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CBS51388_002707-T1, CBS51388_002707-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002707-T1
Unique NameCBS51388_002707-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:899854..901320-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002707-T1 ID=CBS51388_002707-T1|Name=CBS51388_002707-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1467bp|location=Sequence derived from alignment at An03:899854..901320- (Aspergillus niger CBS 513.88)
ATGCTCTCTGGTATCCTCATTTTCAACCAAAAGGGCGAGAACCTAATTTT
CCGCGCTTTCCGCAGCGACTGCCGCCCGCGCCTCGCCGACATCTTCCGCA
TCCAGGTCATCTCCAACCCTCAGGTCCGCTCGCCCATCCTCACCCTAGGC
TCCACGACTTTCAGTCATGTCAAACACGAGAACATCTACCTGGTCGCCGT
GACTAAGAGCAATGCCAATGCCGCGCTGGTCTTCGAATTCCTATACCGAC
TGGTTATGCTGGGAAAGAGCTATTTTGGGAAGCTCGATGAGGAGGCCGTG
AAGAACAACTTTGTCCTAATTTACGAATTGCTCGACGGTGCGCCTCACCT
GTGCTTTCGAGCATACAACCCACCTGAAAGATTGCTAAACCGCATTTGCC
TCTTTGATAGAAATCCTGGACTTCGGATACCCTCAAAACACCGAGACGGA
CACCTTGAAAATGTACATCACCACCGAAGGCGTCAAATCCGCCATTGCCA
ATTCCGCGACCGACTCCAGCCGTATTACCATGCAAGCCACTGGCGCTCTC
TCCTGGCGCCGTTCCGATGTCAAATACCGCAAGAATGAGGCCTTTGTCGA
CGTGATTGAAGACGTCAACCTCCTCATGTCCGCCACAGGCACCGTCCTTC
GCGCCGATGTCAACGGCCAAATCGTCATGCGAGCTTACCTCTCCGGCACC
CCAGAGTGCAAATTCGGCCTTAATGACCGCTTACTCCTCGATACCGACGC
TGCCGGCTCCTCCACCCCAGGCAACCGCGACGGCACGATGAAGGCTACCC
GCGCGGCCGCGGGCTCTGTCACCCTCGAAGACTGCCAATTTCACCAGTGC
GTCAAGCTGGGCCGCTTCGACGCCGATCGGATTATCTCCTTTGTGCCTCC
CGATGGCGAGTTTGAGCTCATGCGCTACCGCGCTACCGAAAACGTGAATT
TGCCCTTCAAGGTTCATCCGATTGTGCGTGAAGTCGGCACCACCAAAGTG
GAATACAGCGTCGCTATTAAAGCAAACTACAGCTCGAAATTATTCGCGAC
AAACGTTGTGATTCGCATTCCAACACCGCTGAACACCGCCAAGACGACGG
AACGGACCAGCCAGGGTCGGGCAAAGTACGAGCCGGAACATAATAACATT
GTGTGGAAGATTGCGCGGTTTTCCGGTGGAAGCGAATACGTCCTGACAGC
AGAAGCGACGTTGACGAGCATGACACACCAGAAGGCGTGGAGTCGGCCAC
CGCTCAGTCTATCATTCAGTCTTCTCATGTTCACCAGCAGTGGATTACTG
GTGCGGTACCTGAAGGTATTTGAGAAGAGCAACTATAGCAGTGTGAAGTG
GGTGCGGTACATGACTCGCGCGGGCAGTTATGAAATTCGGTACGTTTAAT
GCGAACTCCTTGCCTGAATTATTGTGGGGGTGACTGCTGTGCTAACTCCA
AGCGAAACAGATTCTAG
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Coding sequence (CDS) from alignment at An03:899854..901320-

>CBS51388_002707-T1 ID=CBS51388_002707-T1|Name=CBS51388_002707-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3969bp|location=Sequence derived from alignment at An03:899854..901320- (Aspergillus niger CBS 513.88)
ATTCTAGAAATCCTGGACTTCGGATACCCTCAAAACACCGAGACGGACAC
CTTGAAAATGTACATCACCACCGAAGGCGTCAAATCCGCCATTGCCAATT
