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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:372473..373531+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002548-T1 ID=CBS51388_002548-T1|Name=CBS51388_002548-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1059bp|location=Sequence derived from alignment at An03:372473..373531+ (Aspergillus niger CBS 513.88)
ATGGAAAGCTCCTTAGCAAACAGTCCTACGGCATCTCGTATAGCGCCAAT
AACGACGCCTGCAGAAAGTTCCCCAGCCCAGCCCGTCGCAAAGAAGCGCA
AATATGAAGCTATGGAGCCTCCTAGCTCTCCCAGTATATCAAGTAAGATT
AAGAAGGAGATCAACAGGAAAGATGTGAGTGAGGCTGTTAGTACTTGTTT
CCCTGTGATCCCCTTTGCTCTGACTCTAACTCAGGTGCAGTGCCTTGATC
GGGATCGAGTTTGTATCATCTCCAAGGCGACAGATCCCTTGCATGCCGCC
CATATAATACCGGCTTCGGTTTGTGACACTACTACACCTACCAAGAAGCT
CAAGTTCCTCGAATTTAAAGCCTTGCTGAGGATGTTTTGGTCGCAAGAGA
CAATCCAGAGATGGCTCGAAGGCAAGAAGAGTATCCTCATGTCAGTAGGA
AATCTAGTAGCTCTGAGTCCCACTTGTCATACATATTGGGACAGAGCGCT
GTTTGGTTTGATGCCATTCCGGGTATCAGAAGACCATAAGTCCATGGAAT
TGCATTTTTACTGGCTATGTGGCAAGGGACTTCCCGCTACCGGCAATTCA
TCGCTCCTGATCAATGACAGTGAAGGAAATTCTACTATATCACCAATAAT
GATGCCTGAAACAGGCCAGAAGGGAGGAAGAGCGCACCATGTTGATGTAG
CCACTCCTAATCTGAAACTCTACAATAACGATTCAGATACTGTCATCTGC
TCAGGGGATACCATTATTATCACAACACCAGATCCCCAAAACCTACAGCT
TCCTGATGAAGGTTTCTTTGCCCTCCAGTGGACACTCCATCGGCTGGCTG
CAATGTGCGCTGGTGCAGGCTGGCAGCCAGCCGATAGAGACGATGATGAG
GATGATGATGACGATCTGTGTCTCGATAATTCAGTTGAAAGCCCTACACC
AATTTCAGAACGGGTTAGCAAATGTCACTTGAGAGAGGTTAAGAAGTCTT
ATTTCCAAAAGGCCATGGCAGATGCACTCAGCTCGTGGAATGTCGATCAT
GCCTACTGA back to topCoding sequence (CDS) from alignment at An03:372473..373531+ >CBS51388_002548-T1 ID=CBS51388_002548-T1|Name=CBS51388_002548-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1998bp|location=Sequence derived from alignment at An03:372473..373531+ (Aspergillus niger CBS 513.88)
ATGGAAAGCTCCTTAGCAAACAGTCCTACGGCATCTCGTATAGCGCCAAT
AACGACGCCTGCAGAAAGTTCCCCAGCCCAGCCCGTCGCAAAGAAGCGCA
AATATGAAGCTATGGAGCCTCCTAGCTCTCCCAGTATATCAAGTAAGATT
AAGAAGGAGATCAACAGGAAAGATGTGCAGTGCCTTGATCGGGATCGAGT
TTGTATCATCTCCAAGGCGACAGATCCCTTGCATGCCGCCCATATAATAC
CGGCTTCGGTTTGTGACACTACTACACCTACCAAGAAGCTCAAGTTCCTC
GAATTTAAAGCCTTGCTGAGGATGTTTTGGTCGCAAGAGACAATCCAGAG
ATGGCTCGAAGGCAAGAAGAGTATCCTCATGTCAGTAGGAAATCTAGTAG
CTCTGAGTCCCACTTGTCATACATATTGGGACAGAGCGCTGTTTGGTTTG
ATGCCATTCCGGGTATCAGAAGACCATAAGTCCATGGAATTGCATTTTTA
CTGGCTATGTGGCAAGGGACTTCCCGCTACCGGCAATTCATCGCTCCTGA
TCAATGACAGTGAAGGAAATTCTACTATATCACCAATAATGATGCCTGAA
ACAGGCCAGAAGGGAGGAAGAGCGCACCATGTTGATGTAGCCACTCCTAA
TCTGAAACTCTACAATAACGATTCAGATACTGTCATCTGCTCAGGGGATA
CCATTATTATCACAACACCAGATCCCCAAAACCTACAGCTTCCTGATGAA
GGTTTCTTTGCCCTCCAGTGGACACTCCATCGGCTGGCTGCAATGTGCGC
TGGTGCAGGCTGGCAGCCAGCCGATAGAGACGATGATGAGGATGATGATG
ACGATCTGTGTCTCGATAATTCAGTTGAAAGCCCTACACCAATTTCAGAA
CGGGTTAGCAAATGTCACTTGAGAGAGGTTAAGAAGTCTTATTTCCAAAA
GGCCATGGCAGATGCACTCAGCTCGTGGAATGTCGATCATGCCTACTGAA
TGGAAAGCTCCTTAGCAAACAGTCCTACGGCATCTCGTATAGCGCCAATA
ACGACGCCTGCAGAAAGTTCCCCAGCCCAGCCCGTCGCAAAGAAGCGCAA
ATATGAAGCTATGGAGCCTCCTAGCTCTCCCAGTATATCAAGTAAGATTA
AGAAGGAGATCAACAGGAAAGATGTGCAGTGCCTTGATCGGGATCGAGTT
TGTATCATCTCCAAGGCGACAGATCCCTTGCATGCCGCCCATATAATACC
GGCTTCGGTTTGTGACACTACTACACCTACCAAGAAGCTCAAGTTCCTCG
AATTTAAAGCCTTGCTGAGGATGTTTTGGTCGCAAGAGACAATCCAGAGA
TGGCTCGAAGGCAAGAAGAGTATCCTCATGTCAGTAGGAAATCTAGTAGC
TCTGAGTCCCACTTGTCATACATATTGGGACAGAGCGCTGTTTGGTTTGA
TGCCATTCCGGGTATCAGAAGACCATAAGTCCATGGAATTGCATTTTTAC
TGGCTATGTGGCAAGGGACTTCCCGCTACCGGCAATTCATCGCTCCTGAT
CAATGACAGTGAAGGAAATTCTACTATATCACCAATAATGATGCCTGAAA
CAGGCCAGAAGGGAGGAAGAGCGCACCATGTTGATGTAGCCACTCCTAAT
CTGAAACTCTACAATAACGATTCAGATACTGTCATCTGCTCAGGGGATAC
CATTATTATCACAACACCAGATCCCCAAAACCTACAGCTTCCTGATGAAG
GTTTCTTTGCCCTCCAGTGGACACTCCATCGGCTGGCTGCAATGTGCGCT
GGTGCAGGCTGGCAGCCAGCCGATAGAGACGATGATGAGGATGATGATGA
CGATCTGTGTCTCGATAATTCAGTTGAAAGCCCTACACCAATTTCAGAAC
GGGTTAGCAAATGTCACTTGAGAGAGGTTAAGAAGTCTTATTTCCAAAAG
GCCATGGCAGATGCACTCAGCTCGTGGAATGTCGATCATGCCTACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.4 |
| DBxref | InterPro:IPR003615 |
| DBxref | PFAM:PF13391 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:372473..373531 + |
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