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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:512615..514360- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002606-T1 ID=CBS51388_002606-T1|Name=CBS51388_002606-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1746bp|location=Sequence derived from alignment at An03:512615..514360- (Aspergillus niger CBS 513.88)
ATGATTGACATACTCATGTTATTTAAGGTCTGTGATAGCGGGGTACCCAT
CGAATACAGCGGGATAGAAGATTCCGTTTCATGGTGCATCAATCAGTAGA
CGGACCGTCACATCCCGTCCGTCGGCCGGGATGACAGGAAACGGCAGACA
ACTCGGGATGTCCCACCCCGCATACCCTTGCCGATATACGGAGTATTTGC
ATCCGAACCAGTCTATATCCGACACATAAAGAGGTCGTCGGAGTACAAGT
TGACCAAATGCTTCAGAAGCGAATACTATTGTTACATGTTTTCCTCAATT
TTACGATTCTCTTTCCCCAAGTCTGTCAGTAACTATAACCGAAAGAGGAT
GAGTGATACGAGCAACTTTCTGGACCGCCTCGCGGCCCTCGACACCAATA
CAGTATCCGATGCATTAGATGTCCTTAACCTTCGTGGGGCCACATACGGC
CTCCGGCCTCTCTGGAACTGCCCGAAAATCGTCGGCCGCGCTAGCACAGT
GGAAGTAGGCCCGAGGATCGGGACAGCTCCAACGCCTCATCCTTTTGCTC
CTACCATCGACGCAGTCAGCAGTGACGACCGGATCCTCGTCATTGCCGGC
GGTCTGGAGGGTGTCTCCTGCTGGGGCGATATTATTGCAAACGCCGCCAA
GGCCAAGGGAATCCGCGGAACCGTAATCGATGGAGTATGCCGGGATATCG
ACGGTAGCGTCGAGGTCCAGTATCCGCTCTACGGACGTGCTGTGACGATG
ATCAGTGGTCGGAGTCGCATAGTCTCTGTCAGCGCTGGCAAACCCGTGCG
TGTCTGTGGGGGTGTGACAGTCGAGCAGGATGACTATGTTATCGCGGATG
CGTGCGGTACTGTCTTCGTCCCTGCTGCACATATCGCGATCGTCCTCACC
CTGGCAGAGCAGATCCACCACCGCGAAGGCCAGATGGTAGAGGCGGTGCG
CTCTGGGCAGACGGTGTCAGCAGTAATGCGCGACTCACGCTTCGAGCAAC
TCCGGCAAGAGACCGTGTCAGCTGCCGCCGCTGCCAGCCCCTTATCGCAA
GAGAACCCGCGGAAGGCGAGCGCGGAGGATCAGGAACTAGTTGGACTTTT
GAGAGGATTGGACTCGCCAGCGGTCTCGGATGCCTTGGATTCCCTGGGGA
TCGCGGGACAGGCCTGGGGAATCCAGCCATTGTCTTCTTCGGGGTCGAGT
AATCGGCGCGTTACTGTTGGACCGGCATTTACTGTTCGTTATGTCCCCGC
GAGCGACCCGCCTGGCAGTGTGGGGGATTTCCTGGATGATGTGGCGGTTG
GGGATGTAGTTGTTATCGATAACAGTAGCCGCACAGACTGTACCGTCTGG
GGTGATATCATGACTCACTATGCCGCGCTGCGGGGGGTTGCGGGCACGGT
GATCGATGGAGTGTGTCGCGACGTGGATCTGGCCCTAGAGGAGGGATACC
CACTATACACCGCAGGACGATGGATGCGTACCGGGAAAGATCGGGTCCAG
GTTGGCGAGGTCAACGGGCCTGTTGGTATCGGGAAGGTCCGGGTCGAGTC
CCGGGACATCGTTGTCGCTGATTCCAATGGTGTCGTGATCATACCTCGAA