CCGCGACCGACTCCAGCCGTATTACCATGCAAGCCACTGGCGCTCTCTCC
TGGCGCCGTTCCGATGTCAAATACCGCAAGAATGAGGCCTTTGTCGACGT
GATTGAAGACGTCAACCTCCTCATGTCCGCCACAGGCACCGTCCTTCGCG
CCGATGTCAACGGCCAAATCGTCATGCGAGCTTACCTCTCCGGCACCCCA
GAGTGCAAATTCGGCCTTAATGACCGCTTACTCCTCGATACCGACGCTGC
CGGCTCCTCCACCCCAGGCAACCGCGACGGCACGATGAAGGCTACCCGCG
CGGCCGCGGGCTCTGTCACCCTCGAAGACTGCCAATTTCACCAGTGCGTC
AAGCTGGGCCGCTTCGACGCCGATCGGATTATCTCCTTTGTGCCTCCCGA
TGGCGAGTTTGAGCTCATGCGCTACCGCGCTACCGAAAACGTGAATTTGC
CCTTCAAGGTTCATCCGATTGTGCGTGAAGTCGGCACCACCAAAGTGGAA
TACAGCGTCGCTATTAAAGCAAACTACAGCTCGAAATTATTCGCGACAAA
CGTTGTGATTCGCATTCCAACACCGCTGAACACCGCCAAGACGACGGAAC
GGACCAGCCAGGGTCGGGCAAAGTACGAGCCGGAACATAATAACATTGTG
TGGAAGATTGCGCGGTTTTCCGGTGGAAGCGAATACGTCCTGACAGCAGA
AGCGACGTTGACGAGCATGACACACCAGAAGGCGTGGAGTCGGCCACCGC
TCAGTCTATCATTCAGTCTTCTCATGTTCACCAGCAGTGGATTACTGGTG
CGGTACCTGAAGGTATTTGAGAAGAGCAACTATAGCAGTGTGAAGTGGGT
GCGGTACATGACTCGCGCGGGCAGTTATGAAATTCGATGCTCTCTGGTAT
CCTCATTTTCAACCAAAAGGGCGAGAACCTAATTTTCCGCGCTTTCCGCA
GCGACTGCCGCCCGCGCCTCGCCGACATCTTCCGCATCCAGGTCATCTCC
AACCCTCAGGTCCGCTCGCCCATCCTCACCCTAGGCTCCACGACTTTCAG
TCATGTCAAACACGAGAACATCTACCTGGTCGCCGTGACTAAGAGCAATG
CCAATGCCGCGCTGGTCTTCGAATTCCTATACCGACTGGTTATGCTGGGA
AAGAGCTATTTTGGGAAGCTCGATGAGGAGGCCGTGAAGAACAACTTTGT
CCTAATTTACGAATTGCTCGACGATTCTAGAAATCCTGGACTTCGGATAC
CCTCAAAACACCGAGACGGACACCTTGAAAATGTACATCACCACCGAAGG
CGTCAAATCCGCCATTGCCAATTCCGCGACCGACTCCAGCCGTATTACCA
TGCAAGCCACTGGCGCTCTCTCCTGGCGCCGTTCCGATGTCAAATACCGC
AAGAATGAGGCCTTTGTCGACGTGATTGAAGACGTCAACCTCCTCATGTC
CGCCACAGGCACCGTCCTTCGCGCCGATGTCAACGGCCAAATCGTCATGC
GAGCTTACCTCTCCGGCACCCCAGAGTGCAAATTCGGCCTTAATGACCGC
TTACTCCTCGATACCGACGCTGCCGGCTCCTCCACCCCAGGCAACCGCGA
CGGCACGATGAAGGCTACCCGCGCGGCCGCGGGCTCTGTCACCCTCGAAG
ACTGCCAATTTCACCAGTGCGTCAAGCTGGGCCGCTTCGACGCCGATCGG
ATTATCTCCTTTGTGCCTCCCGATGGCGAGTTTGAGCTCATGCGCTACCG
CGCTACCGAAAACGTGAATTTGCCCTTCAAGGTTCATCCGATTGTGCGTG
AAGTCGGCACCACCAAAGTGGAATACAGCGTCGCTATTAAAGCAAACTAC
AGCTCGAAATTATTCGCGACAAACGTTGTGATTCGCATTCCAACACCGCT
GAACACCGCCAAGACGACGGAACGGACCAGCCAGGGTCGGGCAAAGTACG
AGCCGGAACATAATAACATTGTGTGGAAGATTGCGCGGTTTTCCGGTGGA
AGCGAATACGTCCTGACAGCAGAAGCGACGTTGACGAGCATGACACACCA
GAAGGCGTGGAGTCGGCCACCGCTCAGTCTATCATTCAGTCTTCTCATGT
TCACCAGCAGTGGATTACTGGTGCGGTACCTGAAGGTATTTGAGAAGAGC
AACTATAGCAGTGTGAAGTGGGTGCGGTACATGACTCGCGCGGGCAGTTA
TGAAATTCGATGCTCTCTGGTATCCTCATTTTCAACCAAAAGGGCGAGAA
CCTAATTTTCCGCGCTTTCCGCAGCGACTGCCGCCCGCGCCTCGCCGACA
TCTTCCGCATCCAGGTCATCTCCAACCCTCAGGTCCGCTCGCCCATCCTC
ACCCTAGGCTCCACGACTTTCAGTCATGTCAAACACGAGAACATCTACCT
