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CBS51388_002796-T1, CBS51388_002796-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002796-T1
Unique NameCBS51388_002796-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:1156344..1159292-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002796-T1 ID=CBS51388_002796-T1|Name=CBS51388_002796-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2949bp|location=Sequence derived from alignment at An03:1156344..1159292- (Aspergillus niger CBS 513.88)
ATGGGGAGCGACTTTCAGCTATTCTCTCCCCTCCAGTCGTCGGATAGAAG
AGACTCACAGGCCGAGTCTACGACCTTCGCTCAGTCTACAACGGAAGATT
CCAGTCAGGATTGGACGCAGTGGATGAGATGGGATGACAAGGGCTTTGCG
GATGGGGCAAAAGACGTCTCTCACTCCCCCTTCGATACTACCTTCACCTC
GCCCAATGCGTCAATTGGCAACACAGATCTCTTTCAAAAGTCCGACTTCT
CACCCGACATCAACCTGGATTGTACCAATATTCCCTTTGATTCCTTGCTC
GATCAAAATTACAGTGGCGTGTGCCAATCGAAGATCGGATCCATTGGTAC
CGATCTCCAGTCGGCACTCTCCGCTACGTCCGGCTCTCCGGTATCCTCGG
AAGGAACTGCTCGCAAACGCAAGTCGGGCAGTGATGATGATGGCTCAACC
GTCAGTGGAGTCATGCCGACCGGTAAGAAGATGCCGGCCAAAAAGCGAGC
ACACAACGTCATCGAGAAGAGGTATCGAGCCAACCTTAATGAGAAGATTG
CCGAGCTGAGGGACAGTGTGCCCAGTCTCCGAGCGTCAAAAAATGCGTCG
GGTAATCTCCTGGATGATGACGATGGAGAAGGGGTCACTCCCGCCAACAA
GTTGAACAAGGCCTCTATTCTCTCAAAAGCCACAGAGTATATTCGTCACC
TTGAGATCCGTAATAAGCGACTTGAGGATGAGAACATGGCATTGAAGAAC
CGACTTCGTCAAGCGGAAAAGGCCGTTGACCAGTCACTGACCTCCGCAGC
GTCCGTTTCCTCACCCAGCAACTACACCGTTTCCACAGAATCTGGCGCAA
GCTCATCCCCCAGTGTGTTCTCACATGTGGAGGATAGTCCTAGCGACCAC
TCGCCGACGTCTTTGTATCCTCCCGAAGGTCTGCTGAAGGTGCCCGATGC
CTTCAAACGCATGCGAGAGGAATCCACCGCTAAAGATAACGCGTTCTCTC
AATCATACATCCAATACCCCAGCAGCAATAACAGTGTCTCATCCCCATGC
GGTGGTCGTACCAGGCGATCATATTACCCCAACAAGTACATGCTTGGTGC
CCTTGCTGGCTTAATGATCGTCGAGGGTATGGGCAGCGAAAAGAACACGG
AATCAACCGCCAAGGGGCTGCTGGCAATGCCATTCAACCTGTTCGGAAAC
TTGCAAACCAGCCTCCAAAGTCCCACAGCAGCATACTGGTTTGCAATGGC
ACGAAACTTTTGGTATTCGTGGCATGCACGAGCCATCTCGCATTTTCTTA
TTCTCGCTACCCTTGTCGTCGGTAGTGCATTCGTGGTCTTCGTTTATTTG
TTCAACGCTACCCCCGGCGAACAGTCCTCTTCATTGAAGACTTCGTCACC
ATCGGATACATCGTCAAATTTCCGGCGCCAGGCCTGGCTGACGAGCATAC
AGCGAGTCGGTGTTCCACGTCACCGCTTTTTCCACGAGTGGTACGTAGTG
ACCTCGCGCTGCTTCGAGTATGTCCTGCGGTGTCTCCTGGGCTGGAAACT
GTACTCTTCTCTTACAGGAGTTACCGAGGAGGACGAGAAGGGGCGAGTCA
AGACCTGGGATATTGCAATCGACGCACAATTGGCTGGTGGTGATGCCGAA
ATTAGTAAGAGTCGTCTAGTCCTGACTATCTTTGCGGCAGGCACCCTGCC
TCGGAGTCCTATGAGGATGATGCTCAAAGCCCTCCACTGCCGCATTCTGC
TCTGGAGAGTTGGGGACCGCGGCTCTTGGAGCTTCGACTTGTCGAATGAT
GTCGCTCGTTCACTGGCAAGGTATCAATGGGACCTCGCCCGGAAAATGCA
CAAGGCTATGCCGAAAGACCATCCTGATGCCCTGCCTAGTCATCTGGCTG
CGTTGTTACAACTGGACTGCGACGAGGTCATGATTGACAGCATCGTGCAA
AGAGCGGCAAACCTCACTTGGAATCGTCCCACTCAAGAAGGTACCGATGA
