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CBS51388_002790-T1, CBS51388_002790-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002790-T1
Unique NameCBS51388_002790-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:1140471..1141325-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002790-T1 ID=CBS51388_002790-T1|Name=CBS51388_002790-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=855bp|location=Sequence derived from alignment at An03:1140471..1141325- (Aspergillus niger CBS 513.88)
ATGCGCATTCTCTGGTAATGCTGCTGTGAAAGCTGCTGTCAACTTTACTT
TCTTGATGCTGACATTTCGATAGTCTACATGGGGCGGGTACCAATTCCCG
AGTAAGTATTGACCCTAGCTAGCGATATCAGCTCCATGCGACCTTCTGCT
AATCGATACTCTGCAACATCAAAGATATTCGAGATCCAGACAGCTGCCAT
TCGGTATGAACTAGGCGACAATCATATTTATGATTTTGTTGAAGGAACCA
TTCCTTCCAAGATGCAACCAGGTACAGTGGCCGGAGAACAGACCCCTCGC
GAAGGAGTCGGCTAAATGTAGCTTGGCACAGGTATTGATGTGGTGGCTTG
GAAGGACGAACCAGTGTACGCCTACTTCGATGAGCACAATCCCCAAACCG
GATTTGCGGCTTATCATTATTTGGAAGACTACCTTCTCGACGAGGGGCGC
TATGATGGGGTTATCGCATTCAGCCAAGCAGGCACGATGATCCTCACGTA
CCTGATTCATCTTGCCAAGCGCGATCCTCAGGCTGAGATGCCATTCAAAT
TTGCAATTATCCTTTCGATCACCCATCCCCCTCTTGATTATGAAGCTCTT
CAGAAAGGTCGTGTGATGACCGTGGATCTCGAAGCCACCAAAGGCATTAT
TCCAATCCCAACGGCCCACATCTGGGGCTCACTAGACGAGCCAGCCAGCC
GGGTAGCCACGTCAAATAGTGTTTGCAAGGCTGAGGTGAGATGGGTGTAT
GTTCACGGTCGAGGGCACGAAGTTCCCGGCGGAGGGTCAATGGAAGATGT
GACCCAAGCCGTCAATGTTATTCGCAGGGCAGTTGAGACAGCATCCAATC
ACTGA
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Coding sequence (CDS) from alignment at An03:1140471..1141325-

>CBS51388_002790-T1 ID=CBS51388_002790-T1|Name=CBS51388_002790-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2652bp|location=Sequence derived from alignment at An03:1140471..1141325- (Aspergillus niger CBS 513.88)
GTATTGATGTGGTGGCTTGGAAGGACGAACCAGTGTACGCCTACTTCGAT
GAGCACAATCCCCAAACCGGATTTGCGGCTTATCATTATTTGGAAGACTA
CCTTCTCGACGAGGGGCGCTATGATGGGGTTATCGCATTCAGCCAAGCAG
GCACGATGATCCTCACGTACCTGATTCATCTTGCCAAGCGCGATCCTCAG
GCTGAGATGCCATTCAAATTTGCAATTATCCTTTCGATCACCCATCCCCC
TCTTGATTATGAAGCTCTTCAGAAAGGTCGTGTGATGACCGTGGATCTCG
AAGCCACCAAAGGCATTATTCCAATCCCAACGGCCCACATCTGGGGCTCA
CTAGACGAGCCAGCCAGCCGGGTAGCCACGTCAAATAGTGTTTGCAAGGC
TGAGGTGAGATGGGTGTATGTTCACGGTCGAGGGCACGAAGTTCCCGGCG
GAGGGTCAATGGAAGATGTGACCCAAGCCGTCAATGTTATTCGCAGGGCA
GTTGAGACAGCATCCAATCACTGAATATTCGAGATCCAGACAGCTGCCAT
TCGGTATGAACTAGGCGACAATCATATTTATGATTTTGTTGAAGGAACCA
TTCCTTCCAAGATGCAACCAGTCTACATGGGGCGGGTACCAATTCCCGAA
TGCGCATTCTCTGGTATTGATGTGGTGGCTTGGAAGGACGAACCAGTGTA
CGCCTACTTCGATGAGCACAATCCCCAAACCGGATTTGCGGCTTATCATT
ATTTGGAAGACTACCTTCTCGACGAGGGGCGCTATGATGGGGTTATCGCA
TTCAGCCAAGCAGGCACGATGATCCTCACGTACCTGATTCATCTTGCCAA
