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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:717073..718815- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002659-T1 ID=CBS51388_002659-T1|Name=CBS51388_002659-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1743bp|location=Sequence derived from alignment at An03:717073..718815- (Aspergillus niger CBS 513.88)
ATGGACCCCGCCGTCCTGCGCGAGGTCTCCCGCGTCGATCCTGTGGTTCC
TTTCCGCGCAACCACCCATCATCTCCATCATACTTGGGCGCAGACCTTCT
ACTCGCGTCCCGAACTTTACGTGCGCCCGCAGTCTATTGAGGAAATTCGG
AAGCTGGTCAACCTCGCTCGTCATTGTCGGCGTCGTCTGGTCACCGTGGG
GAGTGGCCACTCCCCCTCCGATCTGACCTGCACCTCTGCCTGGCTGGTAA
ATTTGGATGATTTTAATCGGGTGTTGGAGGTTTCGCCGGAGACCGGGGTG
GTGACCGTTCAGGCGGGGATTCGGTTGAGAGACTTGGGCGCACAGCTGGA
GAAACATGGCTTGACTTTGTCGAACTTGGGTAGTATTGATAGTCAGTCGG
TCGCGGGTGTGATCTCCACGGGTACCCATGGAAGTTCTCTCCAGCATGGC
TTGATCTCCGAGTGTATCTTATCGCTGACTCTCATGCTGGCTAATGGGCA
GCTGGTGCGGTGTAGCGCGACCAGTAACCCGTCGCTGTTCCGGGCTGCGC
TGATTTCTCTGGGGGCACTTGGTATCATTGTCGAGGTCACGCTGCAGGCG
GAGCCCGCGTTCAAGGTGGCCTGGCGACAGACGCGACGCAAACTGTCGAG
TGTGCTGGCCGAATGGTCATCCGGGTTGTGGACATCGCATGAATTTGTTC
GGGTATGGTGGATGCCCTATGAGAAGAGTGCGGTTGTCTGGCACGCCGAC
AAAACCGACCTCCCGCTGCGAAACCCGCCCAAGTCCTTTTATGGGGAGAC
ACTCGGTTACCATATCTACCATAATTTGCTGGCCCTGGCTAACTATTTCC
CTCGTATCCTCCCGTGGGTGGAATGGCTGGTGTTTGGTTTGCAGTATGGT
TTCAAGCCGGAAGCCATCGTGACGGAGGCGGTCGAACCAGCCCGCTCTGG
TCTCCTCATGAATTGTCTGTACTCGCAGTTTGTCAACGAATGGGCACTCC
CGCTTGAAAAGGGCCCCGAAGCCATCACTCGTCTCTCCGCCTGGTTGAAT
GGTGATCTCGAAACAGCGCGTATCCCTTTTTCCGTCGACGGTCTGTGGGT
GCATTGCCCCATCGAAGTCAGAGTCGCGGACTCTACCTACAACAAGACAC
CCCGTCCGTTCCTAGATCCTACCTCTTCCAGCGGACCGACCCTGTATCTC
AATGCGACGCTCTATCGCCCGTACCATCGGGATCCCCCCTGCACGGAACG
GTATTACGAGGCATTTGAGTGGCTTATGCGCGAAATGGGCGCAAGGCCGC
ATTGGGCTAAGAACTTCCGGACATCGAGGGAGGAGCTGAAAGATCTGTAT
GGAGAGGATATGGTGGAATGGTTAAAGGTGCGCCAAGATGTGGATTCCGA
CGGCATGTTCCTTGGTGAATGGCATTACCGAAACCTCGCCTTGCCAGGTA
CTGAGGACGAGTCAGAACCGGCCGTCCTTCCGCTTCTCGAGCGCGAAAAG
ACTCGCCGGAAGGCAGACGTTCGGGGATCCGGTGACGGCATGGAGTGGAT
CGGACACAAGCAATGGCAAGGGAAGCAGGGTCGCCAGGCTGCTACTTTCG
TGCCCGCGCTAGGAAACGAGAAGATCCAAGGGTCATCAGACGAGATTATT
CTCAGTCCTCCCACAACAGCAACCAGTGAAGAGAGCTTTGATCTTCTGGC
GGCGGGAGAGGCTAGTGTTGTTCTTCCTGAATCTGGCATGTGA back to topCoding sequence (CDS) from alignment at An03:717073..718815- >CBS51388_002659-T1 ID=CBS51388_002659-T1|Name=CBS51388_002659-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1743bp|location=Sequence derived from alignment at An03:717073..718815- (Aspergillus niger CBS 513.88)
