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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:565107..568518- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002628-T1 ID=CBS51388_002628-T1|Name=CBS51388_002628-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3412bp|location=Sequence derived from alignment at An03:565107..568518- (Aspergillus niger CBS 513.88)
ATGGGTGTCCAGGGGCTCTGGACGGTCGTACATCCTTGTGCACGGCCCAT
CAAATTAGAAACTCTCAACAAAAAGCGCCTGGCTGTTGACGCATCGATAT
GGATATATCAATTTTTGAAGGCGGTACGCGACAAAGAAGGCAATGCCCTC
CGGAACTCTCATATCGTGGGCTTCTTTCGGCGCATATGCAAGCTCCTCTA
CTTTGGTATTCAGCCGGTCTTCGTGTTTGACGGTGGCGCTCCAGTACTCA
AGCGCCAAACTATAGCAAACCGGAAGAAACGGCGCGAGGGTCGGCGAGAA
GATGCCGTGCGGACCGCTGGAAAGCTGCTGGCTGTGCAGCTGCAAAGGTC
TGCTGAGGAAGAGGCGGCTACCCGCCGGAGGGGGAGAACGGAAAATGAAG
AGGAGGTGCCAGACAACCCAGTTTATGTTGGTGATGCTTTCATAACCGAA
CAGGAAAAGCAGCAGACGCGCTCGTTCAAGAAGAAGGACGCCTACCATCT
GCCGGAGTTACAAACCAGTCTTGAAGAGATGGGGGCCCCCAATGACCCTC
GTATCATGTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGATAGCCCATTCTTCGTCAGTCTCCCGGCGACGGACCGG
TACAACATTCTCAATGCGGCCAGGCTCCGAAGCCGTCTCCGGATGGGGTA
CTCAAAGGAGCAACTAGACAGCATGTTTCCTGATAGAATGGCATTCTCGA
AGTTTCAAATCGAGCGTGTAAAGGAGCGCAATGACTTAACGCAGCGCCTG
ATGAATATTAACGGCATGAACGGTGAAGATGCTCTGTACAAATCAGGACA
ACGTATTGCCGGAGAACGCGGGAAGGAGTATGTCTTAGTGAAGGACGATA
CCATCGAAGGTGGCTGGGTTTTGGGTGTTGTGGGAAATAAGGAAGGTCAA
GAAGATAAACCTATCGATGCTGACCAATATGGTCAGCAGCTGATATTCCC
AGATAAAGAGGATGATTCGAATGACGATGACGGAGGATTTGAAGATGTAC
CTATTGAAGGATTCAACCGACTCCCTAAGCTGCCTTTTCTCCAGAAAGGG
GGTTTCGATGAGCCAAACAGGAATCAGATGCGTGATAGCTTGAATACGAG
AGGCCCCGAGCTGCAGGCAGCCAACGAAGACTCCCTTTTCGTGGAAGGTG
GTCAGGATGAATTCCTATCGAAGCATAACCGCCATACTGCAGATACTTTG
TTCGATATTAGTGGAGATGATGATGACGAAACGCTTCAACGAGCGATCGC
GATGTCACTCGAACCTGGAGGGGATATCAATAATGATGATCTACCTGAAA
TTCAGCTTAACCAGAACCATATGTCTCTTCCAACTATCGATGAGGCCCCG
GCAAACGTTACGGATCATAGTGATGACGAAGGAATGGACTTTGTCGCCGC
CTTAGCACAGTCTAAGAGAATAAAGAAAGCACCGTCCAAAGTGGCAGATA
ATCCCTTCGATGGTCCGCTACCCTTTGAGTCACTTAAACCGCTCAAAACT
