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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:379883..381190- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002551-T1 ID=CBS51388_002551-T1|Name=CBS51388_002551-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1308bp|location=Sequence derived from alignment at An03:379883..381190- (Aspergillus niger CBS 513.88)
ATGCCTACCATCGGCCAAGTTTACCAGCTTTCCAAGACTGAAGAAGATAC
TTCAACGATTGGTACTGCGTACGGAGATATCAGGTATATTCAAGATATTC
TTTCATATATCCTTAGGGGACTAGCTGTAATTTGGGAACAGCCATGACGA
TTGAATCCCTGCCTTCTTATTGCATCACAACTAGTCAAGCCATACTAACC
TCTACAGCATTCTCGGCCAGAAGGTCCGCAAGACCCAGTTTGCCAATCCT
TTGAATCAAGCCATCCTTTTTCTCCATCCACACTTGACCCAAACCTACAA
CCCACTCAAAGGCCGAACTCTGAGCACCAATGGCCCTATCCGCGCTGGAG
AGCTCCTCATGGCCGACCTCCCCTATGCCGTGCTGCCAACCGTGGCCGTT
GGGGGTGGCGACGACTCCATTTGCAGCAACCTGGGCTGCAGTCGACGCGT
TTCCCGGCATGCAGCAAATAGCGTTACATGCGAGACTGGTTGCTCTCTCG
ATATCTGGTGGTGTAACGAGTCCTGCAAAGATGAAGACCAGGCCCGTCAC
GACGTCGAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTTCTCCGCCAGGA
ACTCGGCGATCACGATTATTACATGCTTTGGATCATCATCCGACTCCTTG
CAGCCCGGTACCTCGAGCTCCAAGGCACAACGCCAACCAACGTTCACCAG
CAACTCACATTCCAAGATCGCTTCGTTAGCGGCTGGAAAAGGCGTCCAGC
TCCTCCGAAGCAACCGTGACTCCTGGCCTACATCTCAGCTTCAACACTGG
TCCACTCTAGCCGAAAAATATTTGCTACAATCTTCGCTCCTCCCGGAAAC
CCTCGACCTCGATACCCTCGTCGACCTGATCTGCGCCGAGGAAACCAACG
TTTTCGAACTTTGCCCCGGCCCGACGGAGATCATCCCACACCAATCTCCG
GGCGTCGAGCGCGGCACGCAGTACGGCCTAGCTGTGTTTCTGCGCATCAC
GCTCGCAAATCACTCTTGCGCGCCCAATGTAAGTACACATCCCACTTCCC
GCCCAACTGCGTGTCCCCAAGTTGACCTGTCGCTCACTAACTCAACCCAC
CACGTAGGTGACACACCAAGCCGACGACCGTGGTCGAATGATGGTGACTG
CACTGCGGGACATCGCGCCAGGCGAGGAGTGTTGTACCTCCTACTTCGAC
CTGTCTGAATACGTTGACCTGCAGGCACGTCGAAAGAAAACTCAGGAGTT
GTTCACATTCACGTGTACGTGCCCGAGGTGTTTGCAGGAGGAACGGGCCC
AGAATTAG back to topCoding sequence (CDS) from alignment at An03:379883..381190- >CBS51388_002551-T1 ID=CBS51388_002551-T1|Name=CBS51388_002551-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4248bp|location=Sequence derived from alignment at An03:379883..381190- (Aspergillus niger CBS 513.88)
GTGACACACCAAGCCGACGACCGTGGTCGAATGATGGTGACTGCACTGCG
GGACATCGCGCCAGGCGAGGAGTGTTGTACCTCCTACTTCGACCTGTCTG
AATACGTTGACCTGCAGGCACGTCGAAAGAAAACTCAGGAGTTGTTCACA
TTCACGTGTACGTGCCCGAGGTGTTTGCAGGAGGAACGGGCCCAGAATTA
