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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:85185..86838+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002440-T1 ID=CBS51388_002440-T1|Name=CBS51388_002440-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1654bp|location=Sequence derived from alignment at An03:85185..86838+ (Aspergillus niger CBS 513.88)
ATGGATGAATGGAACGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCT
GCTGCGAGGAGGCCACACAAATAGTGTGGATATCGTCAAGGCCTACCTCG
CTCAAATCGACCGGCACAACAAAGCTGGCCTGAAGCTACATGCAATCATC
TCCGTCAATGCTGAGACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGA
AAGATCAGAGGGCAAAGTCCGCAGCCCACTTCATGGAATCCCGATCATCG
TAAAAGATGCGATCATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTC
GGCGCTTTCGCTTTCAAAGATACCTATGGACTGAAGAACGCATCTATCAT
AGATATCCTCCTGGAGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGA
CGGAATTTTGCGGTCTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCA
ATCAACGGACAAACTCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGA
CGATCTCTTCATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCG
CAGTTGGGGTTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACT
TCGGGCTCAGTCTGCATGCCGGCAAATCGGGCAGGGCTGTACTCCATCAC
TGCGAGTCGAGGGAGTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAG
ACTTTGATAAGTTGGGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTG
TTGATGCCGCTGCTCAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGA
CATTTCGGTCGGTTTTGTCGATCCGATTGTATGGGATGCATTTGGATTCC
AAAAGAGCCAAGACAAAAATATAGAAAGTCAGATTGTAAGTTATCTTATC
ATTGATTTCCAGGCGGGCTACACCTGACGCTTTATAGCTCGAGCGATACG
AATGGGCAAAGGCAGAAATTACTCGTCGGGGAGGCCGAGTTGTTTACCCC
GTAGGTTTACCGACGATGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAA
CTACTCCGTTGCATGTGCGCTCATCACTTCTTACGACATGTGATCGATAA
TAGCTGATGAAAGTATAGTTCATGAATTTCCAAGCCTATTGGAGGATTAC
TGCTCTCTCCTGGTAGATCCCGAAGTCACATCAGTCCCAGAATTGATCCA
ATTCAATGAACAGCATGCCTCTTCTGCCATGCCCCAGCGTAAGTAATTAT
CATGGCATCTAAAGAAGTCCAAATACTTATACCTCGTAGCACATACCGAT
CAAACTGATCTTAAGGAGACGCTCAAGTCAACCATGACTGAGGAGACAGC
TACAGCAGCCAAGGCCTACGCTCAGCGCTTAGCTGGTCCCGACGGCATCG
ATGCCGCGCTACAAAGTAGTCGCATTAACCTGGTAATTGGACCGGGAGAT
TGTGCAATCTGCGCAGTGGCTGCTTTAGCAGGCTATCCAACCGCCATGGT
CCCACTCGATCGCTTGGAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGGT
TAATGCTGATTGCCAGCGCGGGGGGAGAAGCACAAATCCTGGCATTTATG
CAGCTGTGGAAACAGATTGTGGGTGATTGGAAGATTCCCCCTCTGCTGTT
CTGA back to topCoding sequence (CDS) from alignment at An03:85185..86838+ >CBS51388_002440-T1 ID=CBS51388_002440-T1|Name=CBS51388_002440-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5988bp|location=Sequence derived from alignment at An03:85185..86838+ (Aspergillus niger CBS 513.88)
ATGGATGAATGGAACGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCT
GCTGCGAGGAGGCCACACAAATAGTGTGGATATCGTCAAGGCCTACCTCG
CTCAAATCGACCGGCACAACAAAGCTGGCCTGAAGCTACATGCAATCATC
TCCGTCAATGCTGAGACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGA
AAGATCAGAGGGCAAAGTCCGCAGCCCACTTCATGGAATCCCGATCATCG
TAAAAGATGCGATCATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTC
GGCGCTTTCGCTTTCAAAGATACCTATGGACTGAAGAACGCATCTATCAT
AGATATCCTCCTGGAGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGA
CGGAATTTTGCGGTCTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCA
ATCAACGGACAAACTCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGA
CGATCTCTTCATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCG
CAGTTGGGGTTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACT
TCGGGCTCAGTCTGCATGCCGGCAAATCGGGCAGGGCTGTACTCCATCAC
TGCGAGTCGAGGGAGTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAG
ACTTTGATAAGTTGGGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTG
TTGATGCCGCTGCTCAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGA
CATTTCGGTCGGTTTTGTCGATCCGATTGTATGGGATGCATTTGGATTCC
AAAAGAGCCAAGACAAAAATATAGAAAGTCAGATTCTCGAGCGATACGAA
TGGGCAAAGGCAGAAATTACTCGTCGGGGAGGCCGAGTTGTTTACCCCGT
AGGTTTACCGACGATGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAACT
ACTCCGTTGCATTTCATGAATTTCCAAGCCTATTGGAGGATTACTGCTCT
CTCCTGGTAGATCCCGAAGTCACATCAGTCCCAGAATTGATCCAATTCAA
TGAACAGCATGCCTCTTCTGCCATGCCCCAGCCACATACCGATCAAACTG
ATCTTAAGGAGACGCTCAAGTCAACCATGACTGAGGAGACAGCTACAGCA
GCCAAGGCCTACGCTCAGCGCTTAGCTGGTCCCGACGGCATCGATGCCGC
GCTACAAAGTAGTCGCATTAACCTGGTAATTGGACCGGGAGATTGTGCAA
TCTGCGCAGTGGCTGCTTTAGCAGGCTATCCAACCGCCATGGTCCCACTC
GATCGCTTGGAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCT
GATTGCCAGCGCGGGGGGAGAAGCACAAATCCTGGCATTTATGCAGCTGT
GGAAACAGATTGTGGGTGATTGGAAGATTCCCCCTCTGCTGTTCTGAATG
GATGAATGGAACGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCTGCT
GCGAGGAGGCCACACAAATAGTGTGGATATCGTCAAGGCCTACCTCGCTC
AAATCGACCGGCACAACAAAGCTGGCCTGAAGCTACATGCAATCATCTCC
GTCAATGCTGAGACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGAAAG
ATCAGAGGGCAAAGTCCGCAGCCCACTTCATGGAATCCCGATCATCGTAA
AAGATGCGATCATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTCGGC
GCTTTCGCTTTCAAAGATACCTATGGACTGAAGAACGCATCTATCATAGA
TATCCTCCTGGAGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGACGG
AATTTTGCGGTCTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCAATC
AACGGACAAACTCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGACGA
TCTCTTCATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCGCAG
TTGGGGTTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACTTCG
GGCTCAGTCTGCATGCCGGCAAATCGGGCAGGGCTGTACTCCATCACTGC
GAGTCGAGGGAGTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAGACT
TTGATAAGTTGGGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTGTTG
ATGCCGCTGCTCAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGACAT
TTCGGTCGGTTTTGTCGATCCGATTGTATGGGATGCATTTGGATTCCAAA
AGAGCCAAGACAAAAATATAGAAAGTCAGATTCTCGAGCGATACGAATGG
GCAAAGGCAGAAATTACTCGTCGGGGAGGCCGAGTTGTTTACCCCGTAGG
TTTACCGACGATGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAACTACT
CCGTTGCATTTCATGAATTTCCAAGCCTATTGGAGGATTACTGCTCTCTC
CTGGTAGATCCCGAAGTCACATCAGTCCCAGAATTGATCCAATTCAATGA
ACAGCATGCCTCTTCTGCCATGCCCCAGCCACATACCGATCAAACTGATC
TTAAGGAGACGCTCAAGTCAACCATGACTGAGGAGACAGCTACAGCAGCC
AAGGCCTACGCTCAGCGCTTAGCTGGTCCCGACGGCATCGATGCCGCGCT
ACAAAGTAGTCGCATTAACCTGGTAATTGGACCGGGAGATTGTGCAATCT
GCGCAGTGGCTGCTTTAGCAGGCTATCCAACCGCCATGGTCCCACTCGAT
CGCTTGGAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCTGAT
TGCCAGCGCGGGGGGAGAAGCACAAATCCTGGCATTTATGCAGCTGTGGA
AACAGATTGTGGGTGATTGGAAGATTCCCCCTCTGCTGTTCTGAATGGAT
GAATGGAACGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCTGCTGCG
AGGAGGCCACACAAATAGTGTGGATATCGTCAAGGCCTACCTCGCTCAAA
TCGACCGGCACAACAAAGCTGGCCTGAAGCTACATGCAATCATCTCCGTC
AATGCTGAGACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGAAAGATC
AGAGGGCAAAGTCCGCAGCCCACTTCATGGAATCCCGATCATCGTAAAAG
ATGCGATCATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTCGGCGCT
TTCGCTTTCAAAGATACCTATGGACTGAAGAACGCATCTATCATAGATAT
CCTCCTGGAGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGACGGAAT
TTTGCGGTCTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCAATCAAC
GGACAAACTCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGACGATCT
CTTCATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCGCAGTTG
GGGTTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACTTCGGGC
TCAGTCTGCATGCCGGCAAATCGGGCAGGGCTGTACTCCATCACTGCGAG
TCGAGGGAGTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAGACTTTG
ATAAGTTGGGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTGTTGATG
CCGCTGCTCAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGACATTTC
GGTCGGTTTTGTCGATCCGATTGTATGGGATGCATTTGGATTCCAAAAGA
GCCAAGACAAAAATATAGAAAGTCAGATTCTCGAGCGATACGAATGGGCA
AAGGCAGAAATTACTCGTCGGGGAGGCCGAGTTGTTTACCCCGTAGGTTT
ACCGACGATGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAACTACTCCG
TTGCATTTCATGAATTTCCAAGCCTATTGGAGGATTACTGCTCTCTCCTG
GTAGATCCCGAAGTCACATCAGTCCCAGAATTGATCCAATTCAATGAACA
GCATGCCTCTTCTGCCATGCCCCAGCCACATACCGATCAAACTGATCTTA
AGGAGACGCTCAAGTCAACCATGACTGAGGAGACAGCTACAGCAGCCAAG
GCCTACGCTCAGCGCTTAGCTGGTCCCGACGGCATCGATGCCGCGCTACA
AAGTAGTCGCATTAACCTGGTAATTGGACCGGGAGATTGTGCAATCTGCG
CAGTGGCTGCTTTAGCAGGCTATCCAACCGCCATGGTCCCACTCGATCGC
TTGGAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCTGATTGC
CAGCGCGGGGGGAGAAGCACAAATCCTGGCATTTATGCAGCTGTGGAAAC
AGATTGTGGGTGATTGGAAGATTCCCCCTCTGCTGTTCTGAATGGATGAA
TGGAACGTCCTAAGCGCAACGGCAACTCAACTTGGCCAGCTGCTGCGAGG
AGGCCACACAAATAGTGTGGATATCGTCAAGGCCTACCTCGCTCAAATCG
ACCGGCACAACAAAGCTGGCCTGAAGCTACATGCAATCATCTCCGTCAAT
GCTGAGACTGCTCTTGCTCAAGCAGCGACCCGCGACAACGAAAGATCAGA
GGGCAAAGTCCGCAGCCCACTTCATGGAATCCCGATCATCGTAAAAGATG
CGATCATCACGTCCGAGTCCCTAGGTTTACCAACCACGGTCGGCGCTTTC
GCTTTCAAAGATACCTATGGACTGAAGAACGCATCTATCATAGATATCCT
CCTGGAGCATGGCATGATCATCCTTGCAAAAGCCAGTTTGACGGAATTTT
GCGGTCTGAAGGCGACTTGTATAACCGCCGGCTGGTCGGCAATCAACGGA
CAAACTCAGTCCGCTTATATCGAGGGTGGTTTCCGATCGGACGATCTCTT
CATCGGTCGCTCTGGGCCAGGAGGCTCCTCGTCGGGGTCCGCAGTTGGGG
TTTCAGCCGGCTTTGCGCCGTTATCGCTGGGGACGGAAACTTCGGGCTCA
GTCTGCATGCCGGCAAATCGGGCAGGGCTGTACTCCATCACTGCGAGTCG
AGGGAGTGTCCCCATAGAAGGAATCTTTCGCTTGAGCAAAGACTTTGATA
AGTTGGGTGCTATGGCCAAATGTCCCGAGGACCTCGGCCTGTTGATGCCG
CTGCTCAATGGTTCGCATTTGGAGCCTGTGACGTGGAGCGACATTTCGGT
CGGTTTTGTCGATCCGATTGTATGGGATGCATTTGGATTCCAAAAGAGCC
AAGACAAAAATATAGAAAGTCAGATTCTCGAGCGATACGAATGGGCAAAG
GCAGAAATTACTCGTCGGGGAGGCCGAGTTGTTTACCCCGTAGGTTTACC
GACGATGGAGAGCCTTTCCTTTGAAGGCAAGAGTGTCAACTACTCCGTTG
CATTTCATGAATTTCCAAGCCTATTGGAGGATTACTGCTCTCTCCTGGTA
GATCCCGAAGTCACATCAGTCCCAGAATTGATCCAATTCAATGAACAGCA
TGCCTCTTCTGCCATGCCCCAGCCACATACCGATCAAACTGATCTTAAGG
AGACGCTCAAGTCAACCATGACTGAGGAGACAGCTACAGCAGCCAAGGCC
TACGCTCAGCGCTTAGCTGGTCCCGACGGCATCGATGCCGCGCTACAAAG
TAGTCGCATTAACCTGGTAATTGGACCGGGAGATTGTGCAATCTGCGCAG
TGGCTGCTTTAGCAGGCTATCCAACCGCCATGGTCCCACTCGATCGCTTG
GAAGGTCCTGGTGGGCTGGGCCAGCCCCAGGGGTTAATGCTGATTGCCAG
CGCGGGGGGAGAAGCACAAATCCTGGCATTTATGCAGCTGTGGAAACAGA
TTGTGGGTGATTGGAAGATTCCCCCTCTGCTGTTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023631 |
| DBxref | InterPro:IPR036928 |
| DBxref | PFAM:PF01425 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:85185..86838 + |
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