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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:990251..991594- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002738-T1 ID=CBS51388_002738-T1|Name=CBS51388_002738-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1344bp|location=Sequence derived from alignment at An03:990251..991594- (Aspergillus niger CBS 513.88)
ATGGCGTCAGGTGCGATGGATGCAGTGGCTCATTTTTCGAAGCAAACGAC
TGTTGACACATTCCAGACATCCCCAAAGTTGTGCCGTTGACCTGCCACGG
ACACTCACGTCCCGTGCCGCATATCAACTTCTCATCCACTGTCGAGGATG
ATCAGTACTACCTAATCTCTGCCTGCAAAGGTGAATATCCTCAGATCTAC
GGTTATAATTTCCGTGCTAACATCCACCAGACAACAATCCCATGTTGCGT
GATGGTATAACAGGTGACTGGTGCGCGTTCCCCGCATTGCATACTCCGCA
CACCGCACATGCTTACCATAAATGCCATTCAGGATTGGAACCTTCCTCGG
CCACAAGGGCGCGGTATGGCAAGCCCGTCTCTCGACAGATGCGAATTTGG
CAGCAACCGCAGCTGCGGACTTCTCCGCGTGAGTACCTACCTACCCACCT
TCAACGCACATCGCCGTCGCATCTCACTGACCTGCGATTTCTCTCTCCAT
ACAACAGCAAAATCTGGGACACTCACACTGGCGAATGCAAACACACCCTC
CAGCACTCGCACATCTGTCGTGCAGTAGCGTTTCCCATCCAGCCTTCCCC
CCAGGTCGTCGCAACAGGTGGTTTCGAGAAGAAGCTCCGCATTTTCGACC
TCACTCGCAGTGGGGGCAGTAACAGCTCCTCACCGACAAGTGCCACCCCC
AACAACGACGCCAGTCCTTCCGCGGTAACAAGCTACGAGATTGGCCCCGG
GGTTCACGGCGGCACCATCAAATCGATTGTCTGGAATCAGGACTACAACA
TCCTTACGACCGCCGCGGAAGACCGCAAAATCAGATGGTGGGATCTTCGC
TCGCGCCACCCAGTCGTCGAATACGCCGTAGAAGGTACCATCGGGAGTTG
CGAACTTAATTCCCTCGCCGTCAGACCTAACGACGCCGGAATTCTTACCG
TCGCGGCCGGCAGATCCGTTTATCTATTCGACGGACTAAGCCCCGGTCGT
CTCCTGAAGAAGATCGATTTCCGCTATGAGGTCGCCAGTGCAGCGGTCAA
CAATGAAACAAGCAGGTTGGTCACAGGTAGTGCCGAGGATACCTGGGCGA
GAGTTTATGACGTCCGCACGGAGGAAGAGCTGGGTACGTTTCATCCCCAT
TTCAACCCCACATTATCCATTGCTGTTCACTTCGATGTGGCTAACAATCC
ACCGCAGAGGTTCAAAAAGGCCATCACGGCCCGATCTGGTCTGTCAGTTT
CTCGCCTGACGGCAAACTGTATGGTACAGGAAGCGAGGATGGAACGATCA
AGTTGTGGAAGGCTTGCAGGGAGCCGTATGGCCTCTGGCGGTGA back to topCoding sequence (CDS) from alignment at An03:990251..991594- >CBS51388_002738-T1 ID=CBS51388_002738-T1|Name=CBS51388_002738-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6138bp|location=Sequence derived from alignment at An03:990251..991594- (Aspergillus niger CBS 513.88)
AGGTTCAAAAAGGCCATCACGGCCCGATCTGGTCTGTCAGTTTCTCGCCT
