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CBS51388_002558-T1, CBS51388_002558-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002558-T1
Unique NameCBS51388_002558-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:395419..396821-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002558-T1 ID=CBS51388_002558-T1|Name=CBS51388_002558-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1403bp|location=Sequence derived from alignment at An03:395419..396821- (Aspergillus niger CBS 513.88)
ATGTTGCTAACTACTGTCACCCAGTCATTCCAGTCTTATGCTCTTCGACT
GGTGCAAGACACCCTACGGCGAATTTCAGCCCCGGTAAAATTGATCGATA
ATGTTAGCGAAGAGGAGAAAATACTGTACGATGACTCGGAAATCGCAGAT
TCCGAAAAAGCGATTGTCCGCGTCAAAGATGTGAACTTTTGGAAAAGGGC
GTTTCTCGATTTCGATCTGGTACGTATCCGGCAGATTCATGAGGGGCTTG
CTATTAACAATTAATACCTGCAAGGGGTTTGCGGAATTTTATATGTTCCA
AGAAATAGAATGTGATCAACTGAACAAGATCTTCGATGTAAGCCATTCCA
TATTCACAAATCAACGCCGCAGAACAACTAAGACACCAGCCAAACAGCTA
TACATCCTAAACCGTGCCACGCTCGACTCGGGAAGCTCACCCTTCCATCT
CATCGTCCGTCTAGCTCAATGGTGGCGACCGAAAAACAGCATTGAAAATG
CGCGCAGCAACATCGCATCCCACTACGACACCTCCAACGGACTATTCACC
AACTTCCTGTCTCCGGACTTGAATTACTCCTGCGCACATTTCACTAGGGA
CGTGACAGAGCCCCTTCAGACAGCCCAACGACGAAAAGTCCACTACATGA
TCAAGAAAGCGCGCCTTCAATCAACTCACCACTTACTGGATATCGGTTGT
GGCTGGGGAGATTTGATCATCGAAGCAGCGCGACTGACCGGCTGCACAGC
GACGGGAATAACTCTGTCTGAGGAACAGAAGAGTCTTGCGGACGAACGCA
TCCGCGATGCTGGTCTGCAGGACCGCATTCGGGTTTTGCTGTGCGATTAT
CGCAACGCGCCCCGACCTGAAAGTGGATTTTACGATCGCGTCATCTCGAT
CGGGATGTTCGAGCATGTCGGGGCTGAGTATATGGATCAGTACTTTGAGG
TGATTTCGCAATTATTGCCGCCTCGGGATGGTGTGTTGGTTATTGATGGG
ATAACAAAGATACAACCGGTATTATACTCTCCCACTTGAAGCTTGCATGA
AGAATGAAATATCTGAGGTTTGGCAGTTCCACGAAACAAACCCCCGGATG
GGCGACTACATCGACCGCTACGTCTTCCCGGGCGGATACCTTCCCACCCC
GAATATTCTCTTCGAGTCTCTGCACCATGGCAGTAAAGGATCACTAGAAG
TGTCTTCCGTGCTCAATTCAGGCCCTCATTACGGGAAGACCTTACTCGGA
TGGAGGGACAATTTTCTTGCGAATTGGGAAGATATCCGATCGGACTTTTG
CGGTCGGCATCCTGAGGCTTCCACGAAGGAAGTTGAGGCTTATCGACGGC
GTTGGCTGGTGAGGTTCTCCGATCCCTTATTTGAGATTTCCACAGGGTGC
TAA
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Coding sequence (CDS) from alignment at An03:395419..396821-

>CBS51388_002558-T1 ID=CBS51388_002558-T1|Name=CBS51388_002558-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3861bp|location=Sequence derived from alignment at An03:395419..396821- (Aspergillus niger CBS 513.88)
CTTGCATGAAGAATGAAATATCTGAGGTTTGGCAGTTCCACGAAACAAAC
CCCCGGATGGGCGACTACATCGACCGCTACGTCTTCCCGGGCGGATACCT
TCCCACCCCGAATATTCTCTTCGAGTCTCTGCACCATGGCAGTAAAGGAT
CACTAGAAGTGTCTTCCGTGCTCAATTCAGGCCCTCATTACGGGAAGACC
TTACTCGGATGGAGGGACAATTTTCTTGCGAATTGGGAAGATATCCGATC
GGACTTTTGCGGTCGGCATCCTGAGGCTTCCACGAAGGAAGTTGAGGCTT
ATCGACGGCGTTGGCTGGTGAGGTTCTCCGATCCCTTATTTGAGATTTCC
ACAGGGTGCTAAGGGTTTGCGGAATTTTATATGTTCCAAGAAATAGAATG
TGATCAACTGAACAAGATCTTCGATGTAAGCCATTCCATATTCACAAATC
AACGCCGCAGAACAACTAAGACACCAGCCAAACAGCTATACATCCTAAAC
CGTGCCACGCTCGACTCGGGAAGCTCACCCTTCCATCTCATCGTCCGTCT
AGCTCAATGGTGGCGACCGAAAAACAGCATTGAAAATGCGCGCAGCAACA
TCGCATCCCACTACGACACCTCCAACGGACTATTCACCAACTTCCTGTCT
CCGGACTTGAATTACTCCTGCGCACATTTCACTAGGGACGTGACAGAGCC
CCTTCAGACAGCCCAACGACGAAAAGTCCACTACATGATCAAGAAAGCGC
GCCTTCAATCAACTCACCACTTACTGGATATCGGTTGTGGCTGGGGAGAT
TTGATCATCGAAGCAGCGCGACTGACCGGCTGCACAGCGACGGGAATAAC
TCTGTCTGAGGAACAGAAGAGTCTTGCGGACGAACGCATCCGCGATGCTG
GTCTGCAGGACCGCATTCGGGTTTTGCTGTGCGATTATCGCAACGCGCCC
CGACCTGAAAGTGGATTTTACGATCGCGTCATCTCGATCGGGATGTTCGA
GCATGTCGGGGCTGAGTATATGGATCAGTACTTTGAGGTGATTTCGCAAT
TATTGCCGCCTCGGGATGATGTTGCTAACTACTGTCACCCAGTCATTCCA
GTCTTATGCTCTTCGACTGGTGCAAGACACCCTACGGCGAATTTCAGCCC
CGGTAAAATTGATCGATAATGTTAGCGAAGAGGAGAAAATACTGTACGAT
GACTCGGAAATCGCAGATTCCGAAAAAGCGATTGTCCGCGTCAAAGATGT
GAACTTTTGGAAAAGGGCGTTTCTCGATTTCGATCTGCTTGCATGAAGAA
TGAAATATCTGAGGTTTGGCAGTTCCACGAAACAAACCCCCGGATGGGCG
ACTACATCGACCGCTACGTCTTCCCGGGCGGATACCTTCCCACCCCGAAT
ATTCTCTTCGAGTCTCTGCACCATGGCAGTAAAGGATCACTAGAAGTGTC
TTCCGTGCTCAATTCAGGCCCTCATTACGGGAAGACCTTACTCGGATGGA
GGGACAATTTTCTTGCGAATTGGGAAGATATCCGATCGGACTTTTGCGGT
CGGCATCCTGAGGCTTCCACGAAGGAAGTTGAGGCTTATCGACGGCGTTG
GCTGGTGAGGTTCTCCGATCCCTTATTTGAGATTTCCACAGGGTGCTAAG
GGTTTGCGGAATTTTATATGTTCCAAGAAATAGAATGTGATCAACTGAAC
AAGATCTTCGATGTAAGCCATTCCATATTCACAAATCAACGCCGCAGAAC
AACTAAGACACCAGCCAAACAGCTATACATCCTAAACCGTGCCACGCTCG
ACTCGGGAAGCTCACCCTTCCATCTCATCGTCCGTCTAGCTCAATGGTGG
CGACCGAAAAACAGCATTGAAAATGCGCGCAGCAACATCGCATCCCACTA
CGACACCTCCAACGGACTATTCACCAACTTCCTGTCTCCGGACTTGAATT
ACTCCTGCGCACATTTCACTAGGGACGTGACAGAGCCCCTTCAGACAGCC
CAACGACGAAAAGTCCACTACATGATCAAGAAAGCGCGCCTTCAATCAAC
TCACCACTTACTGGATATCGGTTGTGGCTGGGGAGATTTGATCATCGAAG
CAGCGCGACTGACCGGCTGCACAGCGACGGGAATAACTCTGTCTGAGGAA
CAGAAGAGTCTTGCGGACGAACGCATCCGCGATGCTGGTCTGCAGGACCG
CATTCGGGTTTTGCTGTGCGATTATCGCAACGCGCCCCGACCTGAAAGTG
GATTTTACGATCGCGTCATCTCGATCGGGATGTTCGAGCATGTCGGGGCT
GAGTATATGGATCAGTACTTTGAGGTGATTTCGCAATTATTGCCGCCTCG
GGATGATGTTGCTAACTACTGTCACCCAGTCATTCCAGTCTTATGCTCTT
CGACTGGTGCAAGACACCCTACGGCGAATTTCAGCCCCGGTAAAATTGAT
CGATAATGTTAGCGAAGAGGAGAAAATACTGTACGATGACTCGGAAATCG
CAGATTCCGAAAAAGCGATTGTCCGCGTCAAAGATGTGAACTTTTGGAAA
AGGGCGTTTCTCGATTTCGATCTGCTTGCATGAAGAATGAAATATCTGAG
GTTTGGCAGTTCCACGAAACAAACCCCCGGATGGGCGACTACATCGACCG
CTACGTCTTCCCGGGCGGATACCTTCCCACCCCGAATATTCTCTTCGAGT
CTCTGCACCATGGCAGTAAAGGATCACTAGAAGTGTCTTCCGTGCTCAAT
TCAGGCCCTCATTACGGGAAGACCTTACTCGGATGGAGGGACAATTTTCT
TGCGAATTGGGAAGATATCCGATCGGACTTTTGCGGTCGGCATCCTGAGG
CTTCCACGAAGGAAGTTGAGGCTTATCGACGGCGTTGGCTGGTGAGGTTC
TCCGATCCCTTATTTGAGATTTCCACAGGGTGCTAAGGGTTTGCGGAATT
TTATATGTTCCAAGAAATAGAATGTGATCAACTGAACAAGATCTTCGATG
TAAGCCATTCCATATTCACAAATCAACGCCGCAGAACAACTAAGACACCA
GCCAAACAGCTATACATCCTAAACCGTGCCACGCTCGACTCGGGAAGCTC
ACCCTTCCATCTCATCGTCCGTCTAGCTCAATGGTGGCGACCGAAAAACA
GCATTGAAAATGCGCGCAGCAACATCGCATCCCACTACGACACCTCCAAC
GGACTATTCACCAACTTCCTGTCTCCGGACTTGAATTACTCCTGCGCACA
TTTCACTAGGGACGTGACAGAGCCCCTTCAGACAGCCCAACGACGAAAAG
TCCACTACATGATCAAGAAAGCGCGCCTTCAATCAACTCACCACTTACTG
GATATCGGTTGTGGCTGGGGAGATTTGATCATCGAAGCAGCGCGACTGAC
CGGCTGCACAGCGACGGGAATAACTCTGTCTGAGGAACAGAAGAGTCTTG
CGGACGAACGCATCCGCGATGCTGGTCTGCAGGACCGCATTCGGGTTTTG
CTGTGCGATTATCGCAACGCGCCCCGACCTGAAAGTGGATTTTACGATCG
CGTCATCTCGATCGGGATGTTCGAGCATGTCGGGGCTGAGTATATGGATC
AGTACTTTGAGGTGATTTCGCAATTATTGCCGCCTCGGGATGATGTTGCT
AACTACTGTCACCCAGTCATTCCAGTCTTATGCTCTTCGACTGGTGCAAG
ACACCCTACGGCGAATTTCAGCCCCGGTAAAATTGATCGATAATGTTAGC
GAAGAGGAGAAAATACTGTACGATGACTCGGAAATCGCAGATTCCGAAAA
AGCGATTGTCCGCGTCAAAGATGTGAACTTTTGGAAAAGGGCGTTTCTCG
ATTTCGATCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008610lipid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002558CBS51388_002558Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002558-T1CBS51388_002558-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002558-T1.cdsCBS51388_002558-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002558-T1.exon3CBS51388_002558-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002558-T1.exon2CBS51388_002558-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002558-T1.exon1CBS51388_002558-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR003333
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08241
DBxrefPFAM:PF02353
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:395419..396821 -
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