TGATCAAGCTCTCCTGGATGTGGTGGAAGAGGACCCTGCCATTCAATCTT
CCCTGGATGCCCTTGCGGCTTGGTGGTCTAGCCATCTTTTGCAACGGGCG
CTGCTGAGATATTTCGAAGCTAGCTCTGGTGGGCCTGACGCAAAGAAGAG
TCGCGATCTATTCAAGGCTAAGATTAAATTGGCCCTGGACGTCGCTCCCC
AGCCTTCAGCCGCTCATACTCGAGCTTTGGTGATGAAGGCAGTATTCTTC
GAGCAAGACCGCGCTGCGAATATCGGATCCGTCCTTGCGGCATTGCCGAA
AGACAAAGGGAAGAGCAAACAAAACCAAGCATCCAACTTCCTTGACTCGT
CTCTTCCCGTGTCTGTGCGGGAAGAGATCGCGATATCAGTTCGCTGTGCA
ATGATTGCGGCCATTTTTACCGCTAGGACTACAGGCGACACCTCTCTACC
GGCGTCCTTTACCATCCAAAGAGCTGTTACGTGGTTCAATCAGTTGCCGC
TTGACCCGGTGGATCTGACGCTTCTTGGGTTTGCGTCTGTGTACCATTTG
CTCCATGTCTTAGCTTCTGACACCGACTATCTGTCGTCTTCCGAGTCCTC
ATCGCCATCTTCGCCTGTATCGCGCAGCTCCACCCCGTCGTCTTCGGTTT
CCTCTGACGAAGAGGGGAATGACAAGCCACGCCTGTCGCAGAAGCCCGAG
ATTTTGCCGCAATCCATTCCGAATTTGGGTCGTGTAGCATCCGAACTCAT
GTACTGGGCGCGGAATGCATACAATCCTGCTTTCTACGGTTTCACTTCTC
AACTTGTCAAGGTCATCGAAACCGAATGCACCTCGCTATGCCATAGTGCC
GGGGTCGACGTGGCCGACTACTCTTGTATCCAGGAGGAGAAGATCAAGTC
GAAACAATTAAAAGACAAAAAGAAGAAAAAGTACCCGAGAAGGTCGTGA
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Coding sequence (CDS) from alignment at An03:1156344..1159292-

>CBS51388_002796-T1 ID=CBS51388_002796-T1|Name=CBS51388_002796-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2949bp|location=Sequence derived from alignment at An03:1156344..1159292- (Aspergillus niger CBS 513.88)
ATGGGGAGCGACTTTCAGCTATTCTCTCCCCTCCAGTCGTCGGATAGAAG
AGACTCACAGGCCGAGTCTACGACCTTCGCTCAGTCTACAACGGAAGATT
CCAGTCAGGATTGGACGCAGTGGATGAGATGGGATGACAAGGGCTTTGCG
GATGGGGCAAAAGACGTCTCTCACTCCCCCTTCGATACTACCTTCACCTC
GCCCAATGCGTCAATTGGCAACACAGATCTCTTTCAAAAGTCCGACTTCT
CACCCGACATCAACCTGGATTGTACCAATATTCCCTTTGATTCCTTGCTC
GATCAAAATTACAGTGGCGTGTGCCAATCGAAGATCGGATCCATTGGTAC
CGATCTCCAGTCGGCACTCTCCGCTACGTCCGGCTCTCCGGTATCCTCGG
AAGGAACTGCTCGCAAACGCAAGTCGGGCAGTGATGATGATGGCTCAACC
GTCAGTGGAGTCATGCCGACCGGTAAGAAGATGCCGGCCAAAAAGCGAGC
ACACAACGTCATCGAGAAGAGGTATCGAGCCAACCTTAATGAGAAGATTG
CCGAGCTGAGGGACAGTGTGCCCAGTCTCCGAGCGTCAAAAAATGCGTCG
GGTAATCTCCTGGATGATGACGATGGAGAAGGGGTCACTCCCGCCAACAA
GTTGAACAAGGCCTCTATTCTCTCAAAAGCCACAGAGTATATTCGTCACC
TTGAGATCCGTAATAAGCGACTTGAGGATGAGAACATGGCATTGAAGAAC
CGACTTCGTCAAGCGGAAAAGGCCGTTGACCAGTCACTGACCTCCGCAGC
GTCCGTTTCCTCACCCAGCAACTACACCGTTTCCACAGAATCTGGCGCAA
GCTCATCCCCCAGTGTGTTCTCACATGTGGAGGATAGTCCTAGCGACCAC
TCGCCGACGTCTTTGTATCCTCCCGAAGGTCTGCTGAAGGTGCCCGATGC
CTTCAAACGCATGCGAGAGGAATCCACCGCTAAAGATAACGCGTTCTCTC
AATCATACATCCAATACCCCAGCAGCAATAACAGTGTCTCATCCCCATGC
GGTGGTCGTACCAGGCGATCATATTACCCCAACAAGTACATGCTTGGTGC
CCTTGCTGGCTTAATGATCGTCGAGGGTATGGGCAGCGAAAAGAACACGG
AATCAACCGCCAAGGGGCTGCTGGCAATGCCATTCAACCTGTTCGGAAAC