GGAAAGTCACTCAATCGTGCTCAAATACCCGAACAAGACGCTGGCGCCAA
AACATCCGACAAAGAACCAAGTAAGACGAAGGATAACCAGCCACTGCCGC
CGTGGTTCTCAGGGCCATCGCAAACTGTCAAAAATGTTGAATTTGTTAGT
GATGAGGTTGATCTTCGTCCAGTGGCGAAGCCGCCTACTGAGCAGAACAT
ACCAGATCATGTGTTCATCGTTGGCGATGAAGACGCGACGGAGGATCATA
ATTTAGAGTCTTCAAAAGGCTCAAAGCCATTCATTGACTTGGAGGACCCA
ACTCCTCAACTGAACGTTGTTAGTCAAGAGGTTCAAATCAAGCGCGAGAA
TAGACCAGAAATAACTCCTGTCGAAGCACAAGCTACTGAGACAAAGGACG
CCGAAGCTTTGGAGGCACACATGGGAGATAGTGTCCCAGTGGATGCGTCT
AATCATTCTATGACGAAACACACCTCCTTTGATGATAAACCAGATTTGAG
GCATATCGAAAAGTCGCCTTCGCCTGAGTTCGAGGATGTTGTCTTGCAGC
CCGACAATGTACCCGCGGAACCCATTGCACTAGATCAATCAGATCAAGTG
GAGGAATATTATGATGAGGAAATTTTCTCAGATCCTGAAGACGAGCAATT
ACTCGAACAGCTTGCGGCTGAAGGGGAAGAGCATGTACGCTTTGCAGCGA
CACTAAACTCTACTTCTCACACAGAACTTCCATTTGACTACGAGCAAGAA
CTGAGACAATTGCGATCTCAGCAAAAGAAGGACCGCAGAGATGCAGACGA
AGTGTCACAAGTCATGATTACTGAATGCCAGCAGTTGCTGAGGCTATTCG
GTCTTCCATACATCACGGCCCCTATGGAAGCTGAAGCCCAGTGTGCAGAA
CTGGTGTCACTCGGCCTTGTTGATGGTATCATCACCGATGATAGTGATGT
GTTTTTATTCGGAGGAACACGCGTTTACAAAAACATGTTCAACCAAAGCA
AGTTTGTCGAATGCTACCTCACAACCGACCTGGAGAAAGAGTACTCTTTG
TTTCGTACCAAACTCATCAGGCTTGCCCATCTATTAGGAAGCGACTACAC
AGAGGGCATCCCCGGCATCGGGCCTGTAACTGCTCTAGAGATCCTCACTG
AATTCGGGACCCTGGAAGACTTCCGTGATTGGTGGACTCAGGTGCAAACA
GGACTCAACATGGGCAACGATAGCCATGCAACATTCTACAAGAAGTTCAA
AAAGCATGCGACTAAAATCTTCCTACCACCATCTTTCCCCGATCCCCGAG
TCGATGCCGCGTACCTGGAACCAGAGGTGGACTCGGACCCGTCTCCCTTC
CAGTGGGGAGTACCCGACTTACATGGCCTGCGGGACTTCCTTATGTCAAC
AATCGGCTGGAGTCAAGAACGCACTGATGAGGTCCTGGTGCCCGTAATTC
GCGACATGAACCGCAGAGATCAGGAGGGCACACAATCGAATATTACTAGT
TTCTTCAGCGGTCCACAAGGAGCGGGTGCCTTTGCACCACGTGTTCGCAG
TGGTGGCCAGACAAGAATGGAGAAAGCATTTAGTCGACTCCGGCAGCAAG
CTGCATCTGTGGAACAGCCGGATTCAACTGGCGTAGATGGTTACTTGGTT
GATCCAGCCGCAGATAATTCCTTGGAGAGTCCAGTAACGTCAACAAGGAA
GGAGGCGCGCACCAAACGAGGGCGTCATGGAGGACGAACTACAAAGGATG
GGCATGAAGACATCACGGACAGGACCGCTACCAACAAAAAACGTCGGACC
