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CBS51388_002711-T1, CBS51388_002711-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002711-T1
Unique NameCBS51388_002711-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:913388..915033-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002711-T1 ID=CBS51388_002711-T1|Name=CBS51388_002711-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1646bp|location=Sequence derived from alignment at An03:913388..915033- (Aspergillus niger CBS 513.88)
ATGAAGTATCGATGCCTCGCCTCTTTGGGCATTGCTGCCCTGGGTGCCGC
TGCGACGGTCTCTGCCAACCCACTGCTGAACCGCGAAGCTGAAGGTCAAT
GCCCCCAAGGCTACACCCAGAGCGTCTACTACAAGACTATCACCCTCCAG
CCCTCCTCGACTGCGTCAACTGCGCCAACCTCTACGCTCGCCAGTGCAGG
TGAAGGCCAATGTCCCGTTGGTTACACCCAGAGCGTCTACTACAAGACGA
TCCCTCTCCAGCCTACTTCAACTGCATCCGTCGAGCCAACTTCTGCTCCC
GCTGTTGAGCCAACCTCGACCCCTGCTGTCGAGTCGAGCTCTACCTCGAT
TGATCAGGTTACTACTCTGCACTCGTCTTCCACCGTTATCGTGACTGAGG
TCGTGACTGCAACCCCTGCGGTCGCCACCACGAGCTCCGCGGTCGAGAGC
GCTGCACCAGTTGCCACCACCCCCTCCGCTGCCGAAGCTTCCCCTGCTGC
TGAGACTAGCACTGCTGTGGAGGCTACCTCTTCTTCCTCTTCCTCGGTCG
TTGAGGTGACGACCAATGCTGCTGCCAATGCCGCCGCAACTACTGCTGCC
GCTCAGCCTACCCCTGAGGCTGTTACCACTGAGGTTGCAACTACTGAAGC
TGCCGCGACCACCGAAGCAGCTGCCCAGCCTAGCCCTGAAGCCGCTACCA
CCGAGGCTGTTACTACCCAGGCTGCTGCTGCCGCTGCTACCACCGAAGCT
GCCACTACCCAGGAGGCTGCTGCTGCTGCTACCACTGAAGCCGTTGTTCA
GTCTACCGCTGAGGCCGCTACTACTGAGGCCGCCACTACCGAAGCTGCTG
CTGCTACCCAGGCCGCCGCCACTACTGTCGAATCCAAGTCTACTTCTACT
AGCTCGACCGCTGCTAGCGCCGCGACCTCGTCTGCCTCCAGCTCCAGCTC
TTCCACCTCTAGTGCCCTGAGTTCCGAGTACTCGGGTGAAGCAACTTTCT
ACGGCGGTAACGTCTCGGGCGGAACCTGCTCGTTCACCGAGTACACCATC
CCCTCTGGCCTCTTTGGCACGGCCCTCTCCTCCCAACGCTGGGACAACGC
AGCCGAATGTGGTGCCTGTGTCGAGGTCACTGGCCCTAGCGGTACCAAGA
TCAAGGCCATGGTAAGTCTTATCTCCTAAGCACTTCCCTACGCGCTTTTG
TTCCTTTCTTCCTGTCTCTAACAAACATCAAGGTTGTCGACGAATGTCCC
GAATGCGACTCCAACCACCTCGATCTCTTTGAGAGCGCCTTCTCTGAACT
GGCCGACATCTCTAAGGGCGTTATCAGCATCGACTGGGAGTACGTTGCCT
GCGGTATCACCTCCCCGATCGAACTGGTCAACAAGAGCGGCACCTCCGCC
TACTGGTTCGCCATGCAGGTAGTCAACTCCAACCTGCCCGTCACCAAGCT
CGAGGTCAGCACCGACAGCGGTAGCACCTGGCAATCTACCACCCGTTCCT
CCTACAATTACTTCGAGAACCAGAGCGGTTTCGGTACTGACACCGTTGAT
GTCCGTGTCACTGCCGAGGGTGGTTCTCAGATTACCGTCAAGAACGTCAG
