You are here

Home

CBS51388_002611-T1, CBS51388_002611-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002611-T1
Unique NameCBS51388_002611-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:527422..529953-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002611-T1 ID=CBS51388_002611-T1|Name=CBS51388_002611-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2532bp|location=Sequence derived from alignment at An03:527422..529953- (Aspergillus niger CBS 513.88)
ATGTTTTCCGCCGTGCTGCGGCGGGCGACCTCGGTCACTTCACGCTTCAC
CTCCCACATTCCATGGCTAAAGAACCTGCGCATGAATTTTGTGCTCATCC
ACTATGTCTACATTATCGCCACCTCTTTGCTTTCTTCAATCATCATCTAT
CCAGGGGCTAATCTAGACTACACCGATGCCCTCTTCCTATCTGCCGGCGC
CGCCACCCAGAGCGGTCTCAACACCGTCGACCTCAATACCTTGCATACCT
ACCAGCAGATCGTTTTGTACGTGGTCTCCATGCTGACTACTCCCATCTTC
ATCCACACTGTGCTGGTCTTCGTGCGTCTTTACTGGTTTGAAAAGCGATT
TCAGCATGTCGTCAGCGATGCGCGCGCCCTTCGCCATACTCGCTCTCGCC
TCCGTACCATAAGCGAAGATAAGGATGGACAATCCTCTTCCCGGGAAGAG
GCTGGTGTCGCCGGTCGGTCTATCGTCGTCCTGCGCGACACACTAGGTCA
TCCGGGAAGCCGGCAGCAGGCCAAGGAGAAATCTGGCGAGGACTCACCCC
CCGCCTCTCCCACCGCGCGGGATCCACCCGAAAATTTGGGCGAAGATGCG
AGCAATGCCCTTAACCAAAAGTTAGGGATAGGACTAGGGAACAGTCTAGG
AAACCTTCGTGTTCCGGCTCAGCTGAGCCCAGAACATCATATTGCATTCC
TGGAGAATCAACGGAGAAACAAAGGCGCTCTGCGAATCCCTAGCCCTCGG
GAGTATGACAACGGTGGCGCACCACAAGTATTGGAGGAAGAAGAGGAGGA
GGAGTTAAATCGACCCGTTCGCACATCTAGCAATTCTTCGAGTTCCGAGC
GCAGCCCATGCGATATCAGCAAAGAGGATGAGAATGACAAGGACGAGGAC
GACGAGGACGATGACAAAGACGAGGATAGGCCGCGCAGACTCGATGGCCC
CCATATTACGATTAACGAGCCGGATATGATCCGGACAAGGACGCGGAACT
CTACTTTCCCCCGATTAGATACACGTCCCACTTTCCGTGAAACAAAGAAT
GACACTGATGCCTCGCAACTGGGTCGCTTGACGTCGCGGCGACCAACTCT
ACACAATCTTTTCCGCACCCTTACGCAGGAACGTGAACGGTCAACACAGC
CGTATCTCAGCTGGAACGCCACGGTCGGTCGGAACTCCAACTTTGTCGAT
CTGACCGAGGAACAACGTGACGAGCTCGGCGGGATTGAGTATCGGGCATT
GAAGACTCTGGCAGTAGTCCTAATTTCCTACTATGCCTTCTTCCACATTC
TGGGCATTCTGTGCCTCGTGCCCTGGATCATGACCACACATTGGGGCAAA
GTGGTCGAGGAAATCGGACAGGGTCGCCCTTGGTGGGCCATCTTCATGGC
TCAATCAGCTTTTAACGATGTCGGTTTCACTCTCACGCCAGACTCGCTAT
CTTCATTCCAGAGAGCGATATTCCCGCTCCTGCTTATGACGTTTTTGATT
ATTATAGGGAATACGGGATTCCCTTGCATGCTGCGCCTGATCATCTGGGT
TCTGTCCAAAGTGACTCGTGCCGAAACCCCGCTGTGGGAGGAACTCCGCT
TTCTGCTGGATCATCCGCGTCGATGCTTCACTCTACTCTTTCCGAGGAAT
GCCACGTGGTGGCTCTTTGCAATTTTGGTGGCCTTGAACGGTATCGACTT
