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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:531359..532999- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002612-T1 ID=CBS51388_002612-T1|Name=CBS51388_002612-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1641bp|location=Sequence derived from alignment at An03:531359..532999- (Aspergillus niger CBS 513.88)
ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCC
CGAGGATTTCGAGGACAGTCAAACGGGATTGGAAATACCTTCGACCCCTT
CAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA
TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACT
GACATTGTCTCAACCATCGCAGCACAGTACACCAATGGATCATCCACCAA
AGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA
ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATC
TTCAGCTTCACTCGCTCTAGAACCAGAAAATAAGGACAAAGAGGGAGGGT
CTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT
ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCT
GGATGCCAACAAAGGGAAAGGAGACAGATCTGGTTTCTTTACACCGGAGG
AAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC
ATGTCGAGCGATACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAA
GTCAAACCCCTTCCCTTGTCCTACGGAAATCACCACAAAACCGGCTTTCT
GGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT
CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTG
GACTGCCGAACAAGATGACGAACTCATCTTACTTCATGAACGCCACGGGC
CCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG
ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGG
GCCTTGGTCTGAATGGGAAGTATCTGCACTACTAGAGCATCTACAGGCCT
GGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT
GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGA
CAACTGCCGTTCCAGGCAGCAGTGTGGAGACAAATTTCGCAAGATCAGGC
GCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC
CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGAT
TACGTCTTCTCAGAGCCAATCAAACAAGCACTTTAAAAGTTCTGAATACG
TGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT
TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTC
TTCGAAGTCGCTGAAATCTGCACCCAAGAACGTCAATCATTCAGTTCATT
CCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA
GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGA
TACCGGTAGTCTTCGTTCGGTACAACCGTCTGGCAAGAAGCAGTCTTCGG
GACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA back to topCoding sequence (CDS) from alignment at An03:531359..532999- >CBS51388_002612-T1 ID=CBS51388_002612-T1|Name=CBS51388_002612-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1641bp|location=Sequence derived from alignment at An03:531359..532999- (Aspergillus niger CBS 513.88)
ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCC
CGAGGATTTCGAGGACAGTCAAACGGGATTGGAAATACCTTCGACCCCTT
CAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA
TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACT
GACATTGTCTCAACCATCGCAGCACAGTACACCAATGGATCATCCACCAA
AGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA
ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATC
TTCAGCTTCACTCGCTCTAGAACCAGAAAATAAGGACAAAGAGGGAGGGT
CTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT
ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCT
GGATGCCAACAAAGGGAAAGGAGACAGATCTGGTTTCTTTACACCGGAGG
AAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC
ATGTCGAGCGATACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAA
GTCAAACCCCTTCCCTTGTCCTACGGAAATCACCACAAAACCGGCTTTCT
GGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT
CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTG
GACTGCCGAACAAGATGACGAACTCATCTTACTTCATGAACGCCACGGGC
CCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG
ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGG
GCCTTGGTCTGAATGGGAAGTATCTGCACTACTAGAGCATCTACAGGCCT
GGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT
GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGA
CAACTGCCGTTCCAGGCAGCAGTGTGGAGACAAATTTCGCAAGATCAGGC
GCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC
CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGAT
TACGTCTTCTCAGAGCCAATCAAACAAGCACTTTAAAAGTTCTGAATACG
TGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT
TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTC
TTCGAAGTCGCTGAAATCTGCACCCAAGAACGTCAATCATTCAGTTCATT
CCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA
GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGA
TACCGGTAGTCTTCGTTCGGTACAACCGTCTGGCAAGAAGCAGTCTTCGG
GACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009057 |
| DBxref | InterPro:IPR017930 |
| DBxref | InterPro:IPR017877 |
| DBxref | InterPro:IPR001005 |
| DBxref | PFAM:PF13921 |
| DBxref | PFAM:PF00249 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:531359..532999 - |
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