GCGCGATCCTCAGGCTGAGATGCCATTCAAATTTGCAATTATCCTTTCGA
TCACCCATCCCCCTCTTGATTATGAAGCTCTTCAGAAAGGTCGTGTGATG
ACCGTGGATCTCGAAGCCACCAAAGGCATTATTCCAATCCCAACGGCCCA
CATCTGGGGCTCACTAGACGAGCCAGCCAGCCGGGTAGCCACGTCAAATA
GTGTTTGCAAGGCTGAGGTGAGATGGGTGTATGTTCACGGTCGAGGGCAC
GAAGTTCCCGGCGGAGGGTCAATGGAAGATGTGACCCAAGCCGTCAATGT
TATTCGCAGGGCAGTTGAGACAGCATCCAATCACTGAATATTCGAGATCC
AGACAGCTGCCATTCGGTATGAACTAGGCGACAATCATATTTATGATTTT
GTTGAAGGAACCATTCCTTCCAAGATGCAACCAGTCTACATGGGGCGGGT
ACCAATTCCCGAATGCGCATTCTCTGGTATTGATGTGGTGGCTTGGAAGG
ACGAACCAGTGTACGCCTACTTCGATGAGCACAATCCCCAAACCGGATTT
GCGGCTTATCATTATTTGGAAGACTACCTTCTCGACGAGGGGCGCTATGA
TGGGGTTATCGCATTCAGCCAAGCAGGCACGATGATCCTCACGTACCTGA
TTCATCTTGCCAAGCGCGATCCTCAGGCTGAGATGCCATTCAAATTTGCA
ATTATCCTTTCGATCACCCATCCCCCTCTTGATTATGAAGCTCTTCAGAA
AGGTCGTGTGATGACCGTGGATCTCGAAGCCACCAAAGGCATTATTCCAA
TCCCAACGGCCCACATCTGGGGCTCACTAGACGAGCCAGCCAGCCGGGTA
GCCACGTCAAATAGTGTTTGCAAGGCTGAGGTGAGATGGGTGTATGTTCA
CGGTCGAGGGCACGAAGTTCCCGGCGGAGGGTCAATGGAAGATGTGACCC
AAGCCGTCAATGTTATTCGCAGGGCAGTTGAGACAGCATCCAATCACTGA
ATATTCGAGATCCAGACAGCTGCCATTCGGTATGAACTAGGCGACAATCA
TATTTATGATTTTGTTGAAGGAACCATTCCTTCCAAGATGCAACCAGTCT
ACATGGGGCGGGTACCAATTCCCGAATGCGCATTCTCTGGTATTGATGTG
GTGGCTTGGAAGGACGAACCAGTGTACGCCTACTTCGATGAGCACAATCC
CCAAACCGGATTTGCGGCTTATCATTATTTGGAAGACTACCTTCTCGACG
AGGGGCGCTATGATGGGGTTATCGCATTCAGCCAAGCAGGCACGATGATC
CTCACGTACCTGATTCATCTTGCCAAGCGCGATCCTCAGGCTGAGATGCC
ATTCAAATTTGCAATTATCCTTTCGATCACCCATCCCCCTCTTGATTATG
AAGCTCTTCAGAAAGGTCGTGTGATGACCGTGGATCTCGAAGCCACCAAA
GGCATTATTCCAATCCCAACGGCCCACATCTGGGGCTCACTAGACGAGCC
AGCCAGCCGGGTAGCCACGTCAAATAGTGTTTGCAAGGCTGAGGTGAGAT
GGGTGTATGTTCACGGTCGAGGGCACGAAGTTCCCGGCGGAGGGTCAATG
GAAGATGTGACCCAAGCCGTCAATGTTATTCGCAGGGCAGTTGAGACAGC
ATCCAATCACTGAATATTCGAGATCCAGACAGCTGCCATTCGGTATGAAC
TAGGCGACAATCATATTTATGATTTTGTTGAAGGAACCATTCCTTCCAAG
ATGCAACCAGTCTACATGGGGCGGGTACCAATTCCCGAATGCGCATTCTC
TG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002790CBS51388_002790Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002790-T1CBS51388_002790-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002790-T1.cdsCBS51388_002790-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002790-T1.exon4CBS51388_002790-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_002790-T1.exon3CBS51388_002790-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002790-T1.exon2CBS51388_002790-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002790-T1.exon1CBS51388_002790-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR005645
DBxrefPFAM:PF03959
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:1140471..1141325 -
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