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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:1238462..1239588- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002826-T1 ID=CBS51388_002826-T1|Name=CBS51388_002826-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1127bp|location=Sequence derived from alignment at An03:1238462..1239588- (Aspergillus niger CBS 513.88)
ATGTTCGGAACTACTGCTTCTCGCCTCATCCTGGGGATGCTCAGCTGTGT
GGCCCTCCTGCCCAGCCAGGCTTTGGCGGCACACCAGCACATCGGTCACC
GCCACCATCATCCCTTCAATCCCACCCAGCAACCCCAGGCCAGCACGCTC
ATCACTGTCGCTCAGGGTAGCGCTGCCACTGAAGCCCCTTCCGCATGCTA
CTGGGCCCCATCTGCCGTATCTTCAGTGATTGCCTCGGCCTCGGCGGAGG
CCTCGGCGGTAACTCAGAGCAACATCACCGCCAAGGTCATCATCCCATTC
TACGTCTATCCTGAAGATGGTGCCTGGACCCCCATGGAAGAGCTGTACGT
TGTAACACGATGACTCAAATCTCTCAATCACTAACCTCCCCAGCGTCGCC
GCCTTCCCCAATGTCCACTTCACCATCATCATCAACCCCGATAGCGGTCC
CGGCTCTAGCAGTCTCCCAGACAGCAGCTTCCTGACCGCCGTCCCCAGGC
TCACCAGCTACAGCAACGTGCTCGCCATCGGCTACGTCCCGACAGAGAAG
GGCACCCGCGCCATTTCAGACGTCGAAAGCGACATCAAGACCTACGCCGG
CTGGCCTTCCGCCTCCGGCAACTCCTCTTTCGCCGTGCACGGCATCTTCC
TCGATGAAGCCCCCAACGCCTACAGCGAGGAGCTGGTTTCGTACTACCAG
CAACTAACCACTCTCATCAAAGAGAGTTCCGGCCTGGGACCGGAGAATTT
TGTATGTCCTGTCCTCACCCTACCACCTCGCTTCCGCTGTAACTAATTAA
TGATATGTATAGGTGGTGACCAACCCCGGCACAGTCCCTGACTCCGCCTA
CCTCAGCATTCCCGACTCCACGGTGGTCTTCGAGTCGCCCTACGACTCGT
TCATGAGCGCCGTGTCAGCAGACTCGTTCGCTAGCATTAGGGGCGGAAAC
CACAGCGCTCTGGCTACCATGGTCTACTCGGTCCCGGATACTGTGCATCT
CCCGACCCTGATTAGCCAGGTCGGGAATATCTCGGACCAGATCTTCCTGG
GCAATACGAGTTCGTATACGGTGTATAACTCGTACATGAACCAGGTTATT
CCATTGTTGTTGCCTGCTTCTTCTTAG back to topCoding sequence (CDS) from alignment at An03:1238462..1239588- >CBS51388_002826-T1 ID=CBS51388_002826-T1|Name=CBS51388_002826-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3051bp|location=Sequence derived from alignment at An03:1238462..1239588- (Aspergillus niger CBS 513.88)
GTGGTGACCAACCCCGGCACAGTCCCTGACTCCGCCTACCTCAGCATTCC
CGACTCCACGGTGGTCTTCGAGTCGCCCTACGACTCGTTCATGAGCGCCG
TGTCAGCAGACTCGTTCGCTAGCATTAGGGGCGGAAACCACAGCGCTCTG
GCTACCATGGTCTACTCGGTCCCGGATACTGTGCATCTCCCGACCCTGAT
TAGCCAGGTCGGGAATATCTCGGACCAGATCTTCCTGGGCAATACGAGTT
CGTATACGGTGTATAACTCGTACATGAACCAGGTTATTCCATTGTTGTTG
CCTGCTTCTTCTTAGCGTCGCCGCCTTCCCCAATGTCCACTTCACCATCA
TCATCAACCCCGATAGCGGTCCCGGCTCTAGCAGTCTCCCAGACAGCAGC
TTCCTGACCGCCGTCCCCAGGCTCACCAGCTACAGCAACGTGCTCGCCAT
CGGCTACGTCCCGACAGAGAAGGGCACCCGCGCCATTTCAGACGTCGAAA
GCGACATCAAGACCTACGCCGGCTGGCCTTCCGCCTCCGGCAACTCCTCT
TTCGCCGTGCACGGCATCTTCCTCGATGAAGCCCCCAACGCCTACAGCGA
GGAGCTGGTTTCGTACTACCAGCAACTAACCACTCTCATCAAAGAGAGTT
CCGGCCTGGGACCGGAGAATTTTATGTTCGGAACTACTGCTTCTCGCCTC
ATCCTGGGGATGCTCAGCTGTGTGGCCCTCCTGCCCAGCCAGGCTTTGGC
GGCACACCAGCACATCGGTCACCGCCACCATCATCCCTTCAATCCCACCC