CGCGCCAAGTAG back to topCoding sequence (CDS) from alignment at An03:565107..568518- >CBS51388_002628-T1 ID=CBS51388_002628-T1|Name=CBS51388_002628-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6576bp|location=Sequence derived from alignment at An03:565107..568518- (Aspergillus niger CBS 513.88)
TCTCCCGGCGACGGACCGGTACAACATTCTCAATGCGGCCAGGCTCCGAA
GCCGTCTCCGGATGGGGTACTCAAAGGAGCAACTAGACAGCATGTTTCCT
GATAGAATGGCATTCTCGAAGTTTCAAATCGAGCGTGTAAAGGAGCGCAA
TGACTTAACGCAGCGCCTGATGAATATTAACGGCATGAACGGTGAAGATG
CTCTGTACAAATCAGGACAACGTATTGCCGGAGAACGCGGGAAGGAGTAT
GTCTTAGTGAAGGACGATACCATCGAAGGTGGCTGGGTTTTGGGTGTTGT
GGGAAATAAGGAAGGTCAAGAAGATAAACCTATCGATGCTGACCAATATG
GTCAGCAGCTGATATTCCCAGATAAAGAGGATGATTCGAATGACGATGAC
GGAGGATTTGAAGATGTACCTATTGAAGGATTCAACCGACTCCCTAAGCT
GCCTTTTCTCCAGAAAGGGGGTTTCGATGAGCCAAACAGGAATCAGATGC
GTGATAGCTTGAATACGAGAGGCCCCGAGCTGCAGGCAGCCAACGAAGAC
TCCCTTTTCGTGGAAGGTGGTCAGGATGAATTCCTATCGAAGCATAACCG
CCATACTGCAGATACTTTGTTCGATATTAGTGGAGATGATGATGACGAAA
CGCTTCAACGAGCGATCGCGATGTCACTCGAACCTGGAGGGGATATCAAT
AATGATGATCTACCTGAAATTCAGCTTAACCAGAACCATATGTCTCTTCC
AACTATCGATGAGGCCCCGGCAAACGTTACGGATCATAGTGATGACGAAG
GAATGGACTTTGTCGCCGCCTTAGCACAGTCTAAGAGAATAAAGAAAGCA
CCGTCCAAAGTGGCAGATAATCCCTTCGATGGTCCGCTACCCTTTGAGTC
ACTTAAACCGCTCAAAACTGGAAAGTCACTCAATCGTGCTCAAATACCCG
AACAAGACGCTGGCGCCAAAACATCCGACAAAGAACCAAGTAAGACGAAG
GATAACCAGCCACTGCCGCCGTGGTTCTCAGGGCCATCGCAAACTGTCAA
AAATGTTGAATTTGTTAGTGATGAGGTTGATCTTCGTCCAGTGGCGAAGC
CGCCTACTGAGCAGAACATACCAGATCATGTGTTCATCGTTGGCGATGAA
GACGCGACGGAGGATCATAATTTAGAGTCTTCAAAAGGCTCAAAGCCATT
CATTGACTTGGAGGACCCAACTCCTCAACTGAACGTTGTTAGTCAAGAGG
TTCAAATCAAGCGCGAGAATAGACCAGAAATAACTCCTGTCGAAGCACAA
GCTACTGAGACAAAGGACGCCGAAGCTTTGGAGGCACACATGGGAGATAG
TGTCCCAGTGGATGCGTCTAATCATTCTATGACGAAACACACCTCCTTTG
ATGATAAACCAGATTTGAGGCATATCGAAAAGTCGCCTTCGCCTGAGTTC
GAGGATGTTGTCTTGCAGCCCGACAATGTACCCGCGGAACCCATTGCACT
AGATCAATCAGATCAAGTGGAGGAATATTATGATGAGGAAATTTTCTCAG
ATCCTGAAGACGAGCAATTACTCGAACAGCTTGCGGCTGAAGGGGAAGAG
CATGTACGCTTTGCAGCGACACTAAACTCTACTTCTCACACAGAACTTCC
ATTTGACTACGAGCAAGAACTGAGACAATTGCGATCTCAGCAAAAGAAGG
