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CBS51388_002503-T1, CBS51388_002503-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002503-T1
Unique NameCBS51388_002503-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:236315..238245-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002503-T1 ID=CBS51388_002503-T1|Name=CBS51388_002503-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1931bp|location=Sequence derived from alignment at An03:236315..238245- (Aspergillus niger CBS 513.88)
ATGGGTCCTACCACCGTCACTCGAGGCCGCAATGATGTGCAGCTAGCACA
AAATGTGGCTGGAGCGGATTTCAAAGACTTTAGCTATGAGGTGCGAGTCA
CCTCTCCAAGTAACGGAGAGGAGAACCCTGATGAGATCACTCTTGAGACC
TGGCATGCAGGCGAGGCTCAAAAATCGGCCAACGTGGTGACCCAGGATGC
ACCTCGTGGTATGCAGCAGGCAGAGGCTGCAGCGTTGGCTTGGAGTAAGA
AGATTGCCTATCTCACTTATGCCCTGTGAGTCACCCACCCCGACAATGAT
ATTCCATATCTGACATGACCCTTTCGTGACCACAGGATCTGGCTCTCCTT
CTTTATGCTAGCCCTACAATCCTCAATTAGCAGCAATGTGATCCAGAATG
CCTACGCCACCTTTGAAGCTGCCCCTCAAGTGAGCACTGCAAGCATTGCA
GCCAGCGTGATCAGCGGTGTCGTCAGACTCCCAGCTGCGAAATTGTTGAA
CGTCTGGGGAAGAACAGAAGGATTTCTAGTCTTCGTCGGTGTTTACCTCC
TTGGACTTGTCATTCTTGCAGCGTGTAACAACCCCAGCTCCTATGCAGCC
GGTTATGTGCTCTACTGGGTCGGCTATGATGCGGTTTATCTCATTCTCGA
TGTATTCATGGCCGATACTGCCGGGATGCGTAACCGAGCCTTTGCCTTTG
GTTTCGCCAGCACTCCTTTTATCTGCACGGCATTCACCGGCCCCTTGGCA
GCAGAGTCATTCATCAAGACAGCATCATGGCGCTGGGCATACGGTGTCTT
TGCTATTGTGATGCCATTTGTATTCATTCCTCTGGCCGTGATATTCAAAT
TCTACCAACGAAAGGCGGAGAGTATGTATATCTACGGTCGGGAGCCGAGT
GGTCGGACTGTTCTTGAATCAATAGTCCATTACTTTCACGAATTTGATGG
TGAGTACAATTCCTAGCCTCAATTGACACCACTAATCAATTTGTAGTAAT
CGGTGCATTTCTCTTGACCGCTGCCTTCCTCCTCCTTCTCCTCCCATTCA
GTCTCGCATCGTACGGACGCGCCGAGTATAAGAGTGCCACTTTCATCTGT
ATGATTGTCATCGGATTTGTGCTGTTCTTTGTGTTTGGCCTCTGGGAGCG
ATTCGGGGCGCGCAATCACTTCATCAAATGGCGAGTATTCAAGCAGCCCA
CGGTAGTAGGGGCCTGCGGTCTTGCAGGGTGCCTCTTCTTTAGTTACTAC
ACTTGGGAGCTTTACTTCTACAACTTCTGCATGGTTGTCTACGAGCTGAG
CATCGGCATGGCCGGCTACGTCGGGCAGATCTACAACGTGGGCTCATGCT
TCTGGTCTGCTGTCTTCGGTATAGCTGTCTATCTCACACGGCAGTTCAAG
TATACCTGTTTGGGATTCGGACTACCCCTGGTCTTACTTGGGGCAGGGTT
GATGATCCACTTTCGATCGGCTGGTGGAGGCATCGGGTATATTGTGATGT
GTCAGATATTCATTGCCTTTGGTGGTGGCACCCTAGTCATCGGTGAAGAC
ATGGCAGTCATGGCTGCCTCAGATCGTGAGGGTGTCCCCATGATGCTTTC
CTTGATTGGTCTCTTCTCGAGTCTGGGCGGTGCCGTAGGCTATGCAGTTG
CGGCTGCGATCTACACCAACACCTTCCCTGGTGCACTGAGGGATGCATTA
CCCGAGGGCAGCAAGGACAAAGCGATGGAGATCTACGTGGGCGGGTATAT
CACGCAGCTCAAGTATCCCGTTGGTTCCGCTATTCGTGATGCCATTAATA
CGGCCTACGGCGTCTACATGAAATACGCGTGTATTGCAGCCGTGGTAGCG
ATGGCCCTGGGGATCCCCTGCGTGGCCATGTGGAAGAACTTCCGGCTGAA
CAAGCCACAGAACAAGGGCGAGGTGATGTGA
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Coding sequence (CDS) from alignment at An03:236315..238245-

>CBS51388_002503-T1 ID=CBS51388_002503-T1|Name=CBS51388_002503-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5472bp|location=Sequence derived from alignment at An03:236315..238245- (Aspergillus niger CBS 513.88)
TAATCGGTGCATTTCTCTTGACCGCTGCCTTCCTCCTCCTTCTCCTCCCA
TTCAGTCTCGCATCGTACGGACGCGCCGAGTATAAGAGTGCCACTTTCAT
CTGTATGATTGTCATCGGATTTGTGCTGTTCTTTGTGTTTGGCCTCTGGG
AGCGATTCGGGGCGCGCAATCACTTCATCAAATGGCGAGTATTCAAGCAG
CCCACGGTAGTAGGGGCCTGCGGTCTTGCAGGGTGCCTCTTCTTTAGTTA
CTACACTTGGGAGCTTTACTTCTACAACTTCTGCATGGTTGTCTACGAGC
TGAGCATCGGCATGGCCGGCTACGTCGGGCAGATCTACAACGTGGGCTCA
TGCTTCTGGTCTGCTGTCTTCGGTATAGCTGTCTATCTCACACGGCAGTT
CAAGTATACCTGTTTGGGATTCGGACTACCCCTGGTCTTACTTGGGGCAG
GGTTGATGATCCACTTTCGATCGGCTGGTGGAGGCATCGGGTATATTGTG
ATGTGTCAGATATTCATTGCCTTTGGTGGTGGCACCCTAGTCATCGGTGA
AGACATGGCAGTCATGGCTGCCTCAGATCGTGAGGGTGTCCCCATGATGC
TTTCCTTGATTGGTCTCTTCTCGAGTCTGGGCGGTGCCGTAGGCTATGCA
GTTGCGGCTGCGATCTACACCAACACCTTCCCTGGTGCACTGAGGGATGC
ATTACCCGAGGGCAGCAAGGACAAAGCGATGGAGATCTACGTGGGCGGGT
ATATCACGCAGCTCAAGTATCCCGTTGGTTCCGCTATTCGTGATGCCATT
AATACGGCCTACGGCGTCTACATGAAATACGCGTGTATTGCAGCCGTGGT
AGCGATGGCCCTGGGGATCCCCTGCGTGGCCATGTGGAAGAACTTCCGGC
TGAACAAGCCACAGAACAAGGGCGAGGTGATGTGAGATCTGGCTCTCCTT
CTTTATGCTAGCCCTACAATCCTCAATTAGCAGCAATGTGATCCAGAATG
CCTACGCCACCTTTGAAGCTGCCCCTCAAGTGAGCACTGCAAGCATTGCA
GCCAGCGTGATCAGCGGTGTCGTCAGACTCCCAGCTGCGAAATTGTTGAA
CGTCTGGGGAAGAACAGAAGGATTTCTAGTCTTCGTCGGTGTTTACCTCC
TTGGACTTGTCATTCTTGCAGCGTGTAACAACCCCAGCTCCTATGCAGCC
GGTTATGTGCTCTACTGGGTCGGCTATGATGCGGTTTATCTCATTCTCGA
TGTATTCATGGCCGATACTGCCGGGATGCGTAACCGAGCCTTTGCCTTTG
GTTTCGCCAGCACTCCTTTTATCTGCACGGCATTCACCGGCCCCTTGGCA
GCAGAGTCATTCATCAAGACAGCATCATGGCGCTGGGCATACGGTGTCTT
TGCTATTGTGATGCCATTTGTATTCATTCCTCTGGCCGTGATATTCAAAT
TCTACCAACGAAAGGCGGAGAGTATGTATATCTACGGTCGGGAGCCGAGT
GGTCGGACTGTTCTTGAATCAATAGTCCATTACTTTCACGAATTTGATGA
TGGGTCCTACCACCGTCACTCGAGGCCGCAATGATGTGCAGCTAGCACAA
AATGTGGCTGGAGCGGATTTCAAAGACTTTAGCTATGAGGTGCGAGTCAC
CTCTCCAAGTAACGGAGAGGAGAACCCTGATGAGATCACTCTTGAGACCT
GGCATGCAGGCGAGGCTCAAAAATCGGCCAACGTGGTGACCCAGGATGCA
CCTCGTGGTATGCAGCAGGCAGAGGCTGCAGCGTTGGCTTGGAGTAAGAA
GATTGCCTATCTCACTTATGCCCTTAATCGGTGCATTTCTCTTGACCGCT
GCCTTCCTCCTCCTTCTCCTCCCATTCAGTCTCGCATCGTACGGACGCGC
CGAGTATAAGAGTGCCACTTTCATCTGTATGATTGTCATCGGATTTGTGC
TGTTCTTTGTGTTTGGCCTCTGGGAGCGATTCGGGGCGCGCAATCACTTC
ATCAAATGGCGAGTATTCAAGCAGCCCACGGTAGTAGGGGCCTGCGGTCT
TGCAGGGTGCCTCTTCTTTAGTTACTACACTTGGGAGCTTTACTTCTACA
ACTTCTGCATGGTTGTCTACGAGCTGAGCATCGGCATGGCCGGCTACGTC
GGGCAGATCTACAACGTGGGCTCATGCTTCTGGTCTGCTGTCTTCGGTAT
AGCTGTCTATCTCACACGGCAGTTCAAGTATACCTGTTTGGGATTCGGAC
TACCCCTGGTCTTACTTGGGGCAGGGTTGATGATCCACTTTCGATCGGCT
GGTGGAGGCATCGGGTATATTGTGATGTGTCAGATATTCATTGCCTTTGG
TGGTGGCACCCTAGTCATCGGTGAAGACATGGCAGTCATGGCTGCCTCAG
ATCGTGAGGGTGTCCCCATGATGCTTTCCTTGATTGGTCTCTTCTCGAGT
CTGGGCGGTGCCGTAGGCTATGCAGTTGCGGCTGCGATCTACACCAACAC
CTTCCCTGGTGCACTGAGGGATGCATTACCCGAGGGCAGCAAGGACAAAG
CGATGGAGATCTACGTGGGCGGGTATATCACGCAGCTCAAGTATCCCGTT
GGTTCCGCTATTCGTGATGCCATTAATACGGCCTACGGCGTCTACATGAA
ATACGCGTGTATTGCAGCCGTGGTAGCGATGGCCCTGGGGATCCCCTGCG
TGGCCATGTGGAAGAACTTCCGGCTGAACAAGCCACAGAACAAGGGCGAG
GTGATGTGAGATCTGGCTCTCCTTCTTTATGCTAGCCCTACAATCCTCAA
TTAGCAGCAATGTGATCCAGAATGCCTACGCCACCTTTGAAGCTGCCCCT
CAAGTGAGCACTGCAAGCATTGCAGCCAGCGTGATCAGCGGTGTCGTCAG
ACTCCCAGCTGCGAAATTGTTGAACGTCTGGGGAAGAACAGAAGGATTTC
TAGTCTTCGTCGGTGTTTACCTCCTTGGACTTGTCATTCTTGCAGCGTGT
AACAACCCCAGCTCCTATGCAGCCGGTTATGTGCTCTACTGGGTCGGCTA
TGATGCGGTTTATCTCATTCTCGATGTATTCATGGCCGATACTGCCGGGA
TGCGTAACCGAGCCTTTGCCTTTGGTTTCGCCAGCACTCCTTTTATCTGC
ACGGCATTCACCGGCCCCTTGGCAGCAGAGTCATTCATCAAGACAGCATC
ATGGCGCTGGGCATACGGTGTCTTTGCTATTGTGATGCCATTTGTATTCA
TTCCTCTGGCCGTGATATTCAAATTCTACCAACGAAAGGCGGAGAGTATG
TATATCTACGGTCGGGAGCCGAGTGGTCGGACTGTTCTTGAATCAATAGT
CCATTACTTTCACGAATTTGATGATGGGTCCTACCACCGTCACTCGAGGC
CGCAATGATGTGCAGCTAGCACAAAATGTGGCTGGAGCGGATTTCAAAGA
CTTTAGCTATGAGGTGCGAGTCACCTCTCCAAGTAACGGAGAGGAGAACC
CTGATGAGATCACTCTTGAGACCTGGCATGCAGGCGAGGCTCAAAAATCG
GCCAACGTGGTGACCCAGGATGCACCTCGTGGTATGCAGCAGGCAGAGGC
TGCAGCGTTGGCTTGGAGTAAGAAGATTGCCTATCTCACTTATGCCCTTA
ATCGGTGCATTTCTCTTGACCGCTGCCTTCCTCCTCCTTCTCCTCCCATT
CAGTCTCGCATCGTACGGACGCGCCGAGTATAAGAGTGCCACTTTCATCT
GTATGATTGTCATCGGATTTGTGCTGTTCTTTGTGTTTGGCCTCTGGGAG
CGATTCGGGGCGCGCAATCACTTCATCAAATGGCGAGTATTCAAGCAGCC
CACGGTAGTAGGGGCCTGCGGTCTTGCAGGGTGCCTCTTCTTTAGTTACT
ACACTTGGGAGCTTTACTTCTACAACTTCTGCATGGTTGTCTACGAGCTG
AGCATCGGCATGGCCGGCTACGTCGGGCAGATCTACAACGTGGGCTCATG
CTTCTGGTCTGCTGTCTTCGGTATAGCTGTCTATCTCACACGGCAGTTCA
AGTATACCTGTTTGGGATTCGGACTACCCCTGGTCTTACTTGGGGCAGGG
TTGATGATCCACTTTCGATCGGCTGGTGGAGGCATCGGGTATATTGTGAT
GTGTCAGATATTCATTGCCTTTGGTGGTGGCACCCTAGTCATCGGTGAAG
ACATGGCAGTCATGGCTGCCTCAGATCGTGAGGGTGTCCCCATGATGCTT
TCCTTGATTGGTCTCTTCTCGAGTCTGGGCGGTGCCGTAGGCTATGCAGT
TGCGGCTGCGATCTACACCAACACCTTCCCTGGTGCACTGAGGGATGCAT
TACCCGAGGGCAGCAAGGACAAAGCGATGGAGATCTACGTGGGCGGGTAT
ATCACGCAGCTCAAGTATCCCGTTGGTTCCGCTATTCGTGATGCCATTAA
TACGGCCTACGGCGTCTACATGAAATACGCGTGTATTGCAGCCGTGGTAG
CGATGGCCCTGGGGATCCCCTGCGTGGCCATGTGGAAGAACTTCCGGCTG
AACAAGCCACAGAACAAGGGCGAGGTGATGTGAGATCTGGCTCTCCTTCT
TTATGCTAGCCCTACAATCCTCAATTAGCAGCAATGTGATCCAGAATGCC
TACGCCACCTTTGAAGCTGCCCCTCAAGTGAGCACTGCAAGCATTGCAGC
CAGCGTGATCAGCGGTGTCGTCAGACTCCCAGCTGCGAAATTGTTGAACG
TCTGGGGAAGAACAGAAGGATTTCTAGTCTTCGTCGGTGTTTACCTCCTT
GGACTTGTCATTCTTGCAGCGTGTAACAACCCCAGCTCCTATGCAGCCGG
TTATGTGCTCTACTGGGTCGGCTATGATGCGGTTTATCTCATTCTCGATG
TATTCATGGCCGATACTGCCGGGATGCGTAACCGAGCCTTTGCCTTTGGT
TTCGCCAGCACTCCTTTTATCTGCACGGCATTCACCGGCCCCTTGGCAGC
AGAGTCATTCATCAAGACAGCATCATGGCGCTGGGCATACGGTGTCTTTG
CTATTGTGATGCCATTTGTATTCATTCCTCTGGCCGTGATATTCAAATTC
TACCAACGAAAGGCGGAGAGTATGTATATCTACGGTCGGGAGCCGAGTGG
TCGGACTGTTCTTGAATCAATAGTCCATTACTTTCACGAATTTGATGATG
GGTCCTACCACCGTCACTCGAGGCCGCAATGATGTGCAGCTAGCACAAAA
TGTGGCTGGAGCGGATTTCAAAGACTTTAGCTATGAGGTGCGAGTCACCT
CTCCAAGTAACGGAGAGGAGAACCCTGATGAGATCACTCTTGAGACCTGG
CATGCAGGCGAGGCTCAAAAATCGGCCAACGTGGTGACCCAGGATGCACC
TCGTGGTATGCAGCAGGCAGAGGCTGCAGCGTTGGCTTGGAGTAAGAAGA
TTGCCTATCTCACTTATGCCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SIT2_1CBS51388_002503Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002503-T1CBS51388_002503-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002503-T1.cdsCBS51388_002503-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002503-T1.exon3CBS51388_002503-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002503-T1.exon2CBS51388_002503-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002503-T1.exon1CBS51388_002503-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
ProductSiderochrome iron transporter 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:236315..238245 -
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