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CBS51388_002605-T1, CBS51388_002605-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002605-T1
Unique NameCBS51388_002605-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:509013..512043-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002605-T1 ID=CBS51388_002605-T1|Name=CBS51388_002605-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3031bp|location=Sequence derived from alignment at An03:509013..512043- (Aspergillus niger CBS 513.88)
ATGAATGAGGAAGGGGCCAGCAATTATGAAATGTCACACTCCCGCAGTCA
ACCCTCACAACAAGAGTCAAATCTGGATGAGAAATACCCAAACCGTCCTC
ATAATCACTCCCAGACATTGCCCTTTCACGAGCTCTTTGAGACCCTCTTC
AATCCGTTGAGTGAGCTCTCCAAGAAGCCTGCAGGCACCGCCGCTCCTCG
GCGAAAAGTCGGGCCTCATGGCCAGTCGGCGGCGAACCTTACCCCACACG
AAAAGCGACGGGATGTCATTGAGCGGTTCATCTCACGATGGCGGAAAGAG
GTGGGGGATGATATCTACCCTGCGTTTCGGCTGATTCTTCCGGACAAAGA
TCGCGACCGGGCCATGTACGGTATCAAAGAAAAGGCCATCGGAAAGCTAC
TCGTCAAAATTATGAAGATCGACAAGAATTCGGATGACGGCTTCAATCTT
TTGAACTGGAAGCTGCCAGGCCAGTTGGCTACCTCGCGCTTTATGGCGGG
GGATTTTGCGAGACGCTGCTACGATGTTATCTCAAAACGGCCAATGAGGA
CAGAGGTGGGAAATATGTCCATTGAGGAGGTGAATGACAGGCTCGACCAG
CTTTCAAATGCCTCGAAGGAGGAGCAGCAGCTACCCATCTTGTCGGAGTT
TTACCGAAAAATGAACCCCGAGGAGCTGCTGTGGCTGATCCGCATTATCC
TTCGACAGATGAAAGTCGGGGCTACAGAGCGAACCTTATTCAATGTATGG
CACCCAGATGCTGCAAACCTCTATAGCATATCCAGTAGCCTTCAACGTGT
TTGTTGGGAGCTGCATGATCCGAACATTCGGCTTGGGGCTGAAAACAGCG
GCATTTCTCTGATGCAATGCTTCCAGCCCCAGCTAGCTCAGTTTCAGATG
CAGTCCCTTGATCGAATGATTGCCTCGAATGCGGGGTACCGAAGAAGACC
CGGTATTCTGGATCGAGGAGAAGCTCGACGGGGAACGTATGCAGCTTCAT
ATGGAGACTGACAGCTCGGTGCCGGGAGGAAAGAAGTTTCGCTTCTGGTC
GAGGAAAGCGAAGGATTACACCTATCTCTATGGAAAGAGCCTTGAGGACC
CCAATGGTGCCTTGGCCCGACATCTCAAAGACGCCTTTGCAGATGGGGTC
AACAGTTTGATCCTGGACGGGGAAATGATTGCTTGGAATCCCGAGCAGGG
CGCCCCCGAACCATTTGGCACCTTAAAAACTGCCGCATTAGCTGAACAGA
GAAATCCGTTCTCAAACGGATCGCGGCCGCTTTTTCGTGTGTTTGATCTA
CTCTTGCTGAATGGGCACAATTTGACCAGGTACACTCTTCGCGATCGTCG
AAATGCCCTGCAGAAGAGTGTAAAGTCAGTTCACCGTCGGTTCGAAATCC
ATCCTTACGAGGAGGCTACAGACAAGGCCCAGATCGAAGCAGCGCTTCGA
AAAGTTGTTGCGGAGGCTTCTGAGGGACTAGTAGTCAAAAATCCAAGGTC
ACCATATCGCCTCAATGAACGACATGACGACTGGATGAAAGTGAAGCCTG
AGTACATGACAGAGTTTGGGGAGTCCCTGGATCTGATTGTCATAGGCGGC
TATTACGGCAGTGGTCATCGAGGAGGGGGTCTTTCAAGCTTCCTATGTGG
ATTAAGGGCCGATAATGCCAGCTCTTCGCAAGGGATAGGGGCAACCAAAT
