCGGTGCTGGAAACCCCGAACATTTTGCAGA
AGTCTTCCAAAATACTACGACTGATGCCGCCCTAGGCGCTGGCATGTTCC
ACCGAGGTGAATATACTGTCAGCGATGTCAAACGTCACTTGGACAATGGA
GGATTTCTCGTCCGCAGGCCTGAAGTGGGCAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000105histidine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016833oxo-acid-lyase activity
GO:0016763transferase activity, transferring pentosyl groups
GO:0000107imidazoleglycerol-phosphate synthase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002399CBS51388_002399Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002399-T1.exon1CBS51388_002399-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002399-T1.exon2CBS51388_002399-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002399-T1.exon3CBS51388_002399-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002399-T1.cdsCBS51388_002399-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002399-T1CBS51388_002399-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261NLY
NoteMEROPS:MER0065588
DBxrefInterPro:IPR011060
DBxrefInterPro:IPR014640
DBxrefInterPro:IPR010139
DBxrefInterPro:IPR004651
DBxrefInterPro:IPR017926
DBxrefInterPro:IPR006062
DBxrefInterPro:IPR029062
DBxrefInterPro:IPR013785
DBxrefPFAM:PF01174
DBxrefPFAM:PF00977
DBxrefPFAM:PF00117
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:3603807..3605593 +
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