AGCAACCCCAGGCCAGCACGCTCATCACTGTCGCTCAGGGTAGCGCTGCC
ACTGAAGCCCCTTCCGCATGCTACTGGGCCCCATCTGCCGTATCTTCAGT
GATTGCCTCGGCCTCGGCGGAGGCCTCGGCGGTAACTCAGAGCAACATCA
CCGCCAAGGTCATCATCCCATTCTACGTCTATCCTGAAGATGGTGCCTGG
ACCCCCATGGAAGAGCTGTGGTGACCAACCCCGGCACAGTCCCTGACTCC
GCCTACCTCAGCATTCCCGACTCCACGGTGGTCTTCGAGTCGCCCTACGA
CTCGTTCATGAGCGCCGTGTCAGCAGACTCGTTCGCTAGCATTAGGGGCG
GAAACCACAGCGCTCTGGCTACCATGGTCTACTCGGTCCCGGATACTGTG
CATCTCCCGACCCTGATTAGCCAGGTCGGGAATATCTCGGACCAGATCTT
CCTGGGCAATACGAGTTCGTATACGGTGTATAACTCGTACATGAACCAGG
TTATTCCATTGTTGTTGCCTGCTTCTTCTTAGCGTCGCCGCCTTCCCCAA
TGTCCACTTCACCATCATCATCAACCCCGATAGCGGTCCCGGCTCTAGCA
GTCTCCCAGACAGCAGCTTCCTGACCGCCGTCCCCAGGCTCACCAGCTAC
AGCAACGTGCTCGCCATCGGCTACGTCCCGACAGAGAAGGGCACCCGCGC
CATTTCAGACGTCGAAAGCGACATCAAGACCTACGCCGGCTGGCCTTCCG
CCTCCGGCAACTCCTCTTTCGCCGTGCACGGCATCTTCCTCGATGAAGCC
CCCAACGCCTACAGCGAGGAGCTGGTTTCGTACTACCAGCAACTAACCAC
TCTCATCAAAGAGAGTTCCGGCCTGGGACCGGAGAATTTTATGTTCGGAA
CTACTGCTTCTCGCCTCATCCTGGGGATGCTCAGCTGTGTGGCCCTCCTG
CCCAGCCAGGCTTTGGCGGCACACCAGCACATCGGTCACCGCCACCATCA
TCCCTTCAATCCCACCCAGCAACCCCAGGCCAGCACGCTCATCACTGTCG
CTCAGGGTAGCGCTGCCACTGAAGCCCCTTCCGCATGCTACTGGGCCCCA
TCTGCCGTATCTTCAGTGATTGCCTCGGCCTCGGCGGAGGCCTCGGCGGT
AACTCAGAGCAACATCACCGCCAAGGTCATCATCCCATTCTACGTCTATC
CTGAAGATGGTGCCTGGACCCCCATGGAAGAGCTGTGGTGACCAACCCCG
GCACAGTCCCTGACTCCGCCTACCTCAGCATTCCCGACTCCACGGTGGTC
TTCGAGTCGCCCTACGACTCGTTCATGAGCGCCGTGTCAGCAGACTCGTT
CGCTAGCATTAGGGGCGGAAACCACAGCGCTCTGGCTACCATGGTCTACT
CGGTCCCGGATACTGTGCATCTCCCGACCCTGATTAGCCAGGTCGGGAAT
ATCTCGGACCAGATCTTCCTGGGCAATACGAGTTCGTATACGGTGTATAA
CTCGTACATGAACCAGGTTATTCCATTGTTGTTGCCTGCTTCTTCTTAGC
GTCGCCGCCTTCCCCAATGTCCACTTCACCATCATCATCAACCCCGATAG
CGGTCCCGGCTCTAGCAGTCTCCCAGACAGCAGCTTCCTGACCGCCGTCC
CCAGGCTCACCAGCTACAGCAACGTGCTCGCCATCGGCTACGTCCCGACA
GAGAAGGGCACCCGCGCCATTTCAGACGTCGAAAGCGACATCAAGACCTA
CGCCGGCTGGCCTTCCGCCTCCGGCAACTCCTCTTTCGCCGTGCACGGCA
TCTTCCTCGATGAAGCCCCCAACGCCTACAGCGAGGAGCTGGTTTCGTAC
TACCAGCAACTAACCACTCTCATCAAAGAGAGTTCCGGCCTGGGACCGGA
GAATTTTATGTTCGGAACTACTGCTTCTCGCCTCATCCTGGGGATGCTCA
GCTGTGTGGCCCTCCTGCCCAGCCAGGCTTTGGCGGCACACCAGCACATC
GGTCACCGCCACCATCATCCCTTCAATCCCACCCAGCAACCCCAGGCCAG
CACGCTCATCACTGTCGCTCAGGGTAGCGCTGCCACTGAAGCCCCTTCCG
CATGCTACTGGGCCCCATCTGCCGTATCTTCAGTGATTGCCTCGGCCTCG
GCGGAGGCCTCGGCGGTAACTCAGAGCAACATCACCGCCAAGGTCATCAT
CCCATTCTACGTCTATCCTGAAGATGGTGCCTGGACCCCCATGGAAGAGC
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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-26) |
| Note | CAZy:GH135 |
| DBxref | InterPro:IPR021986 |
| DBxref | PFAM:PF12138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:1238462..1239588 - |
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