GCTATTCTTTCTGCAAGGTCGGAGGAGGCTTTACAGCAGCAGACTATGCG
AATATCCGTCATCATACTGATGGGAAATGGGTGGACTGGAACCCGAGGAA
ACCACCAACGGCATACATTGAGCTGGCAGGTGGCAGTGCCCAGCACGAGC
GTCCAGATCAGTGGATCAAGCCAGAGGACTCGGTGGTACTCTGTGTTAAA
GCAGCATCGGTATCAGTCAGTGATCAATTTCGTGTCGGTTTAACATTGCG
CTTCCCGCGGTTCAAGAGGTTACGCATGGATAAAGACTGGAAGAGTGCGC
TTTCCATGCAAGAATTCCTGGATCTGAAGTCGAACGTGGAGAAAGAGCAA
AAGGAGAAGGAATTCAATGTAGAGAATTTCCGCAAGAAACGAGTGAAGCG
ACCAAAGAAGGCCTTGACAGTTGCAGGATACAGCCCGAATGCAGAGGTGA
AGTATGAAGGTCCGTCAGGGCATATTTTCGACGGGCTCAACTTCTTTATT
TTGACCGACTCGGTGGCCCCGAATAAGAAAACAAAGGCGGAGTTGGAACA
ACTTGTCAAATTGAATGGAGGCAAGATATATCAGACAAATAAGGCCGCTC
CCAACACCGTATGTATCGCGGATCGAAGAACTGTGAAAGCAGCCTCCTTG
CAAAAGAGTGGCGATGTGAGCCTAATCCGACCATCTTGGATCCTAGACTG
TGTGAGGCAGAACGAGATTGATGCGGGACTGCCAGACCTGCTTCTTCCCC
TGGAACCTAGGCACATGTTCTTCACAACGCCTAGCAAGGAGGAGGAGGTA
TTGACGAGTGTTGACCGGTTCAATGATAGCTACGCTCGGGATGTCACCAA
GGAAGAGCTGGTCAGCTTACTCGAAAAGATGAGCGCTGACAATGGTAGTT
CCGACGTGCCCCCGAGAGGCGAAGCCACCAAGAAGCTTAGGGAAGCTATT
CAAGAAAAAGTGGACTCAGGATGGGATCTCCCATGCGGGTGGCTTTTTCA
GAACTTGACGTTCTTCTTTCCCGACCGGACAACGCAGGATCCAGATCCCG
GAGAGCCCGAATATGCCGGCTGCGGCTATCGACTTTCTTTGGCTCGCAAT
ACGGCCAAATTTGCAGGTGCTACCGTTGTCAATACTTATGAGGACCCTTC
CATCACCCATGTGGTTGTAGATCCGGATACACCATCTTCGGAGATCGCCA
CGCTAAGGAAAACCTTGTCTCTCCGAGTGGACCAGAAACTTCCTCACATA
GTTACCACTGAATGGATTGAGGAGAGCTGGGAGCAGCAATCATTTCTTGA
TGAAGATAGATATCATCCAAGGCCAGCTTGA
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Coding sequence (CDS) from alignment at An03:509013..512043-

>CBS51388_002605-T1 ID=CBS51388_002605-T1|Name=CBS51388_002605-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6006bp|location=Sequence derived from alignment at An03:509013..512043- (Aspergillus niger CBS 513.88)
CTCGGTGCCGGGAGGAAAGAAGTTTCGCTTCTGGTCGAGGAAAGCGAAGG
ATTACACCTATCTCTATGGAAAGAGCCTTGAGGACCCCAATGGTGCCTTG
GCCCGACATCTCAAAGACGCCTTTGCAGATGGGGTCAACAGTTTGATCCT
GGACGGGGAAATGATTGCTTGGAATCCCGAGCAGGGCGCCCCCGAACCAT
TTGGCACCTTAAAAACTGCCGCATTAGCTGAACAGAGAAATCCGTTCTCA
AACGGATCGCGGCCGCTTTTTCGTGTGTTTGATCTACTCTTGCTGAATGG
GCACAATTTGACCAGGTACACTCTTCGCGATCGTCGAAATGCCCTGCAGA
AGAGTGTAAAGTCAGTTCACCGTCGGTTCGAAATCCATCCTTACGAGGAG
GCTACAGACAAGGCCCAGATCGAAGCAGCGCTTCGAAAAGTTGTTGCGGA
GGCTTCTGAGGGACTAGTAGTCAAAAATCCAAGGTCACCATATCGCCTCA