GACGGCAAACTGTATGGTACAGGAAGCGAGGATGGAACGATCAAGTTGTG
GAAGGCTTGCAGGGAGCCGTATGGCCTCTGGCGGTGACAAAATCTGGGAC
ACTCACACTGGCGAATGCAAACACACCCTCCAGCACTCGCACATCTGTCG
TGCAGTAGCGTTTCCCATCCAGCCTTCCCCCCAGGTCGTCGCAACAGGTG
GTTTCGAGAAGAAGCTCCGCATTTTCGACCTCACTCGCAGTGGGGGCAGT
AACAGCTCCTCACCGACAAGTGCCACCCCCAACAACGACGCCAGTCCTTC
CGCGGTAACAAGCTACGAGATTGGCCCCGGGGTTCACGGCGGCACCATCA
AATCGATTGTCTGGAATCAGGACTACAACATCCTTACGACCGCCGCGGAA
GACCGCAAAATCAGATGGTGGGATCTTCGCTCGCGCCACCCAGTCGTCGA
ATACGCCGTAGAAGGTACCATCGGGAGTTGCGAACTTAATTCCCTCGCCG
TCAGACCTAACGACGCCGGAATTCTTACCGTCGCGGCCGGCAGATCCGTT
TATCTATTCGACGGACTAAGCCCCGGTCGTCTCCTGAAGAAGATCGATTT
CCGCTATGAGGTCGCCAGTGCAGCGGTCAACAATGAAACAAGCAGGTTGG
TCACAGGTAGTGCCGAGGATACCTGGGCGAGAGTTTATGACGTCCGCACG
GAGGAAGAGCTGGGATTGGAACCTTCCTCGGCCACAAGGGCGCGGTATGG
CAAGCCCGTCTCTCGACAGATGCGAATTTGGCAGCAACCGCAGCTGCGGA
CTTCTCCGCACAACAATCCCATGTTGCGTGATGGTATAACAGGTGACTGA
CATCCCCAAAGTTGTGCCGTTGACCTGCCACGGACACTCACGTCCCGTGC
CGCATATCAACTTCTCATCCACTGTCGAGGATGATCAGTACTACCTAATC
TCTGCCTGCAAAGATGGCGTCAGAGGTTCAAAAAGGCCATCACGGCCCGA
TCTGGTCTGTCAGTTTCTCGCCTGACGGCAAACTGTATGGTACAGGAAGC
GAGGATGGAACGATCAAGTTGTGGAAGGCTTGCAGGGAGCCGTATGGCCT
CTGGCGGTGACAAAATCTGGGACACTCACACTGGCGAATGCAAACACACC
CTCCAGCACTCGCACATCTGTCGTGCAGTAGCGTTTCCCATCCAGCCTTC
CCCCCAGGTCGTCGCAACAGGTGGTTTCGAGAAGAAGCTCCGCATTTTCG
ACCTCACTCGCAGTGGGGGCAGTAACAGCTCCTCACCGACAAGTGCCACC
CCCAACAACGACGCCAGTCCTTCCGCGGTAACAAGCTACGAGATTGGCCC
CGGGGTTCACGGCGGCACCATCAAATCGATTGTCTGGAATCAGGACTACA
ACATCCTTACGACCGCCGCGGAAGACCGCAAAATCAGATGGTGGGATCTT
CGCTCGCGCCACCCAGTCGTCGAATACGCCGTAGAAGGTACCATCGGGAG
TTGCGAACTTAATTCCCTCGCCGTCAGACCTAACGACGCCGGAATTCTTA
CCGTCGCGGCCGGCAGATCCGTTTATCTATTCGACGGACTAAGCCCCGGT
CGTCTCCTGAAGAAGATCGATTTCCGCTATGAGGTCGCCAGTGCAGCGGT
CAACAATGAAACAAGCAGGTTGGTCACAGGTAGTGCCGAGGATACCTGGG
CGAGAGTTTATGACGTCCGCACGGAGGAAGAGCTGGGATTGGAACCTTCC
TCGGCCACAAGGGCGCGGTATGGCAAGCCCGTCTCTCGACAGATGCGAAT
TTGGCAGCAACCGCAGCTGCGGACTTCTCCGCACAACAATCCCATGTTGC
GTGATGGTATAACAGGTGACTGACATCCCCAAAGTTGTGCCGTTGACCTG
CCACGGACACTCACGTCCCGTGCCGCATATCAACTTCTCATCCACTGTCG
AGGATGATCAGTACTACCTAATCTCTGCCTGCAAAGATGGCGTCAGAGGT
TCAAAAAGGCCATCACGGCCCGATCTGGTCTGTCAGTTTCTCGCCTGACG
GCAAACTGTATGGTACAGGAAGCGAGGATGGAACGATCAAGTTGTGGAAG