GCAACTCACATTCCAAGATCGCTTCGTTAGCGGCTGGAAAAGGCGTCCAG
CTCCTCCGAAGCAACCGTGACTCCTGGCCTACATCTCAGCTTCAACACTG
GTCCACTCTAGCCGAAAAATATTTGCTACAATCTTCGCTCCTCCCGGAAA
CCCTCGACCTCGATACCCTCGTCGACCTGATCTGCGCCGAGGAAACCAAC
GTTTTCGAACTTTGCCCCGGCCCGACGGAGATCATCCCACACCAATCTCC
GGGCGTCGAGCGCGGCACGCAGTACGGCCTAGCTGTGTTTCTGCGCATCA
CGCTCGCAAATCACTCTTGCGCGCCCAATCATTCTCGGCCAGAAGGTCCG
CAAGACCCAGTTTGCCAATCCTTTGAATCAAGCCATCCTTTTTCTCCATC
CACACTTGACCCAAACCTACAACCCACTCAAAGGCCGAACTCTGAGCACC
AATGGCCCTATCCGCGCTGGAGAGCTCCTCATGGCCGACCTCCCCTATGC
CGTGCTGCCAACCGTGGCCGTTGGGGGTGGCGACGACTCCATTTGCAGCA
ACCTGGGCTGCAGTCGACGCGTTTCCCGGCATGCAGCAAATAGCGTTACA
TGCGAGACTGGTTGCTCTCTCGATATCTGGTGGTGTAACGAGTCCTGCAA
AGATGAAGACCAGGCCCGTCACGACGTCGAGTGCGCCTGGCTGAAGAAGT
ACAGCCCCGTTCTCCGCCAGGAACTCGGCGATCACGATTATTACATGCTT
TGGATCATCATCCGACTCCTTGCAGCCCGATGCCTACCATCGGCCAAGTT
TACCAGCTTTCCAAGACTGAAGAAGATACTTCAACGATTGGTACTGCGTA
CGGAGATATCAGGTGACACACCAAGCCGACGACCGTGGTCGAATGATGGT
GACTGCACTGCGGGACATCGCGCCAGGCGAGGAGTGTTGTACCTCCTACT
TCGACCTGTCTGAATACGTTGACCTGCAGGCACGTCGAAAGAAAACTCAG
GAGTTGTTCACATTCACGTGTACGTGCCCGAGGTGTTTGCAGGAGGAACG
GGCCCAGAATTAGCAACTCACATTCCAAGATCGCTTCGTTAGCGGCTGGA
AAAGGCGTCCAGCTCCTCCGAAGCAACCGTGACTCCTGGCCTACATCTCA
GCTTCAACACTGGTCCACTCTAGCCGAAAAATATTTGCTACAATCTTCGC
TCCTCCCGGAAACCCTCGACCTCGATACCCTCGTCGACCTGATCTGCGCC
GAGGAAACCAACGTTTTCGAACTTTGCCCCGGCCCGACGGAGATCATCCC
ACACCAATCTCCGGGCGTCGAGCGCGGCACGCAGTACGGCCTAGCTGTGT
TTCTGCGCATCACGCTCGCAAATCACTCTTGCGCGCCCAATCATTCTCGG
CCAGAAGGTCCGCAAGACCCAGTTTGCCAATCCTTTGAATCAAGCCATCC
TTTTTCTCCATCCACACTTGACCCAAACCTACAACCCACTCAAAGGCCGA
ACTCTGAGCACCAATGGCCCTATCCGCGCTGGAGAGCTCCTCATGGCCGA
CCTCCCCTATGCCGTGCTGCCAACCGTGGCCGTTGGGGGTGGCGACGACT
CCATTTGCAGCAACCTGGGCTGCAGTCGACGCGTTTCCCGGCATGCAGCA
AATAGCGTTACATGCGAGACTGGTTGCTCTCTCGATATCTGGTGGTGTAA
CGAGTCCTGCAAAGATGAAGACCAGGCCCGTCACGACGTCGAGTGCGCCT
GGCTGAAGAAGTACAGCCCCGTTCTCCGCCAGGAACTCGGCGATCACGAT
TATTACATGCTTTGGATCATCATCCGACTCCTTGCAGCCCGATGCCTACC
ATCGGCCAAGTTTACCAGCTTTCCAAGACTGAAGAAGATACTTCAACGAT
TGGTACTGCGTACGGAGATATCAGGTGACACACCAAGCCGACGACCGTGG
TCGAATGATGGTGACTGCACTGCGGGACATCGCGCCAGGCGAGGAGTGTT
GTACCTCCTACTTCGACCTGTCTGAATACGTTGACCTGCAGGCACGTCGA
AAGAAAACTCAGGAGTTGTTCACATTCACGTGTACGTGCCCGAGGTGTTT
GCAGGAGGAACGGGCCCAGAATTAGCAACTCACATTCCAAGATCGCTTCG