ATGAACGACATGACGACTGGATGAAAGTGAAGCCTGAGTACATGACAGAG
TTTGGGGAGTCCCTGGATCTGATTGTCATAGGCGGCTATTACGGCAGTGG
TCATCGAGGAGGGGGTCTTTCAAGCTTCCTATGTGGATTAAGGGCCGATA
ATGCCAGCTCTTCGCAAGGGATAGGGGCAACCAAATGCTATTCTTTCTGC
AAGGTCGGAGGAGGCTTTACAGCAGCAGACTATGCGAATATCCGTCATCA
TACTGATGGGAAATGGGTGGACTGGAACCCGAGGAAACCACCAACGGCAT
ACATTGAGCTGGCAGGTGGCAGTGCCCAGCACGAGCGTCCAGATCAGTGG
ATCAAGCCAGAGGACTCGGTGGTACTCTGTGTTAAAGCAGCATCGGTATC
AGTCAGTGATCAATTTCGTGTCGGTTTAACATTGCGCTTCCCGCGGTTCA
AGAGGTTACGCATGGATAAAGACTGGAAGAGTGCGCTTTCCATGCAAGAA
TTCCTGGATCTGAAGTCGAACGTGGAGAAAGAGCAAAAGGAGAAGGAATT
CAATGTAGAGAATTTCCGCAAGAAACGAGTGAAGCGACCAAAGAAGGCCT
TGACAGTTGCAGGATACAGCCCGAATGCAGAGGTGAAGTATGAAGGTCCG
TCAGGGCATATTTTCGACGGGCTCAACTTCTTTATTTTGACCGACTCGGT
GGCCCCGAATAAGAAAACAAAGGCGGAGTTGGAACAACTTGTCAAATTGA
ATGGAGGCAAGATATATCAGACAAATAAGGCCGCTCCCAACACCGTATGT
ATCGCGGATCGAAGAACTGTGAAAGCAGCCTCCTTGCAAAAGAGTGGCGA
TGTGAGCCTAATCCGACCATCTTGGATCCTAGACTGTGTGAGGCAGAACG
AGATTGATGCGGGACTGCCAGACCTGCTTCTTCCCCTGGAACCTAGGCAC
ATGTTCTTCACAACGCCTAGCAAGGAGGAGGAGGTATTGACGAGTGTTGA
CCGGTTCAATGATAGCTACGCTCGGGATGTCACCAAGGAAGAGCTGGTCA
GCTTACTCGAAAAGATGAGCGCTGACAATGGTAGTTCCGACGTGCCCCCG
AGAGGCGAAGCCACCAAGAAGCTTAGGGAAGCTATTCAAGAAAAAGTGGA
CTCAGGATGGGATCTCCCATGCGGGTGGCTTTTTCAGAACTTGACGTTCT
TCTTTCCCGACCGGACAACGCAGGATCCAGATCCCGGAGAGCCCGAATAT
GCCGGCTGCGGCTATCGACTTTCTTTGGCTCGCAATACGGCCAAATTTGC
AGGTGCTACCGTTGTCAATACTTATGAGGACCCTTCCATCACCCATGTGG
TTGTAGATCCGGATACACCATCTTCGGAGATCGCCACGCTAAGGAAAACC
TTGTCTCTCCGAGTGGACCAGAAACTTCCTCACATAGTTACCACTGAATG
GATTGAGGAGAGCTGGGAGCAGCAATCATTTCTTGATGAAGATAGATATC
ATCCAAGGCCAGCTTGAATGAATGAGGAAGGGGCCAGCAATTATGAAATG
TCACACTCCCGCAGTCAACCCTCACAACAAGAGTCAAATCTGGATGAGAA
ATACCCAAACCGTCCTCATAATCACTCCCAGACATTGCCCTTTCACGAGC
TCTTTGAGACCCTCTTCAATCCGTTGAGTGAGCTCTCCAAGAAGCCTGCA
GGCACCGCCGCTCCTCGGCGAAAAGTCGGGCCTCATGGCCAGTCGGCGGC
GAACCTTACCCCACACGAAAAGCGACGGGATGTCATTGAGCGGTTCATCT
CACGATGGCGGAAAGAGGTGGGGGATGATATCTACCCTGCGTTTCGGCTG
ATTCTTCCGGACAAAGATCGCGACCGGGCCATGTACGGTATCAAAGAAAA
GGCCATCGGAAAGCTACTCGTCAAAATTATGAAGATCGACAAGAATTCGG
ATGACGGCTTCAATCTTTTGAACTGGAAGCTGCCAGGCCAGTTGGCTACC
TCGCGCTTTATGGCGGGGGATTTTGCGAGACGCTGCTACGATGTTATCTC
AAAACGGCCAATGAGGACAGAGGTGGGAAATATGTCCATTGAGGAGGTGA
ATGACAGGCTCGACCAGCTTTCAAATGCCTCGAAGGAGGAGCAGCAGCTA
CCCATCTTGTCGGAGTTTTACCGAAAAATGAACCCCGAGGAGCTGCTGTG