CGTCTCGTCTGGCTCGTCTGTCACTGCTTCCTCCAACTTCGAGTAA
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Coding sequence (CDS) from alignment at An03:913388..915033-

>CBS51388_002711-T1 ID=CBS51388_002711-T1|Name=CBS51388_002711-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3150bp|location=Sequence derived from alignment at An03:913388..915033- (Aspergillus niger CBS 513.88)
GTTGTCGACGAATGTCCCGAATGCGACTCCAACCACCTCGATCTCTTTGA
GAGCGCCTTCTCTGAACTGGCCGACATCTCTAAGGGCGTTATCAGCATCG
ACTGGGAGTACGTTGCCTGCGGTATCACCTCCCCGATCGAACTGGTCAAC
AAGAGCGGCACCTCCGCCTACTGGTTCGCCATGCAGGTAGTCAACTCCAA
CCTGCCCGTCACCAAGCTCGAGGTCAGCACCGACAGCGGTAGCACCTGGC
AATCTACCACCCGTTCCTCCTACAATTACTTCGAGAACCAGAGCGGTTTC
GGTACTGACACCGTTGATGTCCGTGTCACTGCCGAGGGTGGTTCTCAGAT
TACCGTCAAGAACGTCAGCGTCTCGTCTGGCTCGTCTGTCACTGCTTCCT
CCAACTTCGAGTAAATGAAGTATCGATGCCTCGCCTCTTTGGGCATTGCT
GCCCTGGGTGCCGCTGCGACGGTCTCTGCCAACCCACTGCTGAACCGCGA
AGCTGAAGGTCAATGCCCCCAAGGCTACACCCAGAGCGTCTACTACAAGA
CTATCACCCTCCAGCCCTCCTCGACTGCGTCAACTGCGCCAACCTCTACG
CTCGCCAGTGCAGGTGAAGGCCAATGTCCCGTTGGTTACACCCAGAGCGT
CTACTACAAGACGATCCCTCTCCAGCCTACTTCAACTGCATCCGTCGAGC
CAACTTCTGCTCCCGCTGTTGAGCCAACCTCGACCCCTGCTGTCGAGTCG
AGCTCTACCTCGATTGATCAGGTTACTACTCTGCACTCGTCTTCCACCGT
TATCGTGACTGAGGTCGTGACTGCAACCCCTGCGGTCGCCACCACGAGCT
CCGCGGTCGAGAGCGCTGCACCAGTTGCCACCACCCCCTCCGCTGCCGAA
GCTTCCCCTGCTGCTGAGACTAGCACTGCTGTGGAGGCTACCTCTTCTTC
CTCTTCCTCGGTCGTTGAGGTGACGACCAATGCTGCTGCCAATGCCGCCG
CAACTACTGCTGCCGCTCAGCCTACCCCTGAGGCTGTTACCACTGAGGTT
GCAACTACTGAAGCTGCCGCGACCACCGAAGCAGCTGCCCAGCCTAGCCC
TGAAGCCGCTACCACCGAGGCTGTTACTACCCAGGCTGCTGCTGCCGCTG
CTACCACCGAAGCTGCCACTACCCAGGAGGCTGCTGCTGCTGCTACCACT
GAAGCCGTTGTTCAGTCTACCGCTGAGGCCGCTACTACTGAGGCCGCCAC
TACCGAAGCTGCTGCTGCTACCCAGGCCGCCGCCACTACTGTCGAATCCA
AGTCTACTTCTACTAGCTCGACCGCTGCTAGCGCCGCGACCTCGTCTGCC
TCCAGCTCCAGCTCTTCCACCTCTAGTGCCCTGAGTTCCGAGTACTCGGG
TGAAGCAACTTTCTACGGCGGTAACGTCTCGGGCGGAACCTGCTCGTTCA
CCGAGTACACCATCCCCTCTGGCCTCTTTGGCACGGCCCTCTCCTCCCAA
CGCTGGGACAACGCAGCCGAATGTGGTGCCTGTGTCGAGGTCACTGGCCC
TAGCGGTACCAAGATCAAGGCCATGGTTGTCGACGAATGTCCCGAATGCG
ACTCCAACCACCTCGATCTCTTTGAGAGCGCCTTCTCTGAACTGGCCGAC
ATCTCTAAGGGCGTTATCAGCATCGACTGGGAGTACGTTGCCTGCGGTAT
CACCTCCCCGATCGAACTGGTCAACAAGAGCGGCACCTCCGCCTACTGGT