GATATTTTTCATTATTCTGGACTTGAATGATTCGGCCGTCACATCCCTGC
CCACTGGTATCCGTATCGTGGACGGTCTGTTCCAGGCAGCCTGTACTCGA
ACCGCCGGCTTAGCTGTCATCTCTGTATCAGACTTACACCCAGCTGTGCA
GGTGTCCTACTTGATCATGATGTATATATCCGTCTTTCCCATCGCCATTT
CTTTGCGACGCACCAACGTATATGAGGAGAAGAGTCTGGGTATCTACGCT
TCTACCGAGGATGATGAGTCGGATGAGAACCAGACACCGCCCAGCTATAT
CGGAGCGCATTTGCGGAAGCAACTCAGTTTTGATCTATGGTACGTGTTCC
TGGGCCTGTTCATCATCACTATTGTGGAAGGCAAGCGCCTCCAGCAGCAA
GATGAGTATTCCTTCCAAGTGTGGTCGGTGCTGTTCGAGGTCGTATCAGC
GTACGGCACTGTTGGTCTGTCGCTCGGGTATCCCGGAGTCAATGCCTCCT
TCTCCAGCCAGTTTCAGGTTCTCTCCAAGCTGGTCATCATTGCGATGCAA
ATCCGAGGCCGTCATCGCGGTCTGCCCTATGCCTTGGACCGCGCCATTCT
GCTCCCTTCGGAATCTCTGAATCAGAACGAGATCGCAGACGCAGAACGGC
GTATGCGTCGTCGCACCTCTAGCCTTAGCCAGATGTCTATGGACCGCCAG
CAATCTCAGGGTCGACCGKAGCACGGGGCTTCTACGAGTCTCGATCCAAA
GGACCGGGCAAGCCAGACATGGAACAATGGCGACATCATCCGTCGTCAGT
CGACGATACGGTCACAGCGCTCGCAGCGCTGA
back to top

Coding sequence (CDS) from alignment at An03:527422..529953-

>CBS51388_002611-T1 ID=CBS51388_002611-T1|Name=CBS51388_002611-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2532bp|location=Sequence derived from alignment at An03:527422..529953- (Aspergillus niger CBS 513.88)
ATGTTTTCCGCCGTGCTGCGGCGGGCGACCTCGGTCACTTCACGCTTCAC
CTCCCACATTCCATGGCTAAAGAACCTGCGCATGAATTTTGTGCTCATCC
ACTATGTCTACATTATCGCCACCTCTTTGCTTTCTTCAATCATCATCTAT
CCAGGGGCTAATCTAGACTACACCGATGCCCTCTTCCTATCTGCCGGCGC
CGCCACCCAGAGCGGTCTCAACACCGTCGACCTCAATACCTTGCATACCT
ACCAGCAGATCGTTTTGTACGTGGTCTCCATGCTGACTACTCCCATCTTC
ATCCACACTGTGCTGGTCTTCGTGCGTCTTTACTGGTTTGAAAAGCGATT
TCAGCATGTCGTCAGCGATGCGCGCGCCCTTCGCCATACTCGCTCTCGCC
TCCGTACCATAAGCGAAGATAAGGATGGACAATCCTCTTCCCGGGAAGAG
GCTGGTGTCGCCGGTCGGTCTATCGTCGTCCTGCGCGACACACTAGGTCA
TCCGGGAAGCCGGCAGCAGGCCAAGGAGAAATCTGGCGAGGACTCACCCC
CCGCCTCTCCCACCGCGCGGGATCCACCCGAAAATTTGGGCGAAGATGCG
AGCAATGCCCTTAACCAAAAGTTAGGGATAGGACTAGGGAACAGTCTAGG
AAACCTTCGTGTTCCGGCTCAGCTGAGCCCAGAACATCATATTGCATTCC
TGGAGAATCAACGGAGAAACAAAGGCGCTCTGCGAATCCCTAGCCCTCGG
GAGTATGACAACGGTGGCGCACCACAAGTATTGGAGGAAGAAGAGGAGGA
GGAGTTAAATCGACCCGTTCGCACATCTAGCAATTCTTCGAGTTCCGAGC
GCAGCCCATGCGATATCAGCAAAGAGGATGAGAATGACAAGGACGAGGAC
GACGAGGACGATGACAAAGACGAGGATAGGCCGCGCAGACTCGATGGCCC
CCATATTACGATTAACGAGCCGGATATGATCCGGACAAGGACGCGGAACT
CTACTTTCCCCCGATTAGATACACGTCCCACTTTCCGTGAAACAAAGAAT
GACACTGATGCCTCGCAACTGGGTCGCTTGACGTCGCGGCGACCAACTCT