GTCGCGTGCGCGAAGTAGCGGAGCTCGCCCGCACGATCTCCGAGAGTGAA
GCGCAGATCCGCGAGTTGTTGACGAAGAGGGGGGCCACGCTTGCGGAGAC
ACGCCGACAGCTTGGCTATCACACACTGCAGCGGAGAAGGGGATAG back to topCoding sequence (CDS) from alignment at An03:512615..514360- >CBS51388_002606-T1 ID=CBS51388_002606-T1|Name=CBS51388_002606-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3348bp|location=Sequence derived from alignment at An03:512615..514360- (Aspergillus niger CBS 513.88)
ACGGACCGTCACATCCCGTCCGTCGGCCGGGATGACAGGAAACGGCAGAC
AACTCGGGATGTCCCACCCCGCATACCCTTGCCGATATACGGAGTATTTG
CATCCGAACCAGTCTATATCCGACACATAAAGAGGTCGTCGGAGTACAAG
TTGACCAAATGCTTCAGAAGCGAATACTATTGTTACATGTTTTCCTCAAT
TTTACGATTCTCTTTCCCCAAGTCTGTCAGTAACTATAACCGAAAGAGGA
TGAGTGATACGAGCAACTTTCTGGACCGCCTCGCGGCCCTCGACACCAAT
ACAGTATCCGATGCATTAGATGTCCTTAACCTTCGTGGGGCCACATACGG
CCTCCGGCCTCTCTGGAACTGCCCGAAAATCGTCGGCCGCGCTAGCACAG
TGGAAGTAGGCCCGAGGATCGGGACAGCTCCAACGCCTCATCCTTTTGCT
CCTACCATCGACGCAGTCAGCAGTGACGACCGGATCCTCGTCATTGCCGG
CGGTCTGGAGGGTGTCTCCTGCTGGGGCGATATTATTGCAAACGCCGCCA
AGGCCAAGGGAATCCGCGGAACCGTAATCGATGGAGTATGCCGGGATATC
GACGGTAGCGTCGAGGTCCAGTATCCGCTCTACGGACGTGCTGTGACGAT
GATCAGTGGTCGGAGTCGCATAGTCTCTGTCAGCGCTGGCAAACCCGTGC
GTGTCTGTGGGGGTGTGACAGTCGAGCAGGATGACTATGTTATCGCGGAT
GCGTGCGGTACTGTCTTCGTCCCTGCTGCACATATCGCGATCGTCCTCAC
CCTGGCAGAGCAGATCCACCACCGCGAAGGCCAGATGGTAGAGGCGGTGC
GCTCTGGGCAGACGGTGTCAGCAGTAATGCGCGACTCACGCTTCGAGCAA
CTCCGGCAAGAGACCGTGTCAGCTGCCGCCGCTGCCAGCCCCTTATCGCA
AGAGAACCCGCGGAAGGCGAGCGCGGAGGATCAGGAACTAGTTGGACTTT
TGAGAGGATTGGACTCGCCAGCGGTCTCGGATGCCTTGGATTCCCTGGGG
ATCGCGGGACAGGCCTGGGGAATCCAGCCATTGTCTTCTTCGGGGTCGAG
TAATCGGCGCGTTACTGTTGGACCGGCATTTACTGTTCGTTATGTCCCCG
CGAGCGACCCGCCTGGCAGTGTGGGGGATTTCCTGGATGATGTGGCGGTT
GGGGATGTAGTTGTTATCGATAACAGTAGCCGCACAGACTGTACCGTCTG
GGGTGATATCATGACTCACTATGCCGCGCTGCGGGGGGTTGCGGGCACGG
TGATCGATGGAGTGTGTCGCGACGTGGATCTGGCCCTAGAGGAGGGATAC
CCACTATACACCGCAGGACGATGGATGCGTACCGGGAAAGATCGGGTCCA
GGTTGGCGAGGTCAACGGGCCTGTTGGTATCGGGAAGGTCCGGGTCGAGT
CCCGGGACATCGTTGTCGCTGATTCCAATGGTGTCGTGATCATACCTCGA
AGTCGCGTGCGCGAAGTAGCGGAGCTCGCCCGCACGATCTCCGAGAGTGA
AGCGCAGATCCGCGAGTTGTTGACGAAGAGGGGGGCCACGCTTGCGGAGA
