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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:806643..808406- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002687-T1 ID=CBS51388_002687-T1|Name=CBS51388_002687-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1764bp|location=Sequence derived from alignment at An03:806643..808406- (Aspergillus niger CBS 513.88)
ATGAACAACGACCAATTCCGCCGCCTCGTCCTCGACAACCCTTCCTCCAA
ACCCGCCAAATCCACCAGCCCAGATGCATCTTCTCCATCCCAACAGCAAC
CACGCAAAAGCATTGGCAATGCGACACCCGCAGCCGGCGCACTGGGCTCG
CGCCTTCGCTCCAGCATCCCCATGACACCGTGAGCTGATTCTCTTCCTGT
CCCTCAACCCCACTTGCGCTCTTGACCCTTAGTTTACACGATTGATATCA
CTAACCACGTCTCTTTTCGTCGCAGCCGCTCCATAACAAATGTCGACTTT
GCGCGCCAACTAGCCGAATACCGCCGCGAAGCCCAACCCGCTTCCAAGAA
ATTCAAATCCTCCGCCGCCCCCAAGGGAACGAGATTACCGTCCGGTTATC
AAGATCGGGCTGCGCTGTTGCGTCAGAAGGAAGCAGCAGAGGAAGGCGAT
AGTGCTGATGATGGATCGAATCTGGAGAAGCGCGTCAAGGCGTTGGAGGA
GATGGTCAAACTAGGACAGATTGACCAGGCGACGTTTGAGAAGCTACGTG
CCGAGATGGGGGTGGGTGGGGACCTGAAAAGTACGCATATGGTGAAAGGC
TTGGATTGGGAGTTGCTGAGGAGGGTTAAGGGGGGTGAGGATGTCGATGT
CTTGGAGAAGGAAGGGGAGAAGGGTGAGGGAAAGGAGGAAGAAGATGTAG
CAGATGTGGATGAGGAGCTGGATCGGGTGTTGGGAGAAAAGGGTGAGGGG
GTGAATGCATTGTCTGCTGCCCCGAATGAAAATAAGGAGAAAAAGAAGAA
GGGGGTGATGGTGCAGAGAAAGTCGAGAGATGAGATCCTCAGGGAGTTGA
AGGCCAGTCGTGCTGCTGCTGCGGCTGAGGCGGCGAAGCCGGCTGAGCCC
GCCTTAGGAACTAAGTTTAGGAGGATCGGGGGAGAGTCCAAGGCGGAGAA
GAAGCGATGGGTGGAGCAGGATGAGAATGGGCGGCGCAAGGAGATTCTAC
AGATCACAGACGCGGAGGGCAGGACAAAGAGGAAGGTGAGATGGCTAGAC
AAGCCTGGTGAGGTTGGTGGTGGCGATGGGCCTGCTGGATTATTGATGCC
GGACAAGGATGCGAAGCCGCTGGGCATGGAAATTCCAGCAGAGGTTGCAT
CCAAGGCTTCTGCGCCGGCGGAGCACGACGACGACGATGATATTTTTGCT
GGCGTCGGAGATGACTATAACCCGCTTGGTGATCTACCGGATGATGACGA
TTCGTCAGATGAGAGTGAGGATGGCGAGAAGCCACCAAGGGCCACGGAAC
CAGCTCCTGCTGCCGGTGATCCGAAGAAACCGGAGGCGACAACAAGCCGG
CCTCGAAATTACTTTTCTACGTCTACAACGGATGAGGTTCCTGAGATAGA
CCGGTCGAACCCGTTAGCGAAGGATCCTACGCTACTAGCGGCCCTGAAAC
GGGCTGCTGCGTTACGACAATCCGAGGAGGCTGGTGCTACTAATGCTGAT
GCTGGAGATGTCGACGACGAGACGGCGCTTCGACGAAGGAAGTTTCTGGA
GGAGGCGCGTCGGCGGGAAGCTTTGGATGCGATGGATATGGATATGGGCT