GCTTGCAGGGAGCCGTATGGCCTCTGGCGGTGACAAAATCTGGGACACTC
ACACTGGCGAATGCAAACACACCCTCCAGCACTCGCACATCTGTCGTGCA
GTAGCGTTTCCCATCCAGCCTTCCCCCCAGGTCGTCGCAACAGGTGGTTT
CGAGAAGAAGCTCCGCATTTTCGACCTCACTCGCAGTGGGGGCAGTAACA
GCTCCTCACCGACAAGTGCCACCCCCAACAACGACGCCAGTCCTTCCGCG
GTAACAAGCTACGAGATTGGCCCCGGGGTTCACGGCGGCACCATCAAATC
GATTGTCTGGAATCAGGACTACAACATCCTTACGACCGCCGCGGAAGACC
GCAAAATCAGATGGTGGGATCTTCGCTCGCGCCACCCAGTCGTCGAATAC
GCCGTAGAAGGTACCATCGGGAGTTGCGAACTTAATTCCCTCGCCGTCAG
ACCTAACGACGCCGGAATTCTTACCGTCGCGGCCGGCAGATCCGTTTATC
TATTCGACGGACTAAGCCCCGGTCGTCTCCTGAAGAAGATCGATTTCCGC
TATGAGGTCGCCAGTGCAGCGGTCAACAATGAAACAAGCAGGTTGGTCAC
AGGTAGTGCCGAGGATACCTGGGCGAGAGTTTATGACGTCCGCACGGAGG
AAGAGCTGGGATTGGAACCTTCCTCGGCCACAAGGGCGCGGTATGGCAAG
CCCGTCTCTCGACAGATGCGAATTTGGCAGCAACCGCAGCTGCGGACTTC
TCCGCACAACAATCCCATGTTGCGTGATGGTATAACAGGTGACTGACATC
CCCAAAGTTGTGCCGTTGACCTGCCACGGACACTCACGTCCCGTGCCGCA
TATCAACTTCTCATCCACTGTCGAGGATGATCAGTACTACCTAATCTCTG
CCTGCAAAGATGGCGTCAGAGGTTCAAAAAGGCCATCACGGCCCGATCTG
GTCTGTCAGTTTCTCGCCTGACGGCAAACTGTATGGTACAGGAAGCGAGG
ATGGAACGATCAAGTTGTGGAAGGCTTGCAGGGAGCCGTATGGCCTCTGG
CGGTGACAAAATCTGGGACACTCACACTGGCGAATGCAAACACACCCTCC
AGCACTCGCACATCTGTCGTGCAGTAGCGTTTCCCATCCAGCCTTCCCCC
CAGGTCGTCGCAACAGGTGGTTTCGAGAAGAAGCTCCGCATTTTCGACCT
CACTCGCAGTGGGGGCAGTAACAGCTCCTCACCGACAAGTGCCACCCCCA
ACAACGACGCCAGTCCTTCCGCGGTAACAAGCTACGAGATTGGCCCCGGG
GTTCACGGCGGCACCATCAAATCGATTGTCTGGAATCAGGACTACAACAT
CCTTACGACCGCCGCGGAAGACCGCAAAATCAGATGGTGGGATCTTCGCT
CGCGCCACCCAGTCGTCGAATACGCCGTAGAAGGTACCATCGGGAGTTGC
GAACTTAATTCCCTCGCCGTCAGACCTAACGACGCCGGAATTCTTACCGT
CGCGGCCGGCAGATCCGTTTATCTATTCGACGGACTAAGCCCCGGTCGTC
TCCTGAAGAAGATCGATTTCCGCTATGAGGTCGCCAGTGCAGCGGTCAAC
AATGAAACAAGCAGGTTGGTCACAGGTAGTGCCGAGGATACCTGGGCGAG
AGTTTATGACGTCCGCACGGAGGAAGAGCTGGGATTGGAACCTTCCTCGG
CCACAAGGGCGCGGTATGGCAAGCCCGTCTCTCGACAGATGCGAATTTGG
CAGCAACCGCAGCTGCGGACTTCTCCGCACAACAATCCCATGTTGCGTGA
TGGTATAACAGGTGACTGACATCCCCAAAGTTGTGCCGTTGACCTGCCAC
GGACACTCACGTCCCGTGCCGCATATCAACTTCTCATCCACTGTCGAGGA
TGATCAGTACTACCTAATCTCTGCCTGCAAAGATGGCGTCAGAGGTTCAA
AAAGGCCATCACGGCCCGATCTGGTCTGTCAGTTTCTCGCCTGACGGCAA
ACTGTATGGTACAGGAAGCGAGGATGGAACGATCAAGTTGTGGAAGGCTT
GCAGGGAGCCGTATGGCCTCTGGCGGTGACAAAATCTGGGACACTCACAC
TGGCGAATGCAAACACACCCTCCAGCACTCGCACATCTGTCGTGCAGTAG
CGTTTCCCATCCAGCCTTCCCCCCAGGTCGTCGCAACAGGTGGTTTCGAG
AAGAAGCTCCGCATTTTCGACCTCACTCGCAGTGGGGGCAGTAACAGCTC
CTCACCGACAAGTGCCACCCCCAACAACGACGCCAGTCCTTCCGCGGTAA
CAAGCTACGAGATTGGCCCCGGGGTTCACGGCGGCACCATCAAATCGATT
GTCTGGAATCAGGACTACAACATCCTTACGACCGCCGCGGAAGACCGCAA
AATCAGATGGTGGGATCTTCGCTCGCGCCACCCAGTCGTCGAATACGCCG
TAGAAGGTACCATCGGGAGTTGCGAACTTAATTCCCTCGCCGTCAGACCT
AACGACGCCGGAATTCTTACCGTCGCGGCCGGCAGATCCGTTTATCTATT
CGACGGACTAAGCCCCGGTCGTCTCCTGAAGAAGATCGATTTCCGCTATG
AGGTCGCCAGTGCAGCGGTCAACAATGAAACAAGCAGGTTGGTCACAGGT
AGTGCCGAGGATACCTGGGCGAGAGTTTATGACGTCCGCACGGAGGAAGA
GCTGGGATTGGAACCTTCCTCGGCCACAAGGGCGCGGTATGGCAAGCCCG
TCTCTCGACAGATGCGAATTTGGCAGCAACCGCAGCTGCGGACTTCTCCG
CACAACAATCCCATGTTGCGTGATGGTATAACAGGTGACTGACATCCCCA
AAGTTGTGCCGTTGACCTGCCACGGACACTCACGTCCCGTGCCGCATATC
AACTTCTCATCCACTGTCGAGGATGATCAGTACTACCTAATCTCTGCCTG
CAAAGATGGCGTCAGAGGTTCAAAAAGGCCATCACGGCCCGATCTGGTCT
GTCAGTTTCTCGCCTGACGGCAAACTGTATGGTACAGGAAGCGAGGATGG
AACGATCAAGTTGTGGAAGGCTTGCAGGGAGCCGTATGGCCTCTGGCGGT
GACAAAATCTGGGACACTCACACTGGCGAATGCAAACACACCCTCCAGCA
CTCGCACATCTGTCGTGCAGTAGCGTTTCCCATCCAGCCTTCCCCCCAGG
TCGTCGCAACAGGTGGTTTCGAGAAGAAGCTCCGCATTTTCGACCTCACT
CGCAGTGGGGGCAGTAACAGCTCCTCACCGACAAGTGCCACCCCCAACAA
CGACGCCAGTCCTTCCGCGGTAACAAGCTACGAGATTGGCCCCGGGGTTC
ACGGCGGCACCATCAAATCGATTGTCTGGAATCAGGACTACAACATCCTT
ACGACCGCCGCGGAAGACCGCAAAATCAGATGGTGGGATCTTCGCTCGCG
CCACCCAGTCGTCGAATACGCCGTAGAAGGTACCATCGGGAGTTGCGAAC
TTAATTCCCTCGCCGTCAGACCTAACGACGCCGGAATTCTTACCGTCGCG
GCCGGCAGATCCGTTTATCTATTCGACGGACTAAGCCCCGGTCGTCTCCT
GAAGAAGATCGATTTCCGCTATGAGGTCGCCAGTGCAGCGGTCAACAATG
AAACAAGCAGGTTGGTCACAGGTAGTGCCGAGGATACCTGGGCGAGAGTT
TATGACGTCCGCACGGAGGAAGAGCTGGGATTGGAACCTTCCTCGGCCAC
AAGGGCGCGGTATGGCAAGCCCGTCTCTCGACAGATGCGAATTTGGCAGC
AACCGCAGCTGCGGACTTCTCCGCACAACAATCCCATGTTGCGTGATGGT
ATAACAGGTGACTGACATCCCCAAAGTTGTGCCGTTGACCTGCCACGGAC
ACTCACGTCCCGTGCCGCATATCAACTTCTCATCCACTGTCGAGGATGAT
CAGTACTACCTAATCTCTGCCTGCAAAGATGGCGTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:990251..991594 - |
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