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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:233903..235841- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002502-T1 ID=CBS51388_002502-T1|Name=CBS51388_002502-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1939bp|location=Sequence derived from alignment at An03:233903..235841- (Aspergillus niger CBS 513.88)
ATGTCGGAACCTGTGCGCCCCTGGCCCTACCTCGCTGAAGACATCCGGGA
AGTGACGCACAACGTCCATCCTATGTGGGCTGGTGGGGTTCCAGACCCGT
GGTTCCAGCGCTATACTCGCTTCCCTCTTACTCGCGTGAGAACTATTGTC
CACTATTGTCTACTTGCACCAGGCTGCCGGTGTCACCCCGGACATAAACC
CCCTCTTGCCCCAAGCACGTCGACTGGCCAGTTCAGCGTCTCTATCCGAC
CTCGACTATGCACGAAACAATACGCCCACGACAATGTCTTCCAGCTCCCA
GCACGCCAGGAAATGGTCGACGATGCCGATCGACACGAACGCGGCCCCGT
TCTTGAGCCTCGACTTCGAGGATGAGGTTGTTTACGAGGACGAGCGACGC
CAAAGCATCAAACAGGGGACCATCTGTGGGCTGGTCGAGCAACTGACACG
CCATGATCGACTAGACGTCTCGTTCAACGAGACCTTCCTCATGACCTACC
CTACATTCGTCTGCGGCAGGGAACTCTTTGAGATTCTCCTCCAACGACTT
AACATGCCCCCTCCTCCGGGCCTTACCGACTCTGACCTCTCACGATGGAC
AGAACAGAAGCAGAAGACCGTCCGCTTCCGCGTCATTAACATACTCAAGA
CCTGGCTAGAGCGATACTGGATGGAACCACCCACCGAATCAACTATGGAC
TTCCTCCGCCACATCCACGCTCAAATCCAACCTCTCACCAACGTTCCCAC
CTGCTCGCAACTCCTCACCATCATCGAACACCGCTTGAAGGGCCAAGACA
TCCTCAAACGATACATGACTCCCCCAAACAGCACAGTGCCCAAACCACTC
ACCCCGAGGAACATGAAGAAGCTCAAGTTCCTCGACCTCGATCCGATGGA
GCTCGCCCGCCAACTCACCATCATCGAATCCCGTCTCTTCGCTCGAATCA
AACCTACCGAGTGTCTCAACAAATCATGGCAGAAGAAAGATACCGATAGG
CCGCCATCTGTTCCTGCCTCACGCCGCACCAGCACCAGCACAACCAGTAG
CACCAGCTCCATCGAACGCACCACCGGCGTCAACGCCACGATTCTACACT
CCAACCAGCTCGCAAACTGGGTAGGAGAGATGATCCTGGCCCAGGATGAG
ATGAAGAAGCGTGTCTCGCTGATCAAACAGATTGTCAATATTGCCGATGT
ATGCCCCCCTGCACCCAGCACTATCATCCTACATACTAACATACAGGTGT
GATGACAGAACTGCCGCTCCTTAAGCAACTTCGCAACCATGATGTCCCTC
ATCTCCGGCCTCGCCACAAGCCCTATCTACCGTCTCCACCGCACCTGGAC
GCAAGTGAACCCCAAGACGCGCAAACTCCTCGAAGACATGCAAAGTCTCA
TGTCCAGCGAGAAGAACTTCATCAAGTACCGAGATAAGCTACACGGGGCA
AGCCCACCATGCATTCCCTTCCTCGGTACGTCCCTTCCCCATCACCATTC
ATAACCCAACCCACACTCTCATCCACATACTAACACACCAAACCGTAATA
AAGGAACTTACCTAACCGACCTCACCTTCATTGAAGACGGCATCCCGAGC
CACACCCCACCGCCCAACGTCATGATAAACTTCAGCAAGCGGGTCAAAGT