TTGGGGGGAGCCGCAACGATGACGACGAGGAGGACGAGGAGGTGGTGCTG
GAGACCGAGGGACGCGGCGGGAAGAAGAGGAAACGAGGGCCGAAGAAGAA
GAAGGGCGACAAGGACAGTGTGACGGATGTGATGCGCGTGCTAGAAGGGA
GGAAAAAGGAGTGA back to topCoding sequence (CDS) from alignment at An03:806643..808406- >CBS51388_002687-T1 ID=CBS51388_002687-T1|Name=CBS51388_002687-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3336bp|location=Sequence derived from alignment at An03:806643..808406- (Aspergillus niger CBS 513.88)
CCGCTCCATAACAAATGTCGACTTTGCGCGCCAACTAGCCGAATACCGCC
GCGAAGCCCAACCCGCTTCCAAGAAATTCAAATCCTCCGCCGCCCCCAAG
GGAACGAGATTACCGTCCGGTTATCAAGATCGGGCTGCGCTGTTGCGTCA
GAAGGAAGCAGCAGAGGAAGGCGATAGTGCTGATGATGGATCGAATCTGG
AGAAGCGCGTCAAGGCGTTGGAGGAGATGGTCAAACTAGGACAGATTGAC
CAGGCGACGTTTGAGAAGCTACGTGCCGAGATGGGGGTGGGTGGGGACCT
GAAAAGTACGCATATGGTGAAAGGCTTGGATTGGGAGTTGCTGAGGAGGG
TTAAGGGGGGTGAGGATGTCGATGTCTTGGAGAAGGAAGGGGAGAAGGGT
GAGGGAAAGGAGGAAGAAGATGTAGCAGATGTGGATGAGGAGCTGGATCG
GGTGTTGGGAGAAAAGGGTGAGGGGGTGAATGCATTGTCTGCTGCCCCGA
ATGAAAATAAGGAGAAAAAGAAGAAGGGGGTGATGGTGCAGAGAAAGTCG
AGAGATGAGATCCTCAGGGAGTTGAAGGCCAGTCGTGCTGCTGCTGCGGC
TGAGGCGGCGAAGCCGGCTGAGCCCGCCTTAGGAACTAAGTTTAGGAGGA
TCGGGGGAGAGTCCAAGGCGGAGAAGAAGCGATGGGTGGAGCAGGATGAG
AATGGGCGGCGCAAGGAGATTCTACAGATCACAGACGCGGAGGGCAGGAC
AAAGAGGAAGGTGAGATGGCTAGACAAGCCTGGTGAGGTTGGTGGTGGCG
ATGGGCCTGCTGGATTATTGATGCCGGACAAGGATGCGAAGCCGCTGGGC
ATGGAAATTCCAGCAGAGGTTGCATCCAAGGCTTCTGCGCCGGCGGAGCA
CGACGACGACGATGATATTTTTGCTGGCGTCGGAGATGACTATAACCCGC
TTGGTGATCTACCGGATGATGACGATTCGTCAGATGAGAGTGAGGATGGC
GAGAAGCCACCAAGGGCCACGGAACCAGCTCCTGCTGCCGGTGATCCGAA
GAAACCGGAGGCGACAACAAGCCGGCCTCGAAATTACTTTTCTACGTCTA
CAACGGATGAGGTTCCTGAGATAGACCGGTCGAACCCGTTAGCGAAGGAT
CCTACGCTACTAGCGGCCCTGAAACGGGCTGCTGCGTTACGACAATCCGA
GGAGGCTGGTGCTACTAATGCTGATGCTGGAGATGTCGACGACGAGACGG
CGCTTCGACGAAGGAAGTTTCTGGAGGAGGCGCGTCGGCGGGAAGCTTTG
GATGCGATGGATATGGATATGGGCTTTGGGGGGAGCCGCAACGATGACGA
CGAGGAGGACGAGGAGGTGGTGCTGGAGACCGAGGGACGCGGCGGGAAGA
AGAGGAAACGAGGGCCGAAGAAGAAGAAGGGCGACAAGGACAGTGTGACG
GATGTGATGCGCGTGCTAGAAGGGAGGAAAAAGGAGTGAATGAACAACGA
CCAATTCCGCCGCCTCGTCCTCGACAACCCTTCCTCCAAACCCGCCAAAT