GGTCGCCGTGACTAAGAGCAATGCCAATGCCGCGCTGGTCTTCGAATTCC
TATACCGACTGGTTATGCTGGGAAAGAGCTATTTTGGGAAGCTCGATGAG
GAGGCCGTGAAGAACAACTTTGTCCTAATTTACGAATTGCTCGACGATTC
TAGAAATCCTGGACTTCGGATACCCTCAAAACACCGAGACGGACACCTTG
AAAATGTACATCACCACCGAAGGCGTCAAATCCGCCATTGCCAATTCCGC
GACCGACTCCAGCCGTATTACCATGCAAGCCACTGGCGCTCTCTCCTGGC
GCCGTTCCGATGTCAAATACCGCAAGAATGAGGCCTTTGTCGACGTGATT
GAAGACGTCAACCTCCTCATGTCCGCCACAGGCACCGTCCTTCGCGCCGA
TGTCAACGGCCAAATCGTCATGCGAGCTTACCTCTCCGGCACCCCAGAGT
GCAAATTCGGCCTTAATGACCGCTTACTCCTCGATACCGACGCTGCCGGC
TCCTCCACCCCAGGCAACCGCGACGGCACGATGAAGGCTACCCGCGCGGC
CGCGGGCTCTGTCACCCTCGAAGACTGCCAATTTCACCAGTGCGTCAAGC
TGGGCCGCTTCGACGCCGATCGGATTATCTCCTTTGTGCCTCCCGATGGC
GAGTTTGAGCTCATGCGCTACCGCGCTACCGAAAACGTGAATTTGCCCTT
CAAGGTTCATCCGATTGTGCGTGAAGTCGGCACCACCAAAGTGGAATACA
GCGTCGCTATTAAAGCAAACTACAGCTCGAAATTATTCGCGACAAACGTT
GTGATTCGCATTCCAACACCGCTGAACACCGCCAAGACGACGGAACGGAC
CAGCCAGGGTCGGGCAAAGTACGAGCCGGAACATAATAACATTGTGTGGA
AGATTGCGCGGTTTTCCGGTGGAAGCGAATACGTCCTGACAGCAGAAGCG
ACGTTGACGAGCATGACACACCAGAAGGCGTGGAGTCGGCCACCGCTCAG
TCTATCATTCAGTCTTCTCATGTTCACCAGCAGTGGATTACTGGTGCGGT
ACCTGAAGGTATTTGAGAAGAGCAACTATAGCAGTGTGAAGTGGGTGCGG
TACATGACTCGCGCGGGCAGTTATGAAATTCGATGCTCTCTGGTATCCTC
ATTTTCAACCAAAAGGGCGAGAACCTAATTTTCCGCGCTTTCCGCAGCGA
CTGCCGCCCGCGCCTCGCCGACATCTTCCGCATCCAGGTCATCTCCAACC
CTCAGGTCCGCTCGCCCATCCTCACCCTAGGCTCCACGACTTTCAGTCAT
GTCAAACACGAGAACATCTACCTGGTCGCCGTGACTAAGAGCAATGCCAA
TGCCGCGCTGGTCTTCGAATTCCTATACCGACTGGTTATGCTGGGAAAGA
GCTATTTTGGGAAGCTCGATGAGGAGGCCGTGAAGAACAACTTTGTCCTA
ATTTACGAATTGCTCGACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030131clathrin adaptor complex
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002707CBS51388_002707Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002707-T1CBS51388_002707-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002707-T1.cdsCBS51388_002707-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002707-T1.exon3CBS51388_002707-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002707-T1.exon2CBS51388_002707-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002707-T1.exon1CBS51388_002707-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036168
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR043512
DBxrefInterPro:IPR022775
DBxrefInterPro:IPR028565
DBxrefInterPro:IPR001392
DBxrefPFAM:PF01217
DBxrefPFAM:PF00928
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:899854..901320 -
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