CGCCGAGATCCTGCGCGAGATTGAGAGCTGCCAGGCCGTCGGGTACAGTT
TGCTTCCTGTCCCCGAGATACAGGAGTTTATTGTCCGGAATGTGCAAGCC
GCCGGGGGTGATGTCGAGGGGATGTATGAGAGGAGTTTGGCGCTGGAGCC
GAGGATGGTAGGCGAGGAGAGGATGAATATGGGGCAGCTGGGGGTCGGGA
TGATGGGGATGAATATGGGGAGGGGAGGGTATATTTCTACGGGGAGTCAT
ATGAGTTCGGTGGTTATTGCAAGTATGGCTATGAGGTAG back to topCoding sequence (CDS) from alignment at An03:233903..235841- >CBS51388_002502-T1 ID=CBS51388_002502-T1|Name=CBS51388_002502-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7056bp|location=Sequence derived from alignment at An03:233903..235841- (Aspergillus niger CBS 513.88)
GAACTTACCTAACCGACCTCACCTTCATTGAAGACGGCATCCCGAGCCAC
ACCCCACCGCCCAACGTCATGATAAACTTCAGCAAGCGGGTCAAAGTCGC
CGAGATCCTGCGCGAGATTGAGAGCTGCCAGGCCGTCGGGTACAGTTTGC
TTCCTGTCCCCGAGATACAGGAGTTTATTGTCCGGAATGTGCAAGCCGCC
GGGGGTGATGTCGAGGGGATGTATGAGAGGAGTTTGGCGCTGGAGCCGAG
GATGGTAGGCGAGGAGAGGATGAATATGGGGCAGCTGGGGGTCGGGATGA
TGGGGATGAATATGGGGAGGGGAGGGTATATTTCTACGGGGAGTCATATG
AGTTCGGTGGTTATTGCAAGTATGGCTATGAGGTAGAACTGCCGCTCCTT
AAGCAACTTCGCAACCATGATGTCCCTCATCTCCGGCCTCGCCACAAGCC
CTATCTACCGTCTCCACCGCACCTGGACGCAAGTGAACCCCAAGACGCGC
AAACTCCTCGAAGACATGCAAAGTCTCATGTCCAGCGAGAAGAACTTCAT
CAAGTACCGAGATAAGCTACACGGGGCAAGCCCACCATGCATTCCCTTCC
TCGGCTGCCGGTGTCACCCCGGACATAAACCCCCTCTTGCCCCAAGCACG
TCGACTGGCCAGTTCAGCGTCTCTATCCGACCTCGACTATGCACGAAACA
ATACGCCCACGACAATGTCTTCCAGCTCCCAGCACGCCAGGAAATGGTCG
ACGATGCCGATCGACACGAACGCGGCCCCGTTCTTGAGCCTCGACTTCGA
GGATGAGGTTGTTTACGAGGACGAGCGACGCCAAAGCATCAAACAGGGGA
CCATCTGTGGGCTGGTCGAGCAACTGACACGCCATGATCGACTAGACGTC
TCGTTCAACGAGACCTTCCTCATGACCTACCCTACATTCGTCTGCGGCAG
GGAACTCTTTGAGATTCTCCTCCAACGACTTAACATGCCCCCTCCTCCGG
GCCTTACCGACTCTGACCTCTCACGATGGACAGAACAGAAGCAGAAGACC
GTCCGCTTCCGCGTCATTAACATACTCAAGACCTGGCTAGAGCGATACTG
GATGGAACCACCCACCGAATCAACTATGGACTTCCTCCGCCACATCCACG
CTCAAATCCAACCTCTCACCAACGTTCCCACCTGCTCGCAACTCCTCACC
ATCATCGAACACCGCTTGAAGGGCCAAGACATCCTCAAACGATACATGAC
TCCCCCAAACAGCACAGTGCCCAAACCACTCACCCCGAGGAACATGAAGA
AGCTCAAGTTCCTCGACCTCGATCCGATGGAGCTCGCCCGCCAACTCACC
ATCATCGAATCCCGTCTCTTCGCTCGAATCAAACCTACCGAGTGTCTCAA
CAAATCATGGCAGAAGAAAGATACCGATAGGCCGCCATCTGTTCCTGCCT
CACGCCGCACCAGCACCAGCACAACCAGTAGCACCAGCTCCATCGAACGC
ACCACCGGCGTCAACGCCACGATTCTACACTCCAACCAGCTCGCAAACTG
GGTAGGAGAGATGATCCTGGCCCAGGATGAGATGAAGAAGCGTGTCTCGC
TGATCAAACAGATTGTCAATATTGCCGATATGTCGGAACCTGTGCGCCCC
TGGCCCTACCTCGCTGAAGACATCCGGGAAGTGACGCACAACGTCCATCC
TATGTGGGCTGGTGGGGTTCCAGACCCGTGGTTCCAGCGCTATACTCGCT
TCCCTCTTACTCGCGAACTTACCTAACCGACCTCACCTTCATTGAAGACG
GCATCCCGAGCCACACCCCACCGCCCAACGTCATGATAAACTTCAGCAAG
CGGGTCAAAGTCGCCGAGATCCTGCGCGAGATTGAGAGCTGCCAGGCCGT
CGGGTACAGTTTGCTTCCTGTCCCCGAGATACAGGAGTTTATTGTCCGGA
ATGTGCAAGCCGCCGGGGGTGATGTCGAGGGGATGTATGAGAGGAGTTTG
GCGCTGGAGCCGAGGATGGTAGGCGAGGAGAGGATGAATATGGGGCAGCT
GGGGGTCGGGATGATGGGGATGAATATGGGGAGGGGAGGGTATATTTCTA
CGGGGAGTCATATGAGTTCGGTGGTTATTGCAAGTATGGCTATGAGGTAG
AACTGCCGCTCCTTAAGCAACTTCGCAACCATGATGTCCCTCATCTCCGG
CCTCGCCACAAGCCCTATCTACCGTCTCCACCGCACCTGGACGCAAGTGA
ACCCCAAGACGCGCAAACTCCTCGAAGACATGCAAAGTCTCATGTCCAGC
GAGAAGAACTTCATCAAGTACCGAGATAAGCTACACGGGGCAAGCCCACC
ATGCATTCCCTTCCTCGGCTGCCGGTGTCACCCCGGACATAAACCCCCTC
TTGCCCCAAGCACGTCGACTGGCCAGTTCAGCGTCTCTATCCGACCTCGA
CTATGCACGAAACAATACGCCCACGACAATGTCTTCCAGCTCCCAGCACG
CCAGGAAATGGTCGACGATGCCGATCGACACGAACGCGGCCCCGTTCTTG
AGCCTCGACTTCGAGGATGAGGTTGTTTACGAGGACGAGCGACGCCAAAG
CATCAAACAGGGGACCATCTGTGGGCTGGTCGAGCAACTGACACGCCATG
ATCGACTAGACGTCTCGTTCAACGAGACCTTCCTCATGACCTACCCTACA
TTCGTCTGCGGCAGGGAACTCTTTGAGATTCTCCTCCAACGACTTAACAT
GCCCCCTCCTCCGGGCCTTACCGACTCTGACCTCTCACGATGGACAGAAC
AGAAGCAGAAGACCGTCCGCTTCCGCGTCATTAACATACTCAAGACCTGG
CTAGAGCGATACTGGATGGAACCACCCACCGAATCAACTATGGACTTCCT
CCGCCACATCCACGCTCAAATCCAACCTCTCACCAACGTTCCCACCTGCT
CGCAACTCCTCACCATCATCGAACACCGCTTGAAGGGCCAAGACATCCTC
AAACGATACATGACTCCCCCAAACAGCACAGTGCCCAAACCACTCACCCC
GAGGAACATGAAGAAGCTCAAGTTCCTCGACCTCGATCCGATGGAGCTCG
CCCGCCAACTCACCATCATCGAATCCCGTCTCTTCGCTCGAATCAAACCT
ACCGAGTGTCTCAACAAATCATGGCAGAAGAAAGATACCGATAGGCCGCC
ATCTGTTCCTGCCTCACGCCGCACCAGCACCAGCACAACCAGTAGCACCA
GCTCCATCGAACGCACCACCGGCGTCAACGCCACGATTCTACACTCCAAC
CAGCTCGCAAACTGGGTAGGAGAGATGATCCTGGCCCAGGATGAGATGAA
GAAGCGTGTCTCGCTGATCAAACAGATTGTCAATATTGCCGATATGTCGG
AACCTGTGCGCCCCTGGCCCTACCTCGCTGAAGACATCCGGGAAGTGACG
CACAACGTCCATCCTATGTGGGCTGGTGGGGTTCCAGACCCGTGGTTCCA
GCGCTATACTCGCTTCCCTCTTACTCGCGAACTTACCTAACCGACCTCAC
CTTCATTGAAGACGGCATCCCGAGCCACACCCCACCGCCCAACGTCATGA
TAAACTTCAGCAAGCGGGTCAAAGTCGCCGAGATCCTGCGCGAGATTGAG
AGCTGCCAGGCCGTCGGGTACAGTTTGCTTCCTGTCCCCGAGATACAGGA
GTTTATTGTCCGGAATGTGCAAGCCGCCGGGGGTGATGTCGAGGGGATGT
ATGAGAGGAGTTTGGCGCTGGAGCCGAGGATGGTAGGCGAGGAGAGGATG
AATATGGGGCAGCTGGGGGTCGGGATGATGGGGATGAATATGGGGAGGGG
AGGGTATATTTCTACGGGGAGTCATATGAGTTCGGTGGTTATTGCAAGTA
TGGCTATGAGGTAGAACTGCCGCTCCTTAAGCAACTTCGCAACCATGATG
TCCCTCATCTCCGGCCTCGCCACAAGCCCTATCTACCGTCTCCACCGCAC
CTGGACGCAAGTGAACCCCAAGACGCGCAAACTCCTCGAAGACATGCAAA
GTCTCATGTCCAGCGAGAAGAACTTCATCAAGTACCGAGATAAGCTACAC
GGGGCAAGCCCACCATGCATTCCCTTCCTCGGCTGCCGGTGTCACCCCGG
ACATAAACCCCCTCTTGCCCCAAGCACGTCGACTGGCCAGTTCAGCGTCT
CTATCCGACCTCGACTATGCACGAAACAATACGCCCACGACAATGTCTTC
CAGCTCCCAGCACGCCAGGAAATGGTCGACGATGCCGATCGACACGAACG
CGGCCCCGTTCTTGAGCCTCGACTTCGAGGATGAGGTTGTTTACGAGGAC
GAGCGACGCCAAAGCATCAAACAGGGGACCATCTGTGGGCTGGTCGAGCA
ACTGACACGCCATGATCGACTAGACGTCTCGTTCAACGAGACCTTCCTCA
TGACCTACCCTACATTCGTCTGCGGCAGGGAACTCTTTGAGATTCTCCTC
CAACGACTTAACATGCCCCCTCCTCCGGGCCTTACCGACTCTGACCTCTC
ACGATGGACAGAACAGAAGCAGAAGACCGTCCGCTTCCGCGTCATTAACA
TACTCAAGACCTGGCTAGAGCGATACTGGATGGAACCACCCACCGAATCA
ACTATGGACTTCCTCCGCCACATCCACGCTCAAATCCAACCTCTCACCAA
CGTTCCCACCTGCTCGCAACTCCTCACCATCATCGAACACCGCTTGAAGG
GCCAAGACATCCTCAAACGATACATGACTCCCCCAAACAGCACAGTGCCC
AAACCACTCACCCCGAGGAACATGAAGAAGCTCAAGTTCCTCGACCTCGA
TCCGATGGAGCTCGCCCGCCAACTCACCATCATCGAATCCCGTCTCTTCG
CTCGAATCAAACCTACCGAGTGTCTCAACAAATCATGGCAGAAGAAAGAT
ACCGATAGGCCGCCATCTGTTCCTGCCTCACGCCGCACCAGCACCAGCAC
AACCAGTAGCACCAGCTCCATCGAACGCACCACCGGCGTCAACGCCACGA
TTCTACACTCCAACCAGCTCGCAAACTGGGTAGGAGAGATGATCCTGGCC
CAGGATGAGATGAAGAAGCGTGTCTCGCTGATCAAACAGATTGTCAATAT
TGCCGATATGTCGGAACCTGTGCGCCCCTGGCCCTACCTCGCTGAAGACA
TCCGGGAAGTGACGCACAACGTCCATCCTATGTGGGCTGGTGGGGTTCCA
GACCCGTGGTTCCAGCGCTATACTCGCTTCCCTCTTACTCGCGAACTTAC
CTAACCGACCTCACCTTCATTGAAGACGGCATCCCGAGCCACACCCCACC
GCCCAACGTCATGATAAACTTCAGCAAGCGGGTCAAAGTCGCCGAGATCC
TGCGCGAGATTGAGAGCTGCCAGGCCGTCGGGTACAGTTTGCTTCCTGTC
CCCGAGATACAGGAGTTTATTGTCCGGAATGTGCAAGCCGCCGGGGGTGA