ACACAATCTTTTCCGCACCCTTACGCAGGAACGTGAACGGTCAACACAGC
CGTATCTCAGCTGGAACGCCACGGTCGGTCGGAACTCCAACTTTGTCGAT
CTGACCGAGGAACAACGTGACGAGCTCGGCGGGATTGAGTATCGGGCATT
GAAGACTCTGGCAGTAGTCCTAATTTCCTACTATGCCTTCTTCCACATTC
TGGGCATTCTGTGCCTCGTGCCCTGGATCATGACCACACATTGGGGCAAA
GTGGTCGAGGAAATCGGACAGGGTCGCCCTTGGTGGGCCATCTTCATGGC
TCAATCAGCTTTTAACGATGTCGGTTTCACTCTCACGCCAGACTCGCTAT
CTTCATTCCAGAGAGCGATATTCCCGCTCCTGCTTATGACGTTTTTGATT
ATTATAGGGAATACGGGATTCCCTTGCATGCTGCGCCTGATCATCTGGGT
TCTGTCCAAAGTGACTCGTGCCGAAACCCCGCTGTGGGAGGAACTCCGCT
TTCTGCTGGATCATCCGCGTCGATGCTTCACTCTACTCTTTCCGAGGAAT
GCCACGTGGTGGCTCTTTGCAATTTTGGTGGCCTTGAACGGTATCGACTT
GATATTTTTCATTATTCTGGACTTGAATGATTCGGCCGTCACATCCCTGC
CCACTGGTATCCGTATCGTGGACGGTCTGTTCCAGGCAGCCTGTACTCGA
ACCGCCGGCTTAGCTGTCATCTCTGTATCAGACTTACACCCAGCTGTGCA
GGTGTCCTACTTGATCATGATGTATATATCCGTCTTTCCCATCGCCATTT
CTTTGCGACGCACCAACGTATATGAGGAGAAGAGTCTGGGTATCTACGCT
TCTACCGAGGATGATGAGTCGGATGAGAACCAGACACCGCCCAGCTATAT
CGGAGCGCATTTGCGGAAGCAACTCAGTTTTGATCTATGGTACGTGTTCC
TGGGCCTGTTCATCATCACTATTGTGGAAGGCAAGCGCCTCCAGCAGCAA
GATGAGTATTCCTTCCAAGTGTGGTCGGTGCTGTTCGAGGTCGTATCAGC
GTACGGCACTGTTGGTCTGTCGCTCGGGTATCCCGGAGTCAATGCCTCCT
TCTCCAGCCAGTTTCAGGTTCTCTCCAAGCTGGTCATCATTGCGATGCAA
ATCCGAGGCCGTCATCGCGGTCTGCCCTATGCCTTGGACCGCGCCATTCT
GCTCCCTTCGGAATCTCTGAATCAGAACGAGATCGCAGACGCAGAACGGC
GTATGCGTCGTCGCACCTCTAGCCTTAGCCAGATGTCTATGGACCGCCAG
CAATCTCAGGGTCGACCGKAGCACGGGGCTTCTACGAGTCTCGATCCAAA
GGACCGGGCAAGCCAGACATGGAACAATGGCGACATCATCCGTCGTCAGT
CGACGATACGGTCACAGCGCTCGCAGCGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
GO:0015079potassium ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0055085transmembrane transport
GO:0030007cellular potassium ion homeostasis
GO:0071805potassium ion transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002611CBS51388_002611Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002611-T1.cdsCBS51388_002611-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002611-T1.exon1CBS51388_002611-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002611-T1CBS51388_002611-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003445
DBxrefInterPro:IPR015958
DBxrefInterPro:IPR004773
DBxrefPFAM:PF02386
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:527422..529953 -
Powered by Drupal