TTAGCGGCTGGAAAAGGCGTCCAGCTCCTCCGAAGCAACCGTGACTCCTG
GCCTACATCTCAGCTTCAACACTGGTCCACTCTAGCCGAAAAATATTTGC
TACAATCTTCGCTCCTCCCGGAAACCCTCGACCTCGATACCCTCGTCGAC
CTGATCTGCGCCGAGGAAACCAACGTTTTCGAACTTTGCCCCGGCCCGAC
GGAGATCATCCCACACCAATCTCCGGGCGTCGAGCGCGGCACGCAGTACG
GCCTAGCTGTGTTTCTGCGCATCACGCTCGCAAATCACTCTTGCGCGCCC
AATCATTCTCGGCCAGAAGGTCCGCAAGACCCAGTTTGCCAATCCTTTGA
ATCAAGCCATCCTTTTTCTCCATCCACACTTGACCCAAACCTACAACCCA
CTCAAAGGCCGAACTCTGAGCACCAATGGCCCTATCCGCGCTGGAGAGCT
CCTCATGGCCGACCTCCCCTATGCCGTGCTGCCAACCGTGGCCGTTGGGG
GTGGCGACGACTCCATTTGCAGCAACCTGGGCTGCAGTCGACGCGTTTCC
CGGCATGCAGCAAATAGCGTTACATGCGAGACTGGTTGCTCTCTCGATAT
CTGGTGGTGTAACGAGTCCTGCAAAGATGAAGACCAGGCCCGTCACGACG
TCGAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTTCTCCGCCAGGAACTC
GGCGATCACGATTATTACATGCTTTGGATCATCATCCGACTCCTTGCAGC
CCGATGCCTACCATCGGCCAAGTTTACCAGCTTTCCAAGACTGAAGAAGA
TACTTCAACGATTGGTACTGCGTACGGAGATATCAGGTGACACACCAAGC
CGACGACCGTGGTCGAATGATGGTGACTGCACTGCGGGACATCGCGCCAG
GCGAGGAGTGTTGTACCTCCTACTTCGACCTGTCTGAATACGTTGACCTG
CAGGCACGTCGAAAGAAAACTCAGGAGTTGTTCACATTCACGTGTACGTG
CCCGAGGTGTTTGCAGGAGGAACGGGCCCAGAATTAGCAACTCACATTCC
AAGATCGCTTCGTTAGCGGCTGGAAAAGGCGTCCAGCTCCTCCGAAGCAA
CCGTGACTCCTGGCCTACATCTCAGCTTCAACACTGGTCCACTCTAGCCG
AAAAATATTTGCTACAATCTTCGCTCCTCCCGGAAACCCTCGACCTCGAT
ACCCTCGTCGACCTGATCTGCGCCGAGGAAACCAACGTTTTCGAACTTTG
CCCCGGCCCGACGGAGATCATCCCACACCAATCTCCGGGCGTCGAGCGCG
GCACGCAGTACGGCCTAGCTGTGTTTCTGCGCATCACGCTCGCAAATCAC
TCTTGCGCGCCCAATCATTCTCGGCCAGAAGGTCCGCAAGACCCAGTTTG
CCAATCCTTTGAATCAAGCCATCCTTTTTCTCCATCCACACTTGACCCAA
ACCTACAACCCACTCAAAGGCCGAACTCTGAGCACCAATGGCCCTATCCG
CGCTGGAGAGCTCCTCATGGCCGACCTCCCCTATGCCGTGCTGCCAACCG
TGGCCGTTGGGGGTGGCGACGACTCCATTTGCAGCAACCTGGGCTGCAGT
CGACGCGTTTCCCGGCATGCAGCAAATAGCGTTACATGCGAGACTGGTTG
CTCTCTCGATATCTGGTGGTGTAACGAGTCCTGCAAAGATGAAGACCAGG
CCCGTCACGACGTCGAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTTCTC
CGCCAGGAACTCGGCGATCACGATTATTACATGCTTTGGATCATCATCCG
ACTCCTTGCAGCCCGATGCCTACCATCGGCCAAGTTTACCAGCTTTCCAA
GACTGAAGAAGATACTTCAACGATTGGTACTGCGTACGGAGATATCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.4 |
| DBxref | InterPro:IPR001214 |
| DBxref | PFAM:PF00856 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:379883..381190 - |
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