TGTCGAGGGGATGTATGAGAGGAGTTTGGCGCTGGAGCCGAGGATGGTAG
GCGAGGAGAGGATGAATATGGGGCAGCTGGGGGTCGGGATGATGGGGATG
AATATGGGGAGGGGAGGGTATATTTCTACGGGGAGTCATATGAGTTCGGT
GGTTATTGCAAGTATGGCTATGAGGTAGAACTGCCGCTCCTTAAGCAACT
TCGCAACCATGATGTCCCTCATCTCCGGCCTCGCCACAAGCCCTATCTAC
CGTCTCCACCGCACCTGGACGCAAGTGAACCCCAAGACGCGCAAACTCCT
CGAAGACATGCAAAGTCTCATGTCCAGCGAGAAGAACTTCATCAAGTACC
GAGATAAGCTACACGGGGCAAGCCCACCATGCATTCCCTTCCTCGGCTGC
CGGTGTCACCCCGGACATAAACCCCCTCTTGCCCCAAGCACGTCGACTGG
CCAGTTCAGCGTCTCTATCCGACCTCGACTATGCACGAAACAATACGCCC
ACGACAATGTCTTCCAGCTCCCAGCACGCCAGGAAATGGTCGACGATGCC
GATCGACACGAACGCGGCCCCGTTCTTGAGCCTCGACTTCGAGGATGAGG
TTGTTTACGAGGACGAGCGACGCCAAAGCATCAAACAGGGGACCATCTGT
GGGCTGGTCGAGCAACTGACACGCCATGATCGACTAGACGTCTCGTTCAA
CGAGACCTTCCTCATGACCTACCCTACATTCGTCTGCGGCAGGGAACTCT
TTGAGATTCTCCTCCAACGACTTAACATGCCCCCTCCTCCGGGCCTTACC
GACTCTGACCTCTCACGATGGACAGAACAGAAGCAGAAGACCGTCCGCTT
CCGCGTCATTAACATACTCAAGACCTGGCTAGAGCGATACTGGATGGAAC
CACCCACCGAATCAACTATGGACTTCCTCCGCCACATCCACGCTCAAATC
CAACCTCTCACCAACGTTCCCACCTGCTCGCAACTCCTCACCATCATCGA
ACACCGCTTGAAGGGCCAAGACATCCTCAAACGATACATGACTCCCCCAA
ACAGCACAGTGCCCAAACCACTCACCCCGAGGAACATGAAGAAGCTCAAG
TTCCTCGACCTCGATCCGATGGAGCTCGCCCGCCAACTCACCATCATCGA
ATCCCGTCTCTTCGCTCGAATCAAACCTACCGAGTGTCTCAACAAATCAT
GGCAGAAGAAAGATACCGATAGGCCGCCATCTGTTCCTGCCTCACGCCGC
ACCAGCACCAGCACAACCAGTAGCACCAGCTCCATCGAACGCACCACCGG
CGTCAACGCCACGATTCTACACTCCAACCAGCTCGCAAACTGGGTAGGAG
AGATGATCCTGGCCCAGGATGAGATGAAGAAGCGTGTCTCGCTGATCAAA
CAGATTGTCAATATTGCCGATATGTCGGAACCTGTGCGCCCCTGGCCCTA
CCTCGCTGAAGACATCCGGGAAGTGACGCACAACGTCCATCCTATGTGGG
CTGGTGGGGTTCCAGACCCGTGGTTCCAGCGCTATACTCGCTTCCCTCTT
ACTCGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005085 | guanyl-nucleotide exchange factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023578 |
| DBxref | InterPro:IPR019804 |
| DBxref | InterPro:IPR036964 |
| DBxref | InterPro:IPR001895 |
| DBxref | InterPro:IPR000651 |
| DBxref | PFAM:PF00618 |
| DBxref | PFAM:PF00617 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:233903..235841 - |
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