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CBS51388_002683-T1, CBS51388_002683-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002683-T1
Unique NameCBS51388_002683-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:793192..794433+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002683-T1 ID=CBS51388_002683-T1|Name=CBS51388_002683-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1242bp|location=Sequence derived from alignment at An03:793192..794433+ (Aspergillus niger CBS 513.88)
ATGGTGACGGAGGAACAGTCGGCTCCGCCACCCGAACGCGGGATGAGCAC
GCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAGCAATTGCGGAGAA
TAGTACATACTATGATCACGGTTCCTCTAGTTCGGAGCTGACACGATATT
GAATCCAGGAAAACAATCGCCAGAAAGCCATAGCAATACGAGAACAACGC
GAAGCCGAACAAGCTCGAGCTCACAATGCTGATCCTTCGTCCACCAAAGG
TGTCAAGCGAACCTACTCCTCCATGACTGCCTCCGATCCTCCGGCGACTC
TGCGCGATGCGGCCTCTACAGATAATCGCCCCCTAGATGGCATCAAGCCG
GCGCGCAACTTTACCAAATTCGTTGAATACGACTTCTCCAAGATCACCGA
CACGAAGGGTGGGTTCTTGACCGAAGAGGATGACCGCTACAACAAAGCCC
TTCATGTTCGGGATGAGAAGGCGGAGCAGAAGCCAGCGCACATGACGCAG
AAGGAATGGGAGCGACAACAGCTGCTAAAGAATCTCCATCGAGATCGTGC
AGGACCCTTCGAACCGGGGCTCAGTGTGTTGGATGAGCGGACACGACAGA
AAACGTGCCGAGAGTGTGGCAGCTTAGAAATCGACTGGAAATGGGAAGAA
GCGCTCCGGTGCTGTGTCTGCCATGCTTGCAAGGATAAATTTCCGGAGAA
ATACAGTCTACTTACCAAGACCGAGGCACGAGAGGACTACCTCCTGACCA
ATCGTGAGTATCCCCCTGCACAGGTTTGCGGCATGGTTTGCCACTGAGCG
TTCGCTGACCACGGGCCCAACTGCAGCCGAACTTCAGGATGAGGAACTCC
TCCCACACCTGGAGCGCCCGAATCCGCATAAATCAACGTGGAATAACATG
ATGCTGTACCTACGGTATCAGGTCGAAGAGTACGCCTTTTCCGCCAAGAA
ATGGGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAGCGACGCGAGAATG
AGAAGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAAACTTGAAGACCTT
AAGAAGCGTACGCGAGTCGATGCATACCGACGTAGCCGGCAAGGAGCGAC
CGGTGGTAATTTTGGAGATGACCTGGGGGGTGGTGGACGACATGTACATC
AGTGGGGAAGATCGGTCGAAGATCCCAAGACGGGGATTGGGGTCAAGAAA
TGCGTTGACTGCGGGATGGAAGTCGAAGAACTCGAGTTCTAA
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Coding sequence (CDS) from alignment at An03:793192..794433+

>CBS51388_002683-T1 ID=CBS51388_002683-T1|Name=CBS51388_002683-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3339bp|location=Sequence derived from alignment at An03:793192..794433+ (Aspergillus niger CBS 513.88)
ATGGTGACGGAGGAACAGTCGGCTCCGCCACCCGAACGCGGGATGAGCAC
GCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAGCAATTGCGGAGAA
TAGAAAACAATCGCCAGAAAGCCATAGCAATACGAGAACAACGCGAAGCC
GAACAAGCTCGAGCTCACAATGCTGATCCTTCGTCCACCAAAGGTGTCAA
GCGAACCTACTCCTCCATGACTGCCTCCGATCCTCCGGCGACTCTGCGCG
ATGCGGCCTCTACAGATAATCGCCCCCTAGATGGCATCAAGCCGGCGCGC
AACTTTACCAAATTCGTTGAATACGACTTCTCCAAGATCACCGACACGAA
GGGTGGGTTCTTGACCGAAGAGGATGACCGCTACAACAAAGCCCTTCATG
TTCGGGATGAGAAGGCGGAGCAGAAGCCAGCGCACATGACGCAGAAGGAA
TGGGAGCGACAACAGCTGCTAAAGAATCTCCATCGAGATCGTGCAGGACC
CTTCGAACCGGGGCTCAGTGTGTTGGATGAGCGGACACGACAGAAAACGT
GCCGAGAGTGTGGCAGCTTAGAAATCGACTGGAAATGGGAAGAAGCGCTC
CGGTGCTGTGTCTGCCATGCTTGCAAGGATAAATTTCCGGAGAAATACAG
TCTACTTACCAAGACCGAGGCACGAGAGGACTACCTCCTGACCAATCCCG
AACTTCAGGATGAGGAACTCCTCCCACACCTGGAGCGCCCGAATCCGCAT
AAATCAACGTGGAATAACATGATGCTGTACCTACGGTATCAGGTCGAAGA
GTACGCCTTTTCCGCCAAGAAATGGGGCTCACCCGAAGCCTTGGACGCGG
AGTTTGAGCGACGCGAGAATGAGAAGAAGCGCCGGCGGGAGGTCAAATTC
AAGAGCAAACTTGAAGACCTTAAGAAGCGTACGCGAGTCGATGCATACCG
ACGTAGCCGGCAAGGAGCGACCGGTGGTAATTTTGGAGATGACCTGGGGG