TTGCAAACCAGCCTCCAAAGTCCCACAGCAGCATACTGGTTTGCAATGGC
ACGAAACTTTTGGTATTCGTGGCATGCACGAGCCATCTCGCATTTTCTTA
TTCTCGCTACCCTTGTCGTCGGTAGTGCATTCGTGGTCTTCGTTTATTTG
TTCAACGCTACCCCCGGCGAACAGTCCTCTTCATTGAAGACTTCGTCACC
ATCGGATACATCGTCAAATTTCCGGCGCCAGGCCTGGCTGACGAGCATAC
AGCGAGTCGGTGTTCCACGTCACCGCTTTTTCCACGAGTGGTACGTAGTG
ACCTCGCGCTGCTTCGAGTATGTCCTGCGGTGTCTCCTGGGCTGGAAACT
GTACTCTTCTCTTACAGGAGTTACCGAGGAGGACGAGAAGGGGCGAGTCA
AGACCTGGGATATTGCAATCGACGCACAATTGGCTGGTGGTGATGCCGAA
ATTAGTAAGAGTCGTCTAGTCCTGACTATCTTTGCGGCAGGCACCCTGCC
TCGGAGTCCTATGAGGATGATGCTCAAAGCCCTCCACTGCCGCATTCTGC
TCTGGAGAGTTGGGGACCGCGGCTCTTGGAGCTTCGACTTGTCGAATGAT
GTCGCTCGTTCACTGGCAAGGTATCAATGGGACCTCGCCCGGAAAATGCA
CAAGGCTATGCCGAAAGACCATCCTGATGCCCTGCCTAGTCATCTGGCTG
CGTTGTTACAACTGGACTGCGACGAGGTCATGATTGACAGCATCGTGCAA
AGAGCGGCAAACCTCACTTGGAATCGTCCCACTCAAGAAGGTACCGATGA
TGATCAAGCTCTCCTGGATGTGGTGGAAGAGGACCCTGCCATTCAATCTT
CCCTGGATGCCCTTGCGGCTTGGTGGTCTAGCCATCTTTTGCAACGGGCG
CTGCTGAGATATTTCGAAGCTAGCTCTGGTGGGCCTGACGCAAAGAAGAG
TCGCGATCTATTCAAGGCTAAGATTAAATTGGCCCTGGACGTCGCTCCCC
AGCCTTCAGCCGCTCATACTCGAGCTTTGGTGATGAAGGCAGTATTCTTC
GAGCAAGACCGCGCTGCGAATATCGGATCCGTCCTTGCGGCATTGCCGAA
AGACAAAGGGAAGAGCAAACAAAACCAAGCATCCAACTTCCTTGACTCGT
CTCTTCCCGTGTCTGTGCGGGAAGAGATCGCGATATCAGTTCGCTGTGCA
ATGATTGCGGCCATTTTTACCGCTAGGACTACAGGCGACACCTCTCTACC
GGCGTCCTTTACCATCCAAAGAGCTGTTACGTGGTTCAATCAGTTGCCGC
TTGACCCGGTGGATCTGACGCTTCTTGGGTTTGCGTCTGTGTACCATTTG
CTCCATGTCTTAGCTTCTGACACCGACTATCTGTCGTCTTCCGAGTCCTC
ATCGCCATCTTCGCCTGTATCGCGCAGCTCCACCCCGTCGTCTTCGGTTT
CCTCTGACGAAGAGGGGAATGACAAGCCACGCCTGTCGCAGAAGCCCGAG
ATTTTGCCGCAATCCATTCCGAATTTGGGTCGTGTAGCATCCGAACTCAT
GTACTGGGCGCGGAATGCATACAATCCTGCTTTCTACGGTTTCACTTCTC
AACTTGTCAAGGTCATCGAAACCGAATGCACCTCGCTATGCCATAGTGCC
GGGGTCGACGTGGCCGACTACTCTTGTATCCAGGAGGAGAAGATCAAGTC
GAAACAATTAAAAGACAAAAAGAAGAAAAAGTACCCGAGAAGGTCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045944positive regulation of transcription by RNA polymerase II
GO:0032933SREBP signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002796CBS51388_002796Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002796-T1.cdsCBS51388_002796-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002796-T1.exon1CBS51388_002796-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002796-T1CBS51388_002796-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019006
DBxrefInterPro:IPR036638
DBxrefInterPro:IPR011598
DBxrefPFAM:PF00010
DBxrefPFAM:PF09427
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:1156344..1159292 -
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