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CBS51388_002828-T1, CBS51388_002828-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002828-T1
Unique NameCBS51388_002828-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:1245016..1246567-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002828-T1 ID=CBS51388_002828-T1|Name=CBS51388_002828-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1552bp|location=Sequence derived from alignment at An03:1245016..1246567- (Aspergillus niger CBS 513.88)
ATGCCTTGCACGCCCAGCCCCTTCAAAGCCCCAGTGCCCAACACCAACCC
GGCTCTGGAAGCCGTGGCAGAGAAGCTTCGCGCCAGCGGCAGCAGAAGAC
TCCTCACCCCAGAAGGCATCGGGGCGCTCTCCACCTCGACGAAGAACATC
ATCGACAATCTATATATCAATGTCCGAAAGAACTGCTGGGCAGACGCCAT
CTGCGAAACCCCAGCAGGCCTCCGCTCTGGTCGAATGGACCCCACAGGTA
GATGGCACCTTCGTAACCCTCACGTCGCCGCCTTCATCGACGACCTCTCC
CACGCCATCCAACTCGGCGATATCTCCGACGTCGACTACTACCTGTCCCG
CAGAATCGCCCTCAACACCTGCGACCGCGAGGGCAACTCCCTGCTCCACC
TAGCACTAGTCTCCGGCCACTTGGACATCGCCCGTCTCCTCCTCGACAGA
GGCGCCAGCCCCCTATACAGCTTTGACCCGGAAGTCCCTGAGCTCGACCA
ACTCTTCCAATGCCCCAGCCGCGTTGCGCCCCAGCTCAGTTCCATCCGCG
TCGACATCCTCCGTCTGCTGCTCAGATACGGCGCCCCTATCCGCCGCTTC
CCCACCCTCAACGTCCTCTTCGACTCCCCCGGATACGCCAACGAACTCCT
CGGTCTGCTCCTCGATAGACATCCGGATATCCTCCACGAACGCTCCAAGT
CAGGCCACACCATCCTCCACTCCGCCGCTGCGCTCGGCACGCCCGAGGCA
TGCGAGTTGCTGCTTACTCGCGCGCCGCACCTCCGCACCACATATACAGA
CTGGGATGTGACGCCGCTGCACATGGCCATTCTGGAGAAAAATGAGCTGA
CAGCCTGCTTCCTCATATCGGCGGATATGACCCTGCAGATGCGCCACGGG
TACGACCGCACCGAGCTGTTCCTGGCGGCGTGTATGGGCCTGCGCCGCGT
CGTGAAGTTGTTGTTGTCTTCTACGGCGTTCTTTGCGTACCCGCCGCAGA
AGTGGGTTTCCGATGCGAAGGCTGCTGTCCGTGTGGCGCTGTATATGGGG
AATACGGAGGTGGTGGATATGATTAGACGGAATTTGGGATTGTATGTGTT
ACCTTTTCACCCCCTTCATGGAAAAGTATATGATGTAATATTGACTGATA
TATGTTGTGTGTAGATCATGGCACTCCTGTCTGTCTCAGTTTCTTACCCG
GCCCCGGCCTGTCCTGACCTCTACTAGCATTCGGGGGATTGAGACTAGGA
GGTCGAGGAGTAGACGGGCTAGGAGTGTGAGGGGTGATACTACTCCTCAT
CAACAGTGTTCTGTTGAGGCTGGGAGTTCGGCTGCGTCGCTGAGTGGGAA
TGTGAATGTGCCTGCTCCTTCTCATCCCCTCGCTACTGTAACCAATCCGG
GGACTGATAATCTTATGGACAGCGACGAGGGTGCGGTGGATGCTATGAGT
CTGGATGCCCAGGTTGATCGGTTTCTGCAAAGTGTTGGTGGTAATGAATG
TGGTAAGCTTGGGGTCATGGATACGGTAATGGAGAGCATTGAGGAGTCGT
AA
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Coding sequence (CDS) from alignment at An03:1245016..1246567-

>CBS51388_002828-T1 ID=CBS51388_002828-T1|Name=CBS51388_002828-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2958bp|location=Sequence derived from alignment at An03:1245016..1246567- (Aspergillus niger CBS 513.88)
