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CBS51388_002785-T1, CBS51388_002785-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002785-T1
Unique NameCBS51388_002785-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:1129277..1130147+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002785-T1 ID=CBS51388_002785-T1|Name=CBS51388_002785-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=871bp|location=Sequence derived from alignment at An03:1129277..1130147+ (Aspergillus niger CBS 513.88)
ATGGTATAGTCTCTTTTCCAGCTGTAGCACATGTTCCTTCGAGTCATGGA
ATATCCGTCCACTAACATCCCCCCACCAGCCTCACGCAGACTCCTCTTAC
TTCGGCGCCGGCAATGGCTCCAAATCCGAAGTCTACACCCAGGTCCTAGA
GCAAGCTCGGGGTCTGGTATACGACCAGCGCAATTGGGTACGATCTTCTT
ACCTCTAACTCCTATCTCTCCCATATCCAATTCACCAGCTAACCAACCAC
TTCTCCCACCGCCAACAGGTCAGGTAAGAACAACTTCAACTATCGCGCCC
CCTCTCACCCAAAGAGCACAGCAACCTAACCCTCTCCAAACCAATACAGT
AATTTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCC
CGCCCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACATCCGCCAGGACA
AGTTCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCC
GTCCTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCG
CTTCGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGCGCGAGACGGTCG
TCGTGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGC
AGCCGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGGTGAGTAC
TGGATCTATGTTATCTGTATCTAATCTAGTGGATGATGGCTGATGGTGTA
TGTTGGGCAGACTGTTGCGATTATCGATATTGATTGTGCGGAGCCGGATG
GATTTGATGATGAGGATAAAAAATATCTGGAGGAGTTGGCTGCGCTGCTG
GCGGAGTGCTGTGATTGGTGA
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Coding sequence (CDS) from alignment at An03:1129277..1130147+

>CBS51388_002785-T1 ID=CBS51388_002785-T1|Name=CBS51388_002785-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3000bp|location=Sequence derived from alignment at An03:1129277..1130147+ (Aspergillus niger CBS 513.88)
ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATC
CGAAGTCTACACCCAGGTCCTAGAGCAAGCTCGGGGTCTGGTATACGACC
AGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT
TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGC
CCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACATCCGCCAGGACAAGT
TCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC
CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTT
CGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGCGCGAGACGGTCGTCG
TGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC
CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGAT
TATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGATGAGGATAAAA
AATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATC
CGAAGTCTACACCCAGGTCCTAGAGCAAGCTCGGGGTCTGGTATACGACC
AGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT
TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGC
CCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACATCCGCCAGGACAAGT
TCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC
CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTT
CGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGCGCGAGACGGTCGTCG
TGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC
CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGAT
TATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGATGAGGATAAAA
AATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATC
CGAAGTCTACACCCAGGTCCTAGAGCAAGCTCGGGGTCTGGTATACGACC
AGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT
TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGC
CCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACATCCGCCAGGACAAGT
TCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC
CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTT
CGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGCGCGAGACGGTCGTCG
TGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC
CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGAT
TATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGATGAGGATAAAA
AATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATC
CGAAGTCTACACCCAGGTCCTAGAGCAAGCTCGGGGTCTGGTATACGACC
AGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT
TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGC
CCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACATCCGCCAGGACAAGT
TCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC
CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTT
CGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGCGCGAGACGGTCGTCG
TGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC
CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGAT
TATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGATGAGGATAAAA
AATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
ATGCCTCACGCAGACTCCTCTTACTTCGGCGCCGGCAATGGCTCCAAATC
CGAAGTCTACACCCAGGTCCTAGAGCAAGCTCGGGGTCTGGTATACGACC
AGCGCAATTGGCTAACCAACCACTTCTCCCACCGCCAACAGGTCAGTAAT
TTCTCCAACGTCGCCTCCCTCCTCTGGCACGCCTACGCTGCTCTCCCCGC
CCCCTCCTCCTCCGTCAACTGGGCCGGCTTCTACATCCGCCAGGACAAGT
TCCCCGTCCTCGGCGCACCTTTGGAAGAGGACAGCAAAAAGAAGCCCGTC
CTCCTTCTCGGTCCATTCCAGGGCCGTCCGGCATGTCAGGAGATTCGCTT
CGGGCGGGGCGTGTGCGGAACGGCAGCTGAGAAGCGCGAGACGGTCGTCG
TGCCGGATGTGTTGAACTTCCCGGGCCATATTGCGTGCGATGCGAGCAGC
CGGAGTGAGATTGTGGTGCCGATTTTGAGCAAGGGGGAGACTGTTGCGAT
TATCGATATTGATTGTGCGGAGCCGGATGGATTTGATGATGAGGATAAAA
AATATCTGGAGGAGTTGGCTGCGCTGCTGGCGGAGTGCTGTGATTGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002785CBS51388_002785Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002785-T1CBS51388_002785-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002785-T1.exon1CBS51388_002785-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002785-T1.exon2CBS51388_002785-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002785-T1.exon3CBS51388_002785-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002785-T1.exon4CBS51388_002785-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_002785-T1.exon5CBS51388_002785-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002785-T1.cdsCBS51388_002785-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
DBxrefInterPro:IPR000614
DBxrefInterPro:IPR003018
DBxrefInterPro:IPR029016
DBxrefPFAM:PF13185
DBxrefPFAM:PF01590
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:1129277..1130147 +
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