You are here

Home

CBS51388_002476-T1, CBS51388_002476-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002476-T1
Unique NameCBS51388_002476-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:173536..175119+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002476-T1 ID=CBS51388_002476-T1|Name=CBS51388_002476-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1584bp|location=Sequence derived from alignment at An03:173536..175119+ (Aspergillus niger CBS 513.88)
ATGGAATGTGGCGAAGAGTTCATCGATCCATCTCTGCTGTGCCACTCGAC
GCTCGACGGGCATGATTTGGACTCCAGGCATTTTAATCTTTCCAATCCGC
AGCCTTATGATCTGAATCTCCAGCAAGTACCAGCGGTCCTGCCCAACGCC
CAGCAACGGGCTGTGCCAAGCGAGCTATTTGAGGATGCGACCACCAACAA
CACTACTGCCCCGCGGGGCCAACTTCCACGGCGTAGAAGTCGGTACTTAA
CGAGGCATTCGGGGACACAAGCATACTCTGTGATGATACCAAAAGCAAGC
AGCTTCAGTCCTATGGAGCGCTGGCGGAATTCGCCCCCTGAGGAAGAAGG
TTGCCTAATCCCCGATATCATCGATGCTCTCAGAGACAACCCAAGCCAAG
GGGTCCAAACCAACTTGCAAAACCCCGGCGACGACTACAGTGCGTTCCAT
GGGTATCGGAGAGCTGCTTCAATTACTAGCGGGGAGTCTAGTGCATCCTC
GCGAAGCACCCAGAAATCCGGGCGTTCAAGCTCATCGGCCCAGAATCCAT
TGGCGGTACAGGGGCGTCACGGCAACATCAGGGCGGGCAAGACTACGAGA
CGAAAGACGAAGATTACTTCGACCACTGCTCAGCGTCGATACTGCTGCAC
ATTCTGCTGCGACCGGTTCAAAAGCAAGTATGACTGGGCACGACATGAGA
AATCGCTCCACGTCACCTTGGAAGCATGGCACTGCGCGCCTTATGGCACT
ACCATTATGTCCTCTAATGAACCTTCTATGACTAGATGTGCCTTCTGTGG
GCTTACTAACCCCGACTCCGACCATCTGGAGGAACACGCCGCCACAGCTT
GCGAGGACGAGTCCAGCAGTCGACGTTCCTTCCGCCGTAAAGATCACTTA
GTGCAGCATCTACGGCTCGTACACAATGTCGACTCCCCGCCACAACTCGA
CAGTTGGAGGATCGGACAGTCCGCCATCACCTCGCGGTGCGGCTTCTGCA
GTCAAGCGCTGATGACCTGGAAAGAGCGTGTGGACCATCTAGCCGAACAC
TTTCGGACAGGCTCGACAATGGCAGAGTGGCGCGGCGACCATGACTTCCC
GCCTGATTTCGCCGCCCTAGTAGCCAATGCATTGCCCCCTTACCTCATCG
GCTCAGAATCTCAGAGCATGATTCCATTTTCAGCGACAAATTGCGATGTG
GAAGATCATTTGGCGCAGATTTACTCCCGAGCTAATTGGGACGCGAAAGA
CCAGAAAGAGGCCAGCACTATTACAGCCCCTTCGGCTCCAAGTGTAGCCT
TGCCCTTGCGGGCTCTTGCACCGGGTGTTGCCCCCGAGCGGCTCAGCTCG
TTCACCCAAGTGCTAACGCTGCATCTCAGCCGGTTTGCACAGGAACAGAT
GAAAAAGGGCGTGATTCCGAGTGACGAGATGTTCCAGCAGGAATCCAGAC
GAGTACTGTATGACTCAGATGATTCATGGAACCAGACGATTGCAGATAAT
CCGGAGTGGCTGGCTACTTTTAAGGATCTGCATTTCGATAAAGAGAAGGG
TGTTCATGATTCTGGCGAAAACTTTGCCTCATGA
back to top

Coding sequence (CDS) from alignment at An03:173536..175119+

>CBS51388_002476-T1 ID=CBS51388_002476-T1|Name=CBS51388_002476-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1584bp|location=Sequence derived from alignment at An03:173536..175119+ (Aspergillus niger CBS 513.88)
ATGGAATGTGGCGAAGAGTTCATCGATCCATCTCTGCTGTGCCACTCGAC
GCTCGACGGGCATGATTTGGACTCCAGGCATTTTAATCTTTCCAATCCGC
AGCCTTATGATCTGAATCTCCAGCAAGTACCAGCGGTCCTGCCCAACGCC
CAGCAACGGGCTGTGCCAAGCGAGCTATTTGAGGATGCGACCACCAACAA
CACTACTGCCCCGCGGGGCCAACTTCCACGGCGTAGAAGTCGGTACTTAA
CGAGGCATTCGGGGACACAAGCATACTCTGTGATGATACCAAAAGCAAGC
AGCTTCAGTCCTATGGAGCGCTGGCGGAATTCGCCCCCTGAGGAAGAAGG
TTGCCTAATCCCCGATATCATCGATGCTCTCAGAGACAACCCAAGCCAAG
GGGTCCAAACCAACTTGCAAAACCCCGGCGACGACTACAGTGCGTTCCAT
GGGTATCGGAGAGCTGCTTCAATTACTAGCGGGGAGTCTAGTGCATCCTC
GCGAAGCACCCAGAAATCCGGGCGTTCAAGCTCATCGGCCCAGAATCCAT
TGGCGGTACAGGGGCGTCACGGCAACATCAGGGCGGGCAAGACTACGAGA
CGAAAGACGAAGATTACTTCGACCACTGCTCAGCGTCGATACTGCTGCAC
ATTCTGCTGCGACCGGTTCAAAAGCAAGTATGACTGGGCACGACATGAGA
AATCGCTCCACGTCACCTTGGAAGCATGGCACTGCGCGCCTTATGGCACT
ACCATTATGTCCTCTAATGAACCTTCTATGACTAGATGTGCCTTCTGTGG
GCTTACTAACCCCGACTCCGACCATCTGGAGGAACACGCCGCCACAGCTT
GCGAGGACGAGTCCAGCAGTCGACGTTCCTTCCGCCGTAAAGATCACTTA
GTGCAGCATCTACGGCTCGTACACAATGTCGACTCCCCGCCACAACTCGA
CAGTTGGAGGATCGGACAGTCCGCCATCACCTCGCGGTGCGGCTTCTGCA
GTCAAGCGCTGATGACCTGGAAAGAGCGTGTGGACCATCTAGCCGAACAC
TTTCGGACAGGCTCGACAATGGCAGAGTGGCGCGGCGACCATGACTTCCC
GCCTGATTTCGCCGCCCTAGTAGCCAATGCATTGCCCCCTTACCTCATCG
GCTCAGAATCTCAGAGCATGATTCCATTTTCAGCGACAAATTGCGATGTG
GAAGATCATTTGGCGCAGATTTACTCCCGAGCTAATTGGGACGCGAAAGA
CCAGAAAGAGGCCAGCACTATTACAGCCCCTTCGGCTCCAAGTGTAGCCT
TGCCCTTGCGGGCTCTTGCACCGGGTGTTGCCCCCGAGCGGCTCAGCTCG
TTCACCCAAGTGCTAACGCTGCATCTCAGCCGGTTTGCACAGGAACAGAT
GAAAAAGGGCGTGATTCCGAGTGACGAGATGTTCCAGCAGGAATCCAGAC
GAGTACTGTATGACTCAGATGATTCATGGAACCAGACGATTGCAGATAAT
CCGGAGTGGCTGGCTACTTTTAAGGATCTGCATTTCGATAAAGAGAAGGG
TGTTCATGATTCTGGCGAAAACTTTGCCTCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002476CBS51388_002476Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002476-T1.exon1CBS51388_002476-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002476-T1.cdsCBS51388_002476-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002476-T1CBS51388_002476-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_3.3
DBxrefInterPro:IPR013087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:173536..175119 +
Powered by Drupal