|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:790835..791869- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002682-T1 ID=CBS51388_002682-T1|Name=CBS51388_002682-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1035bp|location=Sequence derived from alignment at An03:790835..791869- (Aspergillus niger CBS 513.88)
ATGGCATCCTCCAACACCCAACCCGAAGAACCCATCACCATCCCCCAGGA
CCGGGATGGCGTTGCCTACCTCTACGGCCACCCTCTCCTCAACTCGCTCT
CTCCTCCTCTCCATGCCGCCATCTACAACCACCTCGGGCTGAACTGGATT
CAGATCCCCCTCTCCAGCGTCTGCGGCACCTCCGCCACCTACCCTCCCCC
GTACACACGCTCCCCGCCCATCGACACCTTCCTGTCCTCCATCCGCGCCA
ACCCCAAGTTCGTCGGCTCCTCCGTCACTATGCCCTGGAAGGTCTCCATC
ATGCCGCACCTGGACGACCTTACCGAGGACGCCCGCCAGGCCGGCGCCTG
CAACACTATCTTCCTGCGCGACAATGCCGACGGCTCCCGCTCCTACGTCG
GCACTAACACCGACTGCATCGGTATCCGCGAAGCCCTCGTCCAGAACACC
GTGAACGCTGCTGAACGGTTCGCTGGCAAGCCTGCCCTCGTTGTCGGTGG
TGGTGGTACTGCTCGCTCCGCCATCTACGTTATGCGCAAGTGGCTCGGCG
CCAGCAAGATTTACATTGTGAACCGTGATGCTAGTGAGGTTCAGGCCATT
ATGGAGGAGGATCAGCAGCGCAACCCGTCCGCGGATAAGGCGCCCTTGGT
TCCCGTTACGGATCCGGAGGTCGCGAAGACGCTGGAGACTCCCGCTGCTA
TTGTCTCGGGTATTCCCAACTACCCGCCCAAGACCGAGGAAGAGATTCGT
GCCAGGAATGTCCTGACGGCGTTGTTGGGCGCCAAGGACGATGGCAAGCC
CAAGGGCGTTATTTTGGAGATGTGCTACCACCCTGTTATCTGGACGGAGA
TTGCCGAGTTGGCCGATGCCGCGGGATGGAAGGTTATTGTGGGCTCGGAG
GCGCTGCTCTGGCAGGGTCTGGAGCAGGCCAAGCTTTGGACTGGAAAAGA
CGTGGTTGCTGTTCCGGGCTTGTTGGATATGGTCAAGGAGGTGGTGGCCA
AGAATTTGGCGGAGAGGCAGAAGGCTACTCTGTAA back to topCoding sequence (CDS) from alignment at An03:790835..791869- >CBS51388_002682-T1 ID=CBS51388_002682-T1|Name=CBS51388_002682-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1035bp|location=Sequence derived from alignment at An03:790835..791869- (Aspergillus niger CBS 513.88)
ATGGCATCCTCCAACACCCAACCCGAAGAACCCATCACCATCCCCCAGGA
CCGGGATGGCGTTGCCTACCTCTACGGCCACCCTCTCCTCAACTCGCTCT
CTCCTCCTCTCCATGCCGCCATCTACAACCACCTCGGGCTGAACTGGATT
CAGATCCCCCTCTCCAGCGTCTGCGGCACCTCCGCCACCTACCCTCCCCC
GTACACACGCTCCCCGCCCATCGACACCTTCCTGTCCTCCATCCGCGCCA
ACCCCAAGTTCGTCGGCTCCTCCGTCACTATGCCCTGGAAGGTCTCCATC
ATGCCGCACCTGGACGACCTTACCGAGGACGCCCGCCAGGCCGGCGCCTG
CAACACTATCTTCCTGCGCGACAATGCCGACGGCTCCCGCTCCTACGTCG
GCACTAACACCGACTGCATCGGTATCCGCGAAGCCCTCGTCCAGAACACC
GTGAACGCTGCTGAACGGTTCGCTGGCAAGCCTGCCCTCGTTGTCGGTGG
TGGTGGTACTGCTCGCTCCGCCATCTACGTTATGCGCAAGTGGCTCGGCG
CCAGCAAGATTTACATTGTGAACCGTGATGCTAGTGAGGTTCAGGCCATT
ATGGAGGAGGATCAGCAGCGCAACCCGTCCGCGGATAAGGCGCCCTTGGT
TCCCGTTACGGATCCGGAGGTCGCGAAGACGCTGGAGACTCCCGCTGCTA
TTGTCTCGGGTATTCCCAACTACCCGCCCAAGACCGAGGAAGAGATTCGT
GCCAGGAATGTCCTGACGGCGTTGTTGGGCGCCAAGGACGATGGCAAGCC
CAAGGGCGTTATTTTGGAGATGTGCTACCACCCTGTTATCTGGACGGAGA
TTGCCGAGTTGGCCGATGCCGCGGGATGGAAGGTTATTGTGGGCTCGGAG
GCGCTGCTCTGGCAGGGTCTGGAGCAGGCCAAGCTTTGGACTGGAAAAGA
CGTGGTTGCTGTTCCGGGCTTGTTGGATATGGTCAAGGAGGTGGTGGCCA
AGAATTTGGCGGAGAGGCAGAAGGCTACTCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013708 |
| DBxref | PFAM:PF08501 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:790835..791869 - |
|