CACGCCGACAGCTTGGCTATCACACACTGCAGCGGAGAAGGGGATAGATG
ATTGACATACTCATGTTATTTAAGACGGACCGTCACATCCCGTCCGTCGG
CCGGGATGACAGGAAACGGCAGACAACTCGGGATGTCCCACCCCGCATAC
CCTTGCCGATATACGGAGTATTTGCATCCGAACCAGTCTATATCCGACAC
ATAAAGAGGTCGTCGGAGTACAAGTTGACCAAATGCTTCAGAAGCGAATA
CTATTGTTACATGTTTTCCTCAATTTTACGATTCTCTTTCCCCAAGTCTG
TCAGTAACTATAACCGAAAGAGGATGAGTGATACGAGCAACTTTCTGGAC
CGCCTCGCGGCCCTCGACACCAATACAGTATCCGATGCATTAGATGTCCT
TAACCTTCGTGGGGCCACATACGGCCTCCGGCCTCTCTGGAACTGCCCGA
AAATCGTCGGCCGCGCTAGCACAGTGGAAGTAGGCCCGAGGATCGGGACA
GCTCCAACGCCTCATCCTTTTGCTCCTACCATCGACGCAGTCAGCAGTGA
CGACCGGATCCTCGTCATTGCCGGCGGTCTGGAGGGTGTCTCCTGCTGGG
GCGATATTATTGCAAACGCCGCCAAGGCCAAGGGAATCCGCGGAACCGTA
ATCGATGGAGTATGCCGGGATATCGACGGTAGCGTCGAGGTCCAGTATCC
GCTCTACGGACGTGCTGTGACGATGATCAGTGGTCGGAGTCGCATAGTCT
CTGTCAGCGCTGGCAAACCCGTGCGTGTCTGTGGGGGTGTGACAGTCGAG
CAGGATGACTATGTTATCGCGGATGCGTGCGGTACTGTCTTCGTCCCTGC
TGCACATATCGCGATCGTCCTCACCCTGGCAGAGCAGATCCACCACCGCG
AAGGCCAGATGGTAGAGGCGGTGCGCTCTGGGCAGACGGTGTCAGCAGTA
ATGCGCGACTCACGCTTCGAGCAACTCCGGCAAGAGACCGTGTCAGCTGC
CGCCGCTGCCAGCCCCTTATCGCAAGAGAACCCGCGGAAGGCGAGCGCGG
AGGATCAGGAACTAGTTGGACTTTTGAGAGGATTGGACTCGCCAGCGGTC
TCGGATGCCTTGGATTCCCTGGGGATCGCGGGACAGGCCTGGGGAATCCA
GCCATTGTCTTCTTCGGGGTCGAGTAATCGGCGCGTTACTGTTGGACCGG
CATTTACTGTTCGTTATGTCCCCGCGAGCGACCCGCCTGGCAGTGTGGGG
GATTTCCTGGATGATGTGGCGGTTGGGGATGTAGTTGTTATCGATAACAG
TAGCCGCACAGACTGTACCGTCTGGGGTGATATCATGACTCACTATGCCG
CGCTGCGGGGGGTTGCGGGCACGGTGATCGATGGAGTGTGTCGCGACGTG
GATCTGGCCCTAGAGGAGGGATACCCACTATACACCGCAGGACGATGGAT
GCGTACCGGGAAAGATCGGGTCCAGGTTGGCGAGGTCAACGGGCCTGTTG
GTATCGGGAAGGTCCGGGTCGAGTCCCGGGACATCGTTGTCGCTGATTCC
AATGGTGTCGTGATCATACCTCGAAGTCGCGTGCGCGAAGTAGCGGAGCT
CGCCCGCACGATCTCCGAGAGTGAAGCGCAGATCCGCGAGTTGTTGACGA
AGAGGGGGGCCACGCTTGCGGAGACACGCCGACAGCTTGGCTATCACACA
CTGCAGCGGAGAAGGGGATAGATGATTGACATACTCATGTTATTTAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036704 |
| DBxref | InterPro:IPR005493 |
| DBxref | PFAM:PF03737 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:512615..514360 - |
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