ATCATGGCACTCCTGTCTGTCTCAGTTTCTTACCCGGCCCCGGCCTGTCC
TGACCTCTACTAGCATTCGGGGGATTGAGACTAGGAGGTCGAGGAGTAGA
CGGGCTAGGAGTGTGAGGGGTGATACTACTCCTCATCAACAGTGTTCTGT
TGAGGCTGGGAGTTCGGCTGCGTCGCTGAGTGGGAATGTGAATGTGCCTG
CTCCTTCTCATCCCCTCGCTACTGTAACCAATCCGGGGACTGATAATCTT
ATGGACAGCGACGAGGGTGCGGTGGATGCTATGAGTCTGGATGCCCAGGT
TGATCGGTTTCTGCAAAGTGTTGGTGGTAATGAATGTGGTAAGCTTGGGG
TCATGGATACGGTAATGGAGAGCATTGAGGAGTCGTAAATGCCTTGCACG
CCCAGCCCCTTCAAAGCCCCAGTGCCCAACACCAACCCGGCTCTGGAAGC
CGTGGCAGAGAAGCTTCGCGCCAGCGGCAGCAGAAGACTCCTCACCCCAG
AAGGCATCGGGGCGCTCTCCACCTCGACGAAGAACATCATCGACAATCTA
TATATCAATGTCCGAAAGAACTGCTGGGCAGACGCCATCTGCGAAACCCC
AGCAGGCCTCCGCTCTGGTCGAATGGACCCCACAGGTAGATGGCACCTTC
GTAACCCTCACGTCGCCGCCTTCATCGACGACCTCTCCCACGCCATCCAA
CTCGGCGATATCTCCGACGTCGACTACTACCTGTCCCGCAGAATCGCCCT
CAACACCTGCGACCGCGAGGGCAACTCCCTGCTCCACCTAGCACTAGTCT
CCGGCCACTTGGACATCGCCCGTCTCCTCCTCGACAGAGGCGCCAGCCCC
CTATACAGCTTTGACCCGGAAGTCCCTGAGCTCGACCAACTCTTCCAATG
CCCCAGCCGCGTTGCGCCCCAGCTCAGTTCCATCCGCGTCGACATCCTCC
GTCTGCTGCTCAGATACGGCGCCCCTATCCGCCGCTTCCCCACCCTCAAC
GTCCTCTTCGACTCCCCCGGATACGCCAACGAACTCCTCGGTCTGCTCCT
CGATAGACATCCGGATATCCTCCACGAACGCTCCAAGTCAGGCCACACCA
TCCTCCACTCCGCCGCTGCGCTCGGCACGCCCGAGGCATGCGAGTTGCTG
CTTACTCGCGCGCCGCACCTCCGCACCACATATACAGACTGGGATGTGAC
GCCGCTGCACATGGCCATTCTGGAGAAAAATGAGCTGACAGCCTGCTTCC
TCATATCGGCGGATATGACCCTGCAGATGCGCCACGGGTACGACCGCACC
GAGCTGTTCCTGGCGGCGTGTATGGGCCTGCGCCGCGTCGTGAAGTTGTT
GTTGTCTTCTACGGCGTTCTTTGCGTACCCGCCGCAGAAGTGGGTTTCCG
ATGCGAAGGCTGCTGTCCGTGTGGCGCTGTATATGGGGAATACGGAGGTG
GTGGATATGATTAGACGGAATTTGGGATTATCATGGCACTCCTGTCTGTC
TCAGTTTCTTACCCGGCCCCGGCCTGTCCTGACCTCTACTAGCATTCGGG
GGATTGAGACTAGGAGGTCGAGGAGTAGACGGGCTAGGAGTGTGAGGGGT
GATACTACTCCTCATCAACAGTGTTCTGTTGAGGCTGGGAGTTCGGCTGC
GTCGCTGAGTGGGAATGTGAATGTGCCTGCTCCTTCTCATCCCCTCGCTA
CTGTAACCAATCCGGGGACTGATAATCTTATGGACAGCGACGAGGGTGCG
GTGGATGCTATGAGTCTGGATGCCCAGGTTGATCGGTTTCTGCAAAGTGT
TGGTGGTAATGAATGTGGTAAGCTTGGGGTCATGGATACGGTAATGGAGA
GCATTGAGGAGTCGTAAATGCCTTGCACGCCCAGCCCCTTCAAAGCCCCA
GTGCCCAACACCAACCCGGCTCTGGAAGCCGTGGCAGAGAAGCTTCGCGC
CAGCGGCAGCAGAAGACTCCTCACCCCAGAAGGCATCGGGGCGCTCTCCA
CCTCGACGAAGAACATCATCGACAATCTATATATCAATGTCCGAAAGAAC
TGCTGGGCAGACGCCATCTGCGAAACCCCAGCAGGCCTCCGCTCTGGTCG
AATGGACCCCACAGGTAGATGGCACCTTCGTAACCCTCACGTCGCCGCCT
TCATCGACGACCTCTCCCACGCCATCCAACTCGGCGATATCTCCGACGTC
GACTACTACCTGTCCCGCAGAATCGCCCTCAACACCTGCGACCGCGAGGG
CAACTCCCTGCTCