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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:211024..212439- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002491-T1 ID=CBS51388_002491-T1|Name=CBS51388_002491-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1416bp|location=Sequence derived from alignment at An03:211024..212439- (Aspergillus niger CBS 513.88)
ATGGCACCTACTCGGTTGCGGCGTCTGGCCATCGTCGCCCTTATCGGCGC
GGTGTTAATGATTTGCATCTGCCAGCAACGTACCCAGTTCGACACTAGGC
CGTTAGATCTTGAGGATCAGTACCCACTACTGTACCGTCATGTCCACACA
CAGAGTACCGAGGGAGGAGGTAGGCGATCATTCACAATGCTCTAGTATTA
ACTGACTGAACTAATTGTTCTATCTTGCAGCCTGGTATATCCCGCCACAA
TGGACCAACGCATCGAAACCACCCCCGAAGAATATCGTCGAAGCGGCCGA
GCTAGCTCTTAGCGCCGCCCAAGCTTCCCCGGACGGGTACCTGCCTCATT
CAACAATTCCCATGATCGTACACCAAACCTGGAAAAACACACGAATCGAC
ACCTGGCCCCAAATCATCCGTCATAGCGCCGAGCGATGGCTTCAGACTAC
CAAAGGCCAGATGGCCTACTTTCTGTGGACGGACGAAGGCATGGAACAAT
TTATTCACCATTTTGAACCGGACTTGGAGAGCCAGTATGCGCATCTGGCG
CGCAATGTTGAGCGATCGGATGTATTCCGCATCGTGATTTCCAAATGGAT
TGGAGGAGTGGTAGGTGCACAAGAACAACTTCAGATTCGAACAGACTTTT
TAATTTGAACAGTATGGCGATATCGACACTGAACCGCTTCGCACACCTGC
CGACTGGATCACCCCGACCGATCTCCACGCCTGGAACGATACACGAGCCG
GTACATCCTATAACTCTACCGCTCCGGTACGCGCGATTGTCGGCCTCGAG
GCTGATTGCCCTGAGGGGTCCGATACGTACTGGCGCATGGGTTACTCGCA
ACCCGTGCAGCTCACGCAATGGGCGTTCGCCTGGGCCCCGGGCCATCCCA
TCCTGCAGAAGTTCATCGATCGGTTGTCAGCAACGATAGGAGATATTTCC
GACCGCTACGGGGGGTCACTCCAGTCGAGAGCTGCTCGACAGGAGCTTAT
GAATCTGGATCCGCTCACGCTGACCGGTCCGGCTGCTTTCACCGACGTCG
TGCGGAGTCGACTGGAAGAAGTGGCCGGCTTACGCTGGCATGCACTGTCC
GGTCTGAAGGACGGAGGGAAGAGCAAGTTGGTAGACGATGTGCTTATTCT
TCCAATTACTGGATTCAGGTATGTTGGCAGCCTCACCTAGTTAATGAAAA
GTGTAAACAAAGCACTGACACAACGATAGTCCCGGACGTGGCACATATGG
CAATATGGGATCTAAGCCAATCACTGACCCTTCCGCACGCCTCAGGCATC
TGGCACAGGGATCGTGGAGAGCTTTCGACGTGAAAGTTGAGTATGGCAAA
TTCTGCCGGACTGTCCTGGGAATGTGTCGCGATTGGTCAAAAGTGCCTAC
TGTTGTTGTTCAATGA back to topCoding sequence (CDS) from alignment at An03:211024..212439- >CBS51388_002491-T1 ID=CBS51388_002491-T1|Name=CBS51388_002491-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4968bp|location=Sequence derived from alignment at An03:211024..212439- (Aspergillus niger CBS 513.88)
TCCCGGACGTGGCACATATGGCAATATGGGATCTAAGCCAATCACTGACC
CTTCCGCACGCCTCAGGCATCTGGCACAGGGATCGTGGAGAGCTTTCGAC
GTGAAAGTTGAGTATGGCAAATTCTGCCGGACTGTCCTGGGAATGTGTCG
CGATTGGTCAAAAGTGCCTACTGTTGTTGTTCAATGATATGGCGATATCG
ACACTGAACCGCTTCGCACACCTGCCGACTGGATCACCCCGACCGATCTC
CACGCCTGGAACGATACACGAGCCGGTACATCCTATAACTCTACCGCTCC
GGTACGCGCGATTGTCGGCCTCGAGGCTGATTGCCCTGAGGGGTCCGATA
CGTACTGGCGCATGGGTTACTCGCAACCCGTGCAGCTCACGCAATGGGCG
TTCGCCTGGGCCCCGGGCCATCCCATCCTGCAGAAGTTCATCGATCGGTT
GTCAGCAACGATAGGAGATATTTCCGACCGCTACGGGGGGTCACTCCAGT
CGAGAGCTGCTCGACAGGAGCTTATGAATCTGGATCCGCTCACGCTGACC
GGTCCGGCTGCTTTCACCGACGTCGTGCGGAGTCGACTGGAAGAAGTGGC
CGGCTTACGCTGGCATGCACTGTCCGGTCTGAAGGACGGAGGGAAGAGCA
AGTTGGTAGACGATGTGCTTATTCTTCCAATTACTGGATTCAGCCTGGTA
TATCCCGCCACAATGGACCAACGCATCGAAACCACCCCCGAAGAATATCG
TCGAAGCGGCCGAGCTAGCTCTTAGCGCCGCCCAAGCTTCCCCGGACGGG
TACCTGCCTCATTCAACAATTCCCATGATCGTACACCAAACCTGGAAAAA
CACACGAATCGACACCTGGCCCCAAATCATCCGTCATAGCGCCGAGCGAT
GGCTTCAGACTACCAAAGGCCAGATGGCCTACTTTCTGTGGACGGACGAA
GGCATGGAACAATTTATTCACCATTTTGAACCGGACTTGGAGAGCCAGTA
TGCGCATCTGGCGCGCAATGTTGAGCGATCGGATGTATTCCGCATCGTGA
TTTCCAAATGGATTGGAGGAGTGATGGCACCTACTCGGTTGCGGCGTCTG
GCCATCGTCGCCCTTATCGGCGCGGTGTTAATGATTTGCATCTGCCAGCA
ACGTACCCAGTTCGACACTAGGCCGTTAGATCTTGAGGATCAGTACCCAC
TACTGTACCGTCATGTCCACACACAGAGTACCGAGGGAGGAGTCCCGGAC
GTGGCACATATGGCAATATGGGATCTAAGCCAATCACTGACCCTTCCGCA
CGCCTCAGGCATCTGGCACAGGGATCGTGGAGAGCTTTCGACGTGAAAGT
TGAGTATGGCAAATTCTGCCGGACTGTCCTGGGAATGTGTCGCGATTGGT
CAAAAGTGCCTACTGTTGTTGTTCAATGATATGGCGATATCGACACTGAA
CCGCTTCGCACACCTGCCGACTGGATCACCCCGACCGATCTCCACGCCTG
GAACGATACACGAGCCGGTACATCCTATAACTCTACCGCTCCGGTACGCG
CGATTGTCGGCCTCGAGGCTGATTGCCCTGAGGGGTCCGATACGTACTGG
CGCATGGGTTACTCGCAACCCGTGCAGCTCACGCAATGGGCGTTCGCCTG
GGCCCCGGGCCATCCCATCCTGCAGAAGTTCATCGATCGGTTGTCAGCAA
CGATAGGAGATATTTCCGACCGCTACGGGGGGTCACTCCAGTCGAGAGCT
GCTCGACAGGAGCTTATGAATCTGGATCCGCTCACGCTGACCGGTCCGGC
TGCTTTCACCGACGTCGTGCGGAGTCGACTGGAAGAAGTGGCCGGCTTAC
GCTGGCATGCACTGTCCGGTCTGAAGGACGGAGGGAAGAGCAAGTTGGTA
GACGATGTGCTTATTCTTCCAATTACTGGATTCAGCCTGGTATATCCCGC
CACAATGGACCAACGCATCGAAACCACCCCCGAAGAATATCGTCGAAGCG
GCCGAGCTAGCTCTTAGCGCCGCCCAAGCTTCCCCGGACGGGTACCTGCC
TCATTCAACAATTCCCATGATCGTACACCAAACCTGGAAAAACACACGAA
TCGACACCTGGCCCCAAATCATCCGTCATAGCGCCGAGCGATGGCTTCAG
ACTACCAAAGGCCAGATGGCCTACTTTCTGTGGACGGACGAAGGCATGGA
ACAATTTATTCACCATTTTGAACCGGACTTGGAGAGCCAGTATGCGCATC
TGGCGCGCAATGTTGAGCGATCGGATGTATTCCGCATCGTGATTTCCAAA
TGGATTGGAGGAGTGATGGCACCTACTCGGTTGCGGCGTCTGGCCATCGT
CGCCCTTATCGGCGCGGTGTTAATGATTTGCATCTGCCAGCAACGTACCC
AGTTCGACACTAGGCCGTTAGATCTTGAGGATCAGTACCCACTACTGTAC
CGTCATGTCCACACACAGAGTACCGAGGGAGGAGTCCCGGACGTGGCACA
TATGGCAATATGGGATCTAAGCCAATCACTGACCCTTCCGCACGCCTCAG
GCATCTGGCACAGGGATCGTGGAGAGCTTTCGACGTGAAAGTTGAGTATG
GCAAATTCTGCCGGACTGTCCTGGGAATGTGTCGCGATTGGTCAAAAGTG
CCTACTGTTGTTGTTCAATGATATGGCGATATCGACACTGAACCGCTTCG
CACACCTGCCGACTGGATCACCCCGACCGATCTCCACGCCTGGAACGATA
CACGAGCCGGTACATCCTATAACTCTACCGCTCCGGTACGCGCGATTGTC
GGCCTCGAGGCTGATTGCCCTGAGGGGTCCGATACGTACTGGCGCATGGG
TTACTCGCAACCCGTGCAGCTCACGCAATGGGCGTTCGCCTGGGCCCCGG
GCCATCCCATCCTGCAGAAGTTCATCGATCGGTTGTCAGCAACGATAGGA
GATATTTCCGACCGCTACGGGGGGTCACTCCAGTCGAGAGCTGCTCGACA
GGAGCTTATGAATCTGGATCCGCTCACGCTGACCGGTCCGGCTGCTTTCA
CCGACGTCGTGCGGAGTCGACTGGAAGAAGTGGCCGGCTTACGCTGGCAT
GCACTGTCCGGTCTGAAGGACGGAGGGAAGAGCAAGTTGGTAGACGATGT
GCTTATTCTTCCAATTACTGGATTCAGCCTGGTATATCCCGCCACAATGG
ACCAACGCATCGAAACCACCCCCGAAGAATATCGTCGAAGCGGCCGAGCT
AGCTCTTAGCGCCGCCCAAGCTTCCCCGGACGGGTACCTGCCTCATTCAA
CAATTCCCATGATCGTACACCAAACCTGGAAAAACACACGAATCGACACC
TGGCCCCAAATCATCCGTCATAGCGCCGAGCGATGGCTTCAGACTACCAA
AGGCCAGATGGCCTACTTTCTGTGGACGGACGAAGGCATGGAACAATTTA
TTCACCATTTTGAACCGGACTTGGAGAGCCAGTATGCGCATCTGGCGCGC
AATGTTGAGCGATCGGATGTATTCCGCATCGTGATTTCCAAATGGATTGG
AGGAGTGATGGCACCTACTCGGTTGCGGCGTCTGGCCATCGTCGCCCTTA
TCGGCGCGGTGTTAATGATTTGCATCTGCCAGCAACGTACCCAGTTCGAC
ACTAGGCCGTTAGATCTTGAGGATCAGTACCCACTACTGTACCGTCATGT
CCACACACAGAGTACCGAGGGAGGAGTCCCGGACGTGGCACATATGGCAA
TATGGGATCTAAGCCAATCACTGACCCTTCCGCACGCCTCAGGCATCTGG
CACAGGGATCGTGGAGAGCTTTCGACGTGAAAGTTGAGTATGGCAAATTC
TGCCGGACTGTCCTGGGAATGTGTCGCGATTGGTCAAAAGTGCCTACTGT
TGTTGTTCAATGATATGGCGATATCGACACTGAACCGCTTCGCACACCTG
CCGACTGGATCACCCCGACCGATCTCCACGCCTGGAACGATACACGAGCC
GGTACATCCTATAACTCTACCGCTCCGGTACGCGCGATTGTCGGCCTCGA
GGCTGATTGCCCTGAGGGGTCCGATACGTACTGGCGCATGGGTTACTCGC
AACCCGTGCAGCTCACGCAATGGGCGTTCGCCTGGGCCCCGGGCCATCCC
ATCCTGCAGAAGTTCATCGATCGGTTGTCAGCAACGATAGGAGATATTTC
CGACCGCTACGGGGGGTCACTCCAGTCGAGAGCTGCTCGACAGGAGCTTA
TGAATCTGGATCCGCTCACGCTGACCGGTCCGGCTGCTTTCACCGACGTC
GTGCGGAGTCGACTGGAAGAAGTGGCCGGCTTACGCTGGCATGCACTGTC
CGGTCTGAAGGACGGAGGGAAGAGCAAGTTGGTAGACGATGTGCTTATTC
TTCCAATTACTGGATTCAGCCTGGTATATCCCGCCACAATGGACCAACGC
ATCGAAACCACCCCCGAAGAATATCGTCGAAGCGGCCGAGCTAGCTCTTA
GCGCCGCCCAAGCTTCCCCGGACGGGTACCTGCCTCATTCAACAATTCCC
ATGATCGTACACCAAACCTGGAAAAACACACGAATCGACACCTGGCCCCA
AATCATCCGTCATAGCGCCGAGCGATGGCTTCAGACTACCAAAGGCCAGA
TGGCCTACTTTCTGTGGACGGACGAAGGCATGGAACAATTTATTCACCAT
TTTGAACCGGACTTGGAGAGCCAGTATGCGCATCTGGCGCGCAATGTTGA
GCGATCGGATGTATTCCGCATCGTGATTTCCAAATGGATTGGAGGAGTGA
TGGCACCTACTCGGTTGCGGCGTCTGGCCATCGTCGCCCTTATCGGCGCG
GTGTTAATGATTTGCATCTGCCAGCAACGTACCCAGTTCGACACTAGGCC
GTTAGATCTTGAGGATCAGTACCCACTACTGTACCGTCATGTCCACACAC
AGAGTACCGAGGGAGGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029044 |
| DBxref | InterPro:IPR007577 |
| DBxref | PFAM:PF04488 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:211024..212439 - |
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