ATGGACCCCGCCGTCCTGCGCGAGGTCTCCCGCGTCGATCCTGTGGTTCC
TTTCCGCGCAACCACCCATCATCTCCATCATACTTGGGCGCAGACCTTCT
ACTCGCGTCCCGAACTTTACGTGCGCCCGCAGTCTATTGAGGAAATTCGG
AAGCTGGTCAACCTCGCTCGTCATTGTCGGCGTCGTCTGGTCACCGTGGG
GAGTGGCCACTCCCCCTCCGATCTGACCTGCACCTCTGCCTGGCTGGTAA
ATTTGGATGATTTTAATCGGGTGTTGGAGGTTTCGCCGGAGACCGGGGTG
GTGACCGTTCAGGCGGGGATTCGGTTGAGAGACTTGGGCGCACAGCTGGA
GAAACATGGCTTGACTTTGTCGAACTTGGGTAGTATTGATAGTCAGTCGG
TCGCGGGTGTGATCTCCACGGGTACCCATGGAAGTTCTCTCCAGCATGGC
TTGATCTCCGAGTGTATCTTATCGCTGACTCTCATGCTGGCTAATGGGCA
GCTGGTGCGGTGTAGCGCGACCAGTAACCCGTCGCTGTTCCGGGCTGCGC
TGATTTCTCTGGGGGCACTTGGTATCATTGTCGAGGTCACGCTGCAGGCG
GAGCCCGCGTTCAAGGTGGCCTGGCGACAGACGCGACGCAAACTGTCGAG
TGTGCTGGCCGAATGGTCATCCGGGTTGTGGACATCGCATGAATTTGTTC
GGGTATGGTGGATGCCCTATGAGAAGAGTGCGGTTGTCTGGCACGCCGAC
AAAACCGACCTCCCGCTGCGAAACCCGCCCAAGTCCTTTTATGGGGAGAC
ACTCGGTTACCATATCTACCATAATTTGCTGGCCCTGGCTAACTATTTCC
CTCGTATCCTCCCGTGGGTGGAATGGCTGGTGTTTGGTTTGCAGTATGGT
TTCAAGCCGGAAGCCATCGTGACGGAGGCGGTCGAACCAGCCCGCTCTGG
TCTCCTCATGAATTGTCTGTACTCGCAGTTTGTCAACGAATGGGCACTCC
CGCTTGAAAAGGGCCCCGAAGCCATCACTCGTCTCTCCGCCTGGTTGAAT
GGTGATCTCGAAACAGCGCGTATCCCTTTTTCCGTCGACGGTCTGTGGGT
GCATTGCCCCATCGAAGTCAGAGTCGCGGACTCTACCTACAACAAGACAC
CCCGTCCGTTCCTAGATCCTACCTCTTCCAGCGGACCGACCCTGTATCTC
AATGCGACGCTCTATCGCCCGTACCATCGGGATCCCCCCTGCACGGAACG
GTATTACGAGGCATTTGAGTGGCTTATGCGCGAAATGGGCGCAAGGCCGC
ATTGGGCTAAGAACTTCCGGACATCGAGGGAGGAGCTGAAAGATCTGTAT
GGAGAGGATATGGTGGAATGGTTAAAGGTGCGCCAAGATGTGGATTCCGA
CGGCATGTTCCTTGGTGAATGGCATTACCGAAACCTCGCCTTGCCAGGTA
CTGAGGACGAGTCAGAACCGGCCGTCCTTCCGCTTCTCGAGCGCGAAAAG
ACTCGCCGGAAGGCAGACGTTCGGGGATCCGGTGACGGCATGGAGTGGAT
CGGACACAAGCAATGGCAAGGGAAGCAGGGTCGCCAGGCTGCTACTTTCG
TGCCCGCGCTAGGAAACGAGAAGATCCAAGGGTCATCAGACGAGATTATT
CTCAGTCCTCCCACAACAGCAACCAGTGAAGAGAGCTTTGATCTTCTGGC
GGCGGGAGAGGCTAGTGTTGTTCTTCCTGAATCTGGCATGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
| GO:0003885 | D-arabinono-1,4-lactone oxidase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.5 |
| Note | BUSCO:EOG092624X0 |
| Note | SMCOG1138:FAD linked oxidase domain protein |
| DBxref | InterPro:IPR036318 |
| DBxref | InterPro:IPR016166 |
| DBxref | InterPro:IPR006093 |
| DBxref | InterPro:IPR007173 |
| DBxref | InterPro:IPR030654 |
| DBxref | InterPro:IPR006094 |
| DBxref | InterPro:IPR016167 |
| DBxref | InterPro:IPR016169 |
| DBxref | PFAM:PF01565 |
| DBxref | PFAM:PF04030 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:717073..718815 - |
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