ACCGCAGAGATGCAGACGAAGTGTCACAAGTCATGATTACTGAATGCCAG
CAGTTGCTGAGGCTATTCGGTCTTCCATACATCACGGCCCCTATGGAAGC
TGAAGCCCAGTGTGCAGAACTGGTGTCACTCGGCCTTGTTGATGGTATCA
TCACCGATGATAGTGATGTGTTTTTATTCGGAGGAACACGCGTTTACAAA
AACATGTTCAACCAAAGCAAGTTTGTCGAATGCTACCTCACAACCGACCT
GGAGAAAGAGTACTCTTTGTTTCGTACCAAACTCATCAGGCTTGCCCATC
TATTAGGAAGCGACTACACAGAGGGCATCCCCGGCATCGGGCCTGTAACT
GCTCTAGAGATCCTCACTGAATTCGGGACCCTGGAAGACTTCCGTGATTG
GTGGACTCAGGTGCAAACAGGACTCAACATGGGCAACGATAGCCATGCAA
CATTCTACAAGAAGTTCAAAAAGCATGCGACTAAAATCTTCCTACCACCA
TCTTTCCCCGATCCCCGAGTCGATGCCGCGTACCTGGAACCAGAGGTGGA
CTCGGACCCGTCTCCCTTCCAGTGGGGAGTACCCGACTTACATGGCCTGC
GGGACTTCCTTATGTCAACAATCGGCTGGAGTCAAGAACGCACTGATGAG
GTCCTGGTGCCCGTAATTCGCGACATGAACCGCAGAGATCAGGAGGGCAC
ACAATCGAATATTACTAGTTTCTTCAGCGGTCCACAAGGAGCGGGTGCCT
TTGCACCACGTGTTCGCAGTGGTGGCCAGACAAGAATGGAGAAAGCATTT
AGTCGACTCCGGCAGCAAGCTGCATCTGTGGAACAGCCGGATTCAACTGG
CGTAGATGGTTACTTGGTTGATCCAGCCGCAGATAATTCCTTGGAGAGTC
CAGTAACGTCAACAAGGAAGGAGGCGCGCACCAAACGAGGGCGTCATGGA
GGACGAACTACAAAGGATGGGCATGAAGACATCACGGACAGGACCGCTAC
CAACAAAAAACGTCGGACCCGCGCCAAGTAGATGGGTGTCCAGGGGCTCT
GGACGGTCGTACATCCTTGTGCACGGCCCATCAAATTAGAAACTCTCAAC
AAAAAGCGCCTGGCTGTTGACGCATCGATATGGATATATCAATTTTTGAA
GGCGGTACGCGACAAAGAAGGCAATGCCCTCCGGAACTCTCATATCGTGG
GCTTCTTTCGGCGCATATGCAAGCTCCTCTACTTTGGTATTCAGCCGGTC
TTCGTGTTTGACGGTGGCGCTCCAGTACTCAAGCGCCAAACTATAGCAAA
CCGGAAGAAACGGCGCGAGGGTCGGCGAGAAGATGCCGTGCGGACCGCTG
GAAAGCTGCTGGCTGTGCAGCTGCAAAGGTCTGCTGAGGAAGAGGCGGCT
ACCCGCCGGAGGGGGAGAACGGAAAATGAAGAGGAGGTGCCAGACAACCC
AGTTTATGTTGGTGATGCTTTCATAACCGAACAGGAAAAGCAGCAGACGC
GCTCGTTCAAGAAGAAGGACGCCTACCATCTGCCGGAGTTACAAACCAGT
CTTGAAGAGATGGGGGCCCCCAATGACCCTCGTATCATTCTCCCGGCGAC
GGACCGGTACAACATTCTCAATGCGGCCAGGCTCCGAAGCCGTCTCCGGA
TGGGGTACTCAAAGGAGCAACTAGACAGCATGTTTCCTGATAGAATGGCA
TTCTCGAAGTTTCAAATCGAGCGTGTAAAGGAGCGCAATGACTTAACGCA
GCGCCTGATGAATATTAACGGCATGAACGGTGAAGATGCTCTGTACAAAT
CAGGACAACGTATTGCCGGAGAACGCGGGAAGGAGTATGTCTTAGTGAAG
GACGATACCATCGAAGGTGGCTGGGTTTTGGGTGTTGTGGGAAATAAGGA