CCACCAGCCCAGATGCATCTTCTCCATCCCAACAGCAACCACGCAAAAGC
ATTGGCAATGCGACACCCGCAGCCGGCGCACTGGGCTCGCGCCTTCGCTC
CAGCATCCCCATGACACCCCGCTCCATAACAAATGTCGACTTTGCGCGCC
AACTAGCCGAATACCGCCGCGAAGCCCAACCCGCTTCCAAGAAATTCAAA
TCCTCCGCCGCCCCCAAGGGAACGAGATTACCGTCCGGTTATCAAGATCG
GGCTGCGCTGTTGCGTCAGAAGGAAGCAGCAGAGGAAGGCGATAGTGCTG
ATGATGGATCGAATCTGGAGAAGCGCGTCAAGGCGTTGGAGGAGATGGTC
AAACTAGGACAGATTGACCAGGCGACGTTTGAGAAGCTACGTGCCGAGAT
GGGGGTGGGTGGGGACCTGAAAAGTACGCATATGGTGAAAGGCTTGGATT
GGGAGTTGCTGAGGAGGGTTAAGGGGGGTGAGGATGTCGATGTCTTGGAG
AAGGAAGGGGAGAAGGGTGAGGGAAAGGAGGAAGAAGATGTAGCAGATGT
GGATGAGGAGCTGGATCGGGTGTTGGGAGAAAAGGGTGAGGGGGTGAATG
CATTGTCTGCTGCCCCGAATGAAAATAAGGAGAAAAAGAAGAAGGGGGTG
ATGGTGCAGAGAAAGTCGAGAGATGAGATCCTCAGGGAGTTGAAGGCCAG
TCGTGCTGCTGCTGCGGCTGAGGCGGCGAAGCCGGCTGAGCCCGCCTTAG
GAACTAAGTTTAGGAGGATCGGGGGAGAGTCCAAGGCGGAGAAGAAGCGA
TGGGTGGAGCAGGATGAGAATGGGCGGCGCAAGGAGATTCTACAGATCAC
AGACGCGGAGGGCAGGACAAAGAGGAAGGTGAGATGGCTAGACAAGCCTG
GTGAGGTTGGTGGTGGCGATGGGCCTGCTGGATTATTGATGCCGGACAAG
GATGCGAAGCCGCTGGGCATGGAAATTCCAGCAGAGGTTGCATCCAAGGC
TTCTGCGCCGGCGGAGCACGACGACGACGATGATATTTTTGCTGGCGTCG
GAGATGACTATAACCCGCTTGGTGATCTACCGGATGATGACGATTCGTCA
GATGAGAGTGAGGATGGCGAGAAGCCACCAAGGGCCACGGAACCAGCTCC
TGCTGCCGGTGATCCGAAGAAACCGGAGGCGACAACAAGCCGGCCTCGAA
ATTACTTTTCTACGTCTACAACGGATGAGGTTCCTGAGATAGACCGGTCG
AACCCGTTAGCGAAGGATCCTACGCTACTAGCGGCCCTGAAACGGGCTGC
TGCGTTACGACAATCCGAGGAGGCTGGTGCTACTAATGCTGATGCTGGAG
ATGTCGACGACGAGACGGCGCTTCGACGAAGGAAGTTTCTGGAGGAGGCG
CGTCGGCGGGAAGCTTTGGATGCGATGGATATGGATATGGGCTTTGGGGG
GAGCCGCAACGATGACGACGAGGAGGACGAGGAGGTGGTGCTGGAGACCG
AGGGACGCGGCGGGAAGAAGAGGAAACGAGGGCCGAAGAAGAAGAAGGGC
GACAAGGACAGTGTGACGGATGTGATGCGCGTGCTAGAAGGGAGGAAAAA
GGAGTGAATGAACAACGACCAATTCCGCCGCCTCGTCCTCGACAACCCTT
CCTCCAAACCCGCCAAATCCACCAGCCCAGATGCATCTTCTCCATCCCAA
CAGCAACCACGCAAAAGCATTGGCAATGCGACACCCGCAGCCGGCGCACT
GGGCTCGCGCCTTCGCTCCAGCATCCCCATGACACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012916 |
| DBxref | PFAM:PF07808 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:806643..808406 - |
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