GTGGTGGACGACATGTACATCAGTGGGGAAGATCGGTCGAAGATCCCAAG
ACGGGGATTGGGGTCAAGAAATGCGTTGACTGCGGGATGGAAGTCGAAGA
ACTCGAGTTCTAAATGGTGACGGAGGAACAGTCGGCTCCGCCACCCGAAC
GCGGGATGAGCACGCCAGGCGATCTCAAGCGGAATCCGCTAACCCCAGAG
CAATTGCGGAGAATAGAAAACAATCGCCAGAAAGCCATAGCAATACGAGA
ACAACGCGAAGCCGAACAAGCTCGAGCTCACAATGCTGATCCTTCGTCCA
CCAAAGGTGTCAAGCGAACCTACTCCTCCATGACTGCCTCCGATCCTCCG
GCGACTCTGCGCGATGCGGCCTCTACAGATAATCGCCCCCTAGATGGCAT
CAAGCCGGCGCGCAACTTTACCAAATTCGTTGAATACGACTTCTCCAAGA
TCACCGACACGAAGGGTGGGTTCTTGACCGAAGAGGATGACCGCTACAAC
AAAGCCCTTCATGTTCGGGATGAGAAGGCGGAGCAGAAGCCAGCGCACAT
GACGCAGAAGGAATGGGAGCGACAACAGCTGCTAAAGAATCTCCATCGAG
ATCGTGCAGGACCCTTCGAACCGGGGCTCAGTGTGTTGGATGAGCGGACA
CGACAGAAAACGTGCCGAGAGTGTGGCAGCTTAGAAATCGACTGGAAATG
GGAAGAAGCGCTCCGGTGCTGTGTCTGCCATGCTTGCAAGGATAAATTTC
CGGAGAAATACAGTCTACTTACCAAGACCGAGGCACGAGAGGACTACCTC
CTGACCAATCCCGAACTTCAGGATGAGGAACTCCTCCCACACCTGGAGCG
CCCGAATCCGCATAAATCAACGTGGAATAACATGATGCTGTACCTACGGT
ATCAGGTCGAAGAGTACGCCTTTTCCGCCAAGAAATGGGGCTCACCCGAA
GCCTTGGACGCGGAGTTTGAGCGACGCGAGAATGAGAAGAAGCGCCGGCG
GGAGGTCAAATTCAAGAGCAAACTTGAAGACCTTAAGAAGCGTACGCGAG
TCGATGCATACCGACGTAGCCGGCAAGGAGCGACCGGTGGTAATTTTGGA
GATGACCTGGGGGGTGGTGGACGACATGTACATCAGTGGGGAAGATCGGT
CGAAGATCCCAAGACGGGGATTGGGGTCAAGAAATGCGTTGACTGCGGGA
TGGAAGTCGAAGAACTCGAGTTCTAAATGGTGACGGAGGAACAGTCGGCT
CCGCCACCCGAACGCGGGATGAGCACGCCAGGCGATCTCAAGCGGAATCC
GCTAACCCCAGAGCAATTGCGGAGAATAGAAAACAATCGCCAGAAAGCCA
TAGCAATACGAGAACAACGCGAAGCCGAACAAGCTCGAGCTCACAATGCT
GATCCTTCGTCCACCAAAGGTGTCAAGCGAACCTACTCCTCCATGACTGC
CTCCGATCCTCCGGCGACTCTGCGCGATGCGGCCTCTACAGATAATCGCC
CCCTAGATGGCATCAAGCCGGCGCGCAACTTTACCAAATTCGTTGAATAC
GACTTCTCCAAGATCACCGACACGAAGGGTGGGTTCTTGACCGAAGAGGA
TGACCGCTACAACAAAGCCCTTCATGTTCGGGATGAGAAGGCGGAGCAGA
AGCCAGCGCACATGACGCAGAAGGAATGGGAGCGACAACAGCTGCTAAAG
AATCTCCATCGAGATCGTGCAGGACCCTTCGAACCGGGGCTCAGTGTGTT
GGATGAGCGGACACGACAGAAAACGTGCCGAGAGTGTGGCAGCTTAGAAA
TCGACTGGAAATGGGAAGAAGCGCTCCGGTGCTGTGTCTGCCATGCTTGC
AAGGATAAATTTCCGGAGAAATACAGTCTACTTACCAAGACCGAGGCACG
AGAGGACTACCTCCTGACCAATCCCGAACTTCAGGATGAGGAACTCCTCC
CACACCTGGAGCGCCCGAATCCGCATAAATCAACGTGGAATAACATGATG
CTGTACCTACGGTATCAGGTCGAAGAGTACGCCTTTTCCGCCAAGAAATG
GGGCTCACCCGAAGCCTTGGACGCGGAGTTTGAGCGACGCGAGAATGAGA
AGAAGCGCCGGCGGGAGGTCAAATTCAAGAGCAAACTTGAAGACCTTAAG
AAGCGTACGCGAGTCGATGCATACCGACGTAGCCGGCAAGGAGCGACCGG
TGGTAATTTTGGAGATGACCTGGGGGGTGGTGGACGACATGTACATCAGT
GGGGAAGATCGGTCGAAGATCCCAAGACGGGGATTGGGGTCAAGAAATGC
GTTGACTGCGGGATGGAAGTCGAAGAACTCGAGTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002683CBS51388_002683Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002683-T1.exon1CBS51388_002683-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002683-T1.exon2CBS51388_002683-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002683-T1.exon3CBS51388_002683-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002683-T1.cdsCBS51388_002683-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002683-T1CBS51388_002683-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092641G3
DBxrefInterPro:IPR009061
DBxrefInterPro:IPR000465
DBxrefInterPro:IPR037129
DBxrefInterPro:IPR022656
DBxrefPFAM:PF05181
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:793192..794433 +
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