AGGTCAAGAAGATAAACCTATCGATGCTGACCAATATGGTCAGCAGCTGA
TATTCCCAGATAAAGAGGATGATTCGAATGACGATGACGGAGGATTTGAA
GATGTACCTATTGAAGGATTCAACCGACTCCCTAAGCTGCCTTTTCTCCA
GAAAGGGGGTTTCGATGAGCCAAACAGGAATCAGATGCGTGATAGCTTGA
ATACGAGAGGCCCCGAGCTGCAGGCAGCCAACGAAGACTCCCTTTTCGTG
GAAGGTGGTCAGGATGAATTCCTATCGAAGCATAACCGCCATACTGCAGA
TACTTTGTTCGATATTAGTGGAGATGATGATGACGAAACGCTTCAACGAG
CGATCGCGATGTCACTCGAACCTGGAGGGGATATCAATAATGATGATCTA
CCTGAAATTCAGCTTAACCAGAACCATATGTCTCTTCCAACTATCGATGA
GGCCCCGGCAAACGTTACGGATCATAGTGATGACGAAGGAATGGACTTTG
TCGCCGCCTTAGCACAGTCTAAGAGAATAAAGAAAGCACCGTCCAAAGTG
GCAGATAATCCCTTCGATGGTCCGCTACCCTTTGAGTCACTTAAACCGCT
CAAAACTGGAAAGTCACTCAATCGTGCTCAAATACCCGAACAAGACGCTG
GCGCCAAAACATCCGACAAAGAACCAAGTAAGACGAAGGATAACCAGCCA
CTGCCGCCGTGGTTCTCAGGGCCATCGCAAACTGTCAAAAATGTTGAATT
TGTTAGTGATGAGGTTGATCTTCGTCCAGTGGCGAAGCCGCCTACTGAGC
AGAACATACCAGATCATGTGTTCATCGTTGGCGATGAAGACGCGACGGAG
GATCATAATTTAGAGTCTTCAAAAGGCTCAAAGCCATTCATTGACTTGGA
GGACCCAACTCCTCAACTGAACGTTGTTAGTCAAGAGGTTCAAATCAAGC
GCGAGAATAGACCAGAAATAACTCCTGTCGAAGCACAAGCTACTGAGACA
AAGGACGCCGAAGCTTTGGAGGCACACATGGGAGATAGTGTCCCAGTGGA
TGCGTCTAATCATTCTATGACGAAACACACCTCCTTTGATGATAAACCAG
ATTTGAGGCATATCGAAAAGTCGCCTTCGCCTGAGTTCGAGGATGTTGTC
TTGCAGCCCGACAATGTACCCGCGGAACCCATTGCACTAGATCAATCAGA
TCAAGTGGAGGAATATTATGATGAGGAAATTTTCTCAGATCCTGAAGACG
AGCAATTACTCGAACAGCTTGCGGCTGAAGGGGAAGAGCATGTACGCTTT
GCAGCGACACTAAACTCTACTTCTCACACAGAACTTCCATTTGACTACGA
GCAAGAACTGAGACAATTGCGATCTCAGCAAAAGAAGGACCGCAGAGATG
CAGACGAAGTGTCACAAGTCATGATTACTGAATGCCAGCAGTTGCTGAGG
CTATTCGGTCTTCCATACATCACGGCCCCTATGGAAGCTGAAGCCCAGTG
TGCAGAACTGGTGTCACTCGGCCTTGTTGATGGTATCATCACCGATGATA
GTGATGTGTTTTTATTCGGAGGAACACGCGTTTACAAAAACATGTTCAAC
CAAAGCAAGTTTGTCGAATGCTACCTCACAACCGACCTGGAGAAAGAGTA
CTCTTTGTTTCGTACCAAACTCATCAGGCTTGCCCATCTATTAGGAAGCG
ACTACACAGAGGGCATCCCCGGCATCGGGCCTGTAACTGCTCTAGAGATC
CTCACTGAATTCGGGACCCTGGAAGACTTCCGTGATTGGTGGACTCAGGT
GCAAACAGGACTCAACATGGGCAACGATAGCCATGCAACATTCTACAAGA
AGTTCAAAAAGCATGCGACTAAAATCTTCCTACCACCATCTTTCCCCGAT
