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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:997102..997628+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002741-T1 ID=CBS51388_002741-T1|Name=CBS51388_002741-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=527bp|location=Sequence derived from alignment at An03:997102..997628+ (Aspergillus niger CBS 513.88)
ATGGTTGTTCGCATTCGCCTCTCCCGCTTTGGAAACCGGCACCAGCCGTT
CTACAACATTGTTGTAGCCCAGGCACGGTAGGTAAATTTTTTATGGATAC
CGGGAATCAGTATATCGCGTTCCGCGAGCGACTCATTTGGAGGTTTTCTA
AGGGCAATATGTGATCTAATGCTAATGGAGATATATCCTATAGGTCGGCC
CGCGACTCAAAACCTCTTGAAGTCATCGGTACTTTCAACCCTATCCCGCA
GCGCCCTACGAACTTGTCCGAGCAGGAGGCCCGCACCGCCAAAGCATACA
AGGAGATTTCGCTCGATCGATCTCGAGCCAAGTACTGGATTGGTGTTGGT
GCGCAGCCCAGTGATAGTGTTTGGAAGTTACTAAGCCTCGTACGTTGCCT
GCCACTGCACACAAGCATGTCCGCCAGTAGGAAGGGTTATGGACCTGGGT
AACGACAGTGATTGACTAATATTCGGTATTTACTACAGGCCGGGATTGTG
AAAGAAAGCAAAAATGTGCAAAACTGA back to topCoding sequence (CDS) from alignment at An03:997102..997628+ >CBS51388_002741-T1 ID=CBS51388_002741-T1|Name=CBS51388_002741-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=936bp|location=Sequence derived from alignment at An03:997102..997628+ (Aspergillus niger CBS 513.88)
ATGGTTGTTCGCATTCGCCTCTCCCGCTTTGGAAACCGGCACCAGCCGTT
CTACAACATTGTTGTAGCCCAGGCACGGTCGGCCCGCGACTCAAAACCTC
TTGAAGTCATCGGTACTTTCAACCCTATCCCGCAGCGCCCTACGAACTTG
TCCGAGCAGGAGGCCCGCACCGCCAAAGCATACAAGGAGATTTCGCTCGA
TCGATCTCGAGCCAAGTACTGGATTGGTGTTGGTGCGCAGCCCAGTGATA
GTGTTTGGAAGTTACTAAGCCTCGCCGGGATTGTGAAAGAAAGCAAAAAT
GTGCAAAACTGAATGGTTGTTCGCATTCGCCTCTCCCGCTTTGGAAACCG
GCACCAGCCGTTCTACAACATTGTTGTAGCCCAGGCACGGTCGGCCCGCG
ACTCAAAACCTCTTGAAGTCATCGGTACTTTCAACCCTATCCCGCAGCGC
CCTACGAACTTGTCCGAGCAGGAGGCCCGCACCGCCAAAGCATACAAGGA
GATTTCGCTCGATCGATCTCGAGCCAAGTACTGGATTGGTGTTGGTGCGC
AGCCCAGTGATAGTGTTTGGAAGTTACTAAGCCTCGCCGGGATTGTGAAA
GAAAGCAAAAATGTGCAAAACTGAATGGTTGTTCGCATTCGCCTCTCCCG
CTTTGGAAACCGGCACCAGCCGTTCTACAACATTGTTGTAGCCCAGGCAC
GGTCGGCCCGCGACTCAAAACCTCTTGAAGTCATCGGTACTTTCAACCCT
ATCCCGCAGCGCCCTACGAACTTGTCCGAGCAGGAGGCCCGCACCGCCAA
AGCATACAAGGAGATTTCGCTCGATCGATCTCGAGCCAAGTACTGGATTG
GTGTTGGTGCGCAGCCCAGTGATAGTGTTTGGAAGTTACTAAGCCTCGCC
GGGATTGTGAAAGAAAGCAAAAATGTGCAAAACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092652YI |
| DBxref | InterPro:IPR023803 |
| DBxref | InterPro:IPR000307 |
| DBxref | PFAM:PF00886 |
| Product | mitochondrial |
| Product | Ribosomal protein S16 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:997102..997628 + |
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