GCTGATCCGCATTATCCTTCGACAGATGAAAGTCGGGGCTACAGAGCGAA
CCTTATTCAATGTATGGCACCCAGATGCTGCAAACCTCTATAGCATATCC
AGTAGCCTTCAACGTGTTTGTTGGGAGCTGCATGATCCGAACATTCGGCT
TGGGGCTGAAAACAGCGGCATTTCTCTGATGCAATGCTTCCAGCCCCAGC
TAGCTCAGTTTCAGATGCAGTCCCTTGATCGAATGATTGCCTCGAATGCG
GGGTACCGAAGAAGACCCGGTATTCTGGATCGAGGAGAAGCTCGACGGGG
AACCTCGGTGCCGGGAGGAAAGAAGTTTCGCTTCTGGTCGAGGAAAGCGA
AGGATTACACCTATCTCTATGGAAAGAGCCTTGAGGACCCCAATGGTGCC
TTGGCCCGACATCTCAAAGACGCCTTTGCAGATGGGGTCAACAGTTTGAT
CCTGGACGGGGAAATGATTGCTTGGAATCCCGAGCAGGGCGCCCCCGAAC
CATTTGGCACCTTAAAAACTGCCGCATTAGCTGAACAGAGAAATCCGTTC
TCAAACGGATCGCGGCCGCTTTTTCGTGTGTTTGATCTACTCTTGCTGAA
TGGGCACAATTTGACCAGGTACACTCTTCGCGATCGTCGAAATGCCCTGC
AGAAGAGTGTAAAGTCAGTTCACCGTCGGTTCGAAATCCATCCTTACGAG
GAGGCTACAGACAAGGCCCAGATCGAAGCAGCGCTTCGAAAAGTTGTTGC
GGAGGCTTCTGAGGGACTAGTAGTCAAAAATCCAAGGTCACCATATCGCC
TCAATGAACGACATGACGACTGGATGAAAGTGAAGCCTGAGTACATGACA
GAGTTTGGGGAGTCCCTGGATCTGATTGTCATAGGCGGCTATTACGGCAG
TGGTCATCGAGGAGGGGGTCTTTCAAGCTTCCTATGTGGATTAAGGGCCG
ATAATGCCAGCTCTTCGCAAGGGATAGGGGCAACCAAATGCTATTCTTTC
TGCAAGGTCGGAGGAGGCTTTACAGCAGCAGACTATGCGAATATCCGTCA
TCATACTGATGGGAAATGGGTGGACTGGAACCCGAGGAAACCACCAACGG
CATACATTGAGCTGGCAGGTGGCAGTGCCCAGCACGAGCGTCCAGATCAG
TGGATCAAGCCAGAGGACTCGGTGGTACTCTGTGTTAAAGCAGCATCGGT
ATCAGTCAGTGATCAATTTCGTGTCGGTTTAACATTGCGCTTCCCGCGGT
TCAAGAGGTTACGCATGGATAAAGACTGGAAGAGTGCGCTTTCCATGCAA
GAATTCCTGGATCTGAAGTCGAACGTGGAGAAAGAGCAAAAGGAGAAGGA
ATTCAATGTAGAGAATTTCCGCAAGAAACGAGTGAAGCGACCAAAGAAGG
CCTTGACAGTTGCAGGATACAGCCCGAATGCAGAGGTGAAGTATGAAGGT
CCGTCAGGGCATATTTTCGACGGGCTCAACTTCTTTATTTTGACCGACTC
GGTGGCCCCGAATAAGAAAACAAAGGCGGAGTTGGAACAACTTGTCAAAT
TGAATGGAGGCAAGATATATCAGACAAATAAGGCCGCTCCCAACACCGTA
TGTATCGCGGATCGAAGAACTGTGAAAGCAGCCTCCTTGCAAAAGAGTGG
CGATGTGAGCCTAATCCGACCATCTTGGATCCTAGACTGTGTGAGGCAGA
ACGAGATTGATGCGGGACTGCCAGACCTGCTTCTTCCCCTGGAACCTAGG
CACATGTTCTTCACAACGCCTAGCAAGGAGGAGGAGGTATTGACGAGTGT
TGACCGGTTCAATGATAGCTACGCTCGGGATGTCACCAAGGAAGAGCTGG
TCAGCTTACTCGAAAAGATGAGCGCTGACAATGGTAGTTCCGACGTGCCC
CCGAGAGGCGAAGCCACCAAGAAGCTTAGGGAAGCTATTCAAGAAAAAGT
GGACTCAGGATGGGATCTCCCATGCGGGTGGCTTTTTCAGAACTTGACGT
TCTTCTTTCCCGACCGGACAACGCAGGATCCAGATCCCGGAGAGCCCGAA
TATGCCGGCTGCGGCTATCGACTTTCTTTGGCTCGCAATACGGCCAAATT
TGCAGGTGCTACCGTTGTCAATACTTATGAGGACCCTTCCATCACCCATG
TGGTTGTAGATCCGGATACACCATCTTCGGAGATCGCCACGCTAAGGAAA
ACCTTGTCTCTCCGAGTGGACCAGAAACTTCCTCACATAGTTACCACTGA
ATGGATTGAGGAGAGCTGGGAGCAGCAATCATTTCTTGATGAAGATAGAT
ATCATCCAAGGCCAGCTTGAATGAATGAGGAAGGGGCCAGCAATTATGAA
ATGTCACACTCCCGCAGTCAACCCTCACAACAAGAGTCAAATCTGGATGA
GAAATACCCAAACCGTCCTCATAATCACTCCCAGACATTGCCCTTTCACG
AGCTCTTTGAGACCCTCTTCAATCCGTTGAGTGAGCTCTCCAAGAAGCCT
GCAGGCACCGCCGCTCCTCGGCGAAAAGTCGGGCCTCATGGCCAGTCGGC
GGCGAACCTTACCCCACACGAAAAGCGACGGGATGTCATTGAGCGGTTCA
TCTCACGATGGCGGAAAGAGGTGGGGGATGATATCTACCCTGCGTTTCGG
CTGATTCTTCCGGACAAAGATCGCGACCGGGCCATGTACGGTATCAAAGA
AAAGGCCATCGGAAAGCTACTCGTCAAAATTATGAAGATCGACAAGAATT
CGGATGACGGCTTCAATCTTTTGAACTGGAAGCTGCCAGGCCAGTTGGCT
ACCTCGCGCTTTATGGCGGGGGATTTTGCGAGACGCTGCTACGATGTTAT
CTCAAAACGGCCAATGAGGACAGAGGTGGGAAATATGTCCATTGAGGAGG
TGAATGACAGGCTCGACCAGCTTTCAAATGCCTCGAAGGAGGAGCAGCAG
CTACCCATCTTGTCGGAGTTTTACCGAAAAATGAACCCCGAGGAGCTGCT
GTGGCTGATCCGCATTATCCTTCGACAGATGAAAGTCGGGGCTACAGAGC
GAACCTTATTCAATGTATGGCACCCAGATGCTGCAAACCTCTATAGCATA
TCCAGTAGCCTTCAACGTGTTTGTTGGGAGCTGCATGATCCGAACATTCG
GCTTGGGGCTGAAAACAGCGGCATTTCTCTGATGCAATGCTTCCAGCCCC
AGCTAGCTCAGTTTCAGATGCAGTCCCTTGATCGAATGATTGCCTCGAAT
GCGGGGTACCGAAGAAGACCCGGTATTCTGGATCGAGGAGAAGCTCGACG
GGGAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0071897DNA biosynthetic process
GO:0006281DNA repair
GO:0006310DNA recombination
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003910DNA ligase (ATP) activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LIG4CBS51388_002605Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002605-T1CBS51388_002605-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002605-T1.cdsCBS51388_002605-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002605-T1.exon2CBS51388_002605-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002605-T1.exon1CBS51388_002605-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR036599
DBxrefInterPro:IPR000977
DBxrefInterPro:IPR012309
DBxrefInterPro:IPR036420
DBxrefInterPro:IPR012310
DBxrefInterPro:IPR012308
DBxrefInterPro:IPR001357
DBxrefPFAM:PF09414
DBxrefPFAM:PF04675
DBxrefPFAM:PF01068
DBxrefPFAM:PF04679
DBxrefPFAM:PF16589
DBxrefPFAM:PF00533
ProductDNA ligase (ATP)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:509013..512043 -
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