CCCCGAGTCGATGCCGCGTACCTGGAACCAGAGGTGGACTCGGACCCGTC
TCCCTTCCAGTGGGGAGTACCCGACTTACATGGCCTGCGGGACTTCCTTA
TGTCAACAATCGGCTGGAGTCAAGAACGCACTGATGAGGTCCTGGTGCCC
GTAATTCGCGACATGAACCGCAGAGATCAGGAGGGCACACAATCGAATAT
TACTAGTTTCTTCAGCGGTCCACAAGGAGCGGGTGCCTTTGCACCACGTG
TTCGCAGTGGTGGCCAGACAAGAATGGAGAAAGCATTTAGTCGACTCCGG
CAGCAAGCTGCATCTGTGGAACAGCCGGATTCAACTGGCGTAGATGGTTA
CTTGGTTGATCCAGCCGCAGATAATTCCTTGGAGAGTCCAGTAACGTCAA
CAAGGAAGGAGGCGCGCACCAAACGAGGGCGTCATGGAGGACGAACTACA
AAGGATGGGCATGAAGACATCACGGACAGGACCGCTACCAACAAAAAACG
TCGGACCCGCGCCAAGTAGATGGGTGTCCAGGGGCTCTGGACGGTCGTAC
ATCCTTGTGCACGGCCCATCAAATTAGAAACTCTCAACAAAAAGCGCCTG
GCTGTTGACGCATCGATATGGATATATCAATTTTTGAAGGCGGTACGCGA
CAAAGAAGGCAATGCCCTCCGGAACTCTCATATCGTGGGCTTCTTTCGGC
GCATATGCAAGCTCCTCTACTTTGGTATTCAGCCGGTCTTCGTGTTTGAC
GGTGGCGCTCCAGTACTCAAGCGCCAAACTATAGCAAACCGGAAGAAACG
GCGCGAGGGTCGGCGAGAAGATGCCGTGCGGACCGCTGGAAAGCTGCTGG
CTGTGCAGCTGCAAAGGTCTGCTGAGGAAGAGGCGGCTACCCGCCGGAGG
GGGAGAACGGAAAATGAAGAGGAGGTGCCAGACAACCCAGTTTATGTTGG
TGATGCTTTCATAACCGAACAGGAAAAGCAGCAGACGCGCTCGTTCAAGA
AGAAGGACGCCTACCATCTGCCGGAGTTACAAACCAGTCTTGAAGAGATG
GGGGCCCCCAATGACCCTCGTATCAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016788 | hydrolase activity, acting on ester bonds |
| GO:0003677 | DNA binding |
| GO:0003824 | catalytic activity |
| GO:0004518 | nuclease activity |
| GO:0004519 | endonuclease activity |
| GO:0003697 | single-stranded DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006289 | nucleotide-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260B3H |
| DBxref | InterPro:IPR029060 |
| DBxref | InterPro:IPR036279 |
| DBxref | InterPro:IPR019974 |
| DBxref | InterPro:IPR008918 |
| DBxref | InterPro:IPR006085 |
| DBxref | InterPro:IPR006086 |
| DBxref | InterPro:IPR006084 |
| DBxref | InterPro:IPR001044 |
| DBxref | PFAM:PF00752 |
| DBxref | PFAM:PF00867 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:565107..568518 - |
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