TCGCCATGCAGGTAGTCAACTCCAACCTGCCCGTCACCAAGCTCGAGGTC
AGCACCGACAGCGGTAGCACCTGGCAATCTACCACCCGTTCCTCCTACAA
TTACTTCGAGAACCAGAGCGGTTTCGGTACTGACACCGTTGATGTCCGTG
TCACTGCCGAGGGTGGTTCTCAGATTACCGTCAAGAACGTCAGCGTCTCG
TCTGGCTCGTCTGTCACTGCTTCCTCCAACTTCGAGTAAATGAAGTATCG
ATGCCTCGCCTCTTTGGGCATTGCTGCCCTGGGTGCCGCTGCGACGGTCT
CTGCCAACCCACTGCTGAACCGCGAAGCTGAAGGTCAATGCCCCCAAGGC
TACACCCAGAGCGTCTACTACAAGACTATCACCCTCCAGCCCTCCTCGAC
TGCGTCAACTGCGCCAACCTCTACGCTCGCCAGTGCAGGTGAAGGCCAAT
GTCCCGTTGGTTACACCCAGAGCGTCTACTACAAGACGATCCCTCTCCAG
CCTACTTCAACTGCATCCGTCGAGCCAACTTCTGCTCCCGCTGTTGAGCC
AACCTCGACCCCTGCTGTCGAGTCGAGCTCTACCTCGATTGATCAGGTTA
CTACTCTGCACTCGTCTTCCACCGTTATCGTGACTGAGGTCGTGACTGCA
ACCCCTGCGGTCGCCACCACGAGCTCCGCGGTCGAGAGCGCTGCACCAGT
TGCCACCACCCCCTCCGCTGCCGAAGCTTCCCCTGCTGCTGAGACTAGCA
CTGCTGTGGAGGCTACCTCTTCTTCCTCTTCCTCGGTCGTTGAGGTGACG
ACCAATGCTGCTGCCAATGCCGCCGCAACTACTGCTGCCGCTCAGCCTAC
CCCTGAGGCTGTTACCACTGAGGTTGCAACTACTGAAGCTGCCGCGACCA
CCGAAGCAGCTGCCCAGCCTAGCCCTGAAGCCGCTACCACCGAGGCTGTT
ACTACCCAGGCTGCTGCTGCCGCTGCTACCACCGAAGCTGCCACTACCCA
GGAGGCTGCTGCTGCTGCTACCACTGAAGCCGTTGTTCAGTCTACCGCTG
AGGCCGCTACTACTGAGGCCGCCACTACCGAAGCTGCTGCTGCTACCCAG
GCCGCCGCCACTACTGTCGAATCCAAGTCTACTTCTACTAGCTCGACCGC
TGCTAGCGCCGCGACCTCGTCTGCCTCCAGCTCCAGCTCTTCCACCTCTA
GTGCCCTGAGTTCCGAGTACTCGGGTGAAGCAACTTTCTACGGCGGTAAC
GTCTCGGGCGGAACCTGCTCGTTCACCGAGTACACCATCCCCTCTGGCCT
CTTTGGCACGGCCCTCTCCTCCCAACGCTGGGACAACGCAGCCGAATGTG
GTGCCTGTGTCGAGGTCACTGGCCCTAGCGGTACCAAGATCAAGGCCATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002711CBS51388_002711Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002711-T1CBS51388_002711-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002711-T1.cdsCBS51388_002711-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002711-T1.exon2CBS51388_002711-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002711-T1.exon1CBS51388_002711-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
NoteCAZy:CBM63
DBxrefInterPro:IPR007112
DBxrefInterPro:IPR036908
DBxrefInterPro:IPR036749
DBxrefInterPro:IPR009009
DBxrefPFAM:PF03330
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:913388..915033 -
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