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CBS51388_002561-T1, CBS51388_002561-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002561-T1
Unique NameCBS51388_002561-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:403078..404428+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002561-T1 ID=CBS51388_002561-T1|Name=CBS51388_002561-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1351bp|location=Sequence derived from alignment at An03:403078..404428+ (Aspergillus niger CBS 513.88)
ATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACT
CTTGGTAAATAAATTACCTATGTATGTAATATTAGTTTCTTGTTTGTTTC
TGACAATGACAGTGGAGCACCAACATCTCCTACTGGCTTAACCACTCCCT
CCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAG
ACATTGTCTTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAA
ACCTGGTATAGATATGTTGGATCGACGTCGAATTACCCACGGCGACCGAA
CCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGAT
TCGTGCAGAGCCAGATGTGGTAGGTATCGTTATTCATATTGCGCCATCTT
GCTAAATGAATGCATGTAGCTAACAATACAGGACAATGTCTATCATTCAC
ACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAATCTGTATGATGA
CGGCGGTTCAGCACGTTAGTACCGTTCCGCATGTTGAATCGGGATGCAAG
TCACGCCTCTGACCCTATTTAAATAGAGAACACCGACGGTGCAAATACTA
TCTACAGCAAAAACATCACATTAACGAACTGGGAAGTCGTCAACGGTGAT
GATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTG
CACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATA
ATGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCACATAT
GAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGT
CGGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATGTACGTCCGCGT
AAATTTATCCAAGTCCTTTGTTGATTTTAACCATCCTACCATGGCAGATG
CATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTCAAAGGTGCT
CCATTTACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAACTG
CACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCACCGATATCTCTG
GAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCC
CCGTGTGAAGATATCACTATCGAGAATGTAAGTTTGCGAATAGCGGGGAA
TACGACCCATGCAGAAGAGTATCTGTGTGGGAATGTGGATGGGACCGTTG
GGTTCAATTGCACTGGAGATGTGTGTGTTGGGTCAAGTGCTACTGGGGGA
TGTTAGCCTAGCAAACAGGTTCTCGTTGAGGCGCTTCAAGATTTCCAGTA
G
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Coding sequence (CDS) from alignment at An03:403078..404428+

>CBS51388_002561-T1 ID=CBS51388_002561-T1|Name=CBS51388_002561-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5886bp|location=Sequence derived from alignment at An03:403078..404428+ (Aspergillus niger CBS 513.88)
ATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACT
CTTGTGGAGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCCCGTCG
GCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTC
TTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTA
TAGATATGTTGGATCGACGTCGAATTACCCACGGCGACCGAACCAGCTGA
CGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAG
AGCCAGATGTGGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGA
TTCCATCTACGTGAACAATCTGTATGATGACGGCGGTTCAGCACAGAACA
CCGACGGTGCAAATACTATCTACAGCAAAAACATCACATTAACGAACTGG
GAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGA
TATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCG
GGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAA
ATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGAC
CTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTT
TGGGATATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTC
AAAGGTGCTCCATTTACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTC
AGGGAACTGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCACCG
ATATCTCTGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGT
GCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATCCTAGCAAACAGGT
TCTCGTTGAGGCGCTTCAAGATTTCCAGTAGATGAACACGACATGGCTCG
ATGATGTGGAGATTGATCTACAGGGTACACTCTTGTGGAGCACCAACATC
TCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCAC
TGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATGGATACG
GAACATTCAATGGAAGTGGCCAAACCTGGTATAGATATGTTGGATCGACG
TCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGG
CGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGACAATGT
CTATCATTCACACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAAT
CTGTATGATGACGGCGGTTCAGCACAGAACACCGACGGTGCAAATACTAT
CTACAGCAAAAACATCACATTAACGAACTGGGAAGTCGTCAACGGTGATG
ATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGC
ACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAA
TGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCACATATG
AGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTC
GGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATCCGACAT
CGTCGCAACCAACTTGAAGACCAACAACCTCAAAGGTGCTCCATTTACAA
TCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCC
AAATTTCAGATTCGCGATCTTGTCTTCACCGATATCTCTGGAACGACAGA
CTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAG
ATATCACTATCGAGAATCCTAGCAAACAGGTTCTCGTTGAGGCGCTTCAA
GATTTCCAGTAGATGAACACGACATGGCTCGATGATGTGGAGATTGATCT
ACAGGGTACACTCTTGTGGAGCACCAACATCTCCTACTGGCTTAACCACT
CCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGC
AAAGACATTGTCTTTGAAGGACATGGATACGGAACATTCAATGGAAGTGG
CCAAACCTGGTATAGATATGTTGGATCGACGTCGAATTACCCACGGCGAC
CGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTG
CGATTCGTGCAGAGCCAGATGTGGACAATGTCTATCATTCACACCTCGAA
CTCGTGGTTCGATTCCATCTACGTGAACAATCTGTATGATGACGGCGGTT
CAGCACAGAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACA
TTAACGAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGC
CAATTCTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAG
GCATTGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTT
GAACGCCTTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGT
GTACTTCAAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAG
GCGGCGGGGGTTTGGGATATGCATCCGACATCGTCGCAACCAACTTGAAG
ACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGTACGACGTT
CTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTCGCGATC
TTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCAGATGTTGCGAGC
TTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATCC
TAGCAAACAGGTTCTCGTTGAGGCGCTTCAAGATTTCCAGTAGATGAACA
CGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGTGG
AGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCA
GAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAG
GACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAGATAT
GTTGGATCGACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTC
GGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGA
TGTGGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTCCATC
TACGTGAACAATCTGTATGATGACGGCGGTTCAGCACAGAACACCGACGG
TGCAAATACTATCTACAGCAAAAACATCACATTAACGAACTGGGAAGTCG
TCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACG
ATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTAT
TGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAA
ACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACG
GGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATA
TGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTCAAAGGTG
CTCCATTTACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAAC
TGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCACCGATATCTC
TGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTG
CCCCGTGTGAAGATATCACTATCGAGAATCCTAGCAAACAGGTTCTCGTT
GAGGCGCTTCAAGATTTCCAGTAGATGAACACGACATGGCTCGATGATGT
GGAGATTGATCTACAGGGTACACTCTTGTGGAGCACCAACATCTCCTACT
GGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTGG
ATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATGGATACGGAACATT
CAATGGAAGTGGCCAAACCTGGTATAGATATGTTGGATCGACGTCGAATT
ACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTC
TTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGACAATGTCTATCAT
TCACACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAATCTGTATG
ATGACGGCGGTTCAGCACAGAACACCGACGGTGCAAATACTATCTACAGC
AAAAACATCACATTAACGAACTGGGAAGTCGTCAACGGTGATGATAGTAT
CAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGCACCTTCA
CTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGTGCT
TTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCACATATGAGAAGAC
AACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGATACC
CGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATCCGACATCGTCGCA
ACCAACTTGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCA
GTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTC
AGATTCGCGATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCA
GATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCAC
TATCGAGAATCCTAGCAAACAGGTTCTCGTTGAGGCGCTTCAAGATTTCC
AGTAGATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGT
ACACTCTTGTGGAGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCC
CGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACA
TTGTCTTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACC
TGGTATAGATATGTTGGATCGACGTCGAATTACCCACGGCGACCGAACCA
GCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCG
TGCAGAGCCAGATGTGGACAATGTCTATCATTCACACCTCGAACTCGTGG
TTCGATTCCATCTACGTGAACAATCTGTATGATGACGGCGGTTCAGCACA
GAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACATTAACGA
ACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCT
ACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGC
CATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCC
TTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTACTTC
AAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGG
GGGTTTGGGATATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACA
ACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGTACGACGTTCTCTGGT
GCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTT
CACCGATATCTCTGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGT
GTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATCCTAGCAAA
CAGGTTCTCGTTGAGGCGCTTCAAGATTTCCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002561CBS51388_002561Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002561-T1CBS51388_002561-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002561-T1.exon1CBS51388_002561-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002561-T1.exon2CBS51388_002561-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002561-T1.exon3CBS51388_002561-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002561-T1.exon4CBS51388_002561-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_002561-T1.exon5CBS51388_002561-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_002561-T1.exon6CBS51388_002561-T1.exon6Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002561-T1.cdsCBS51388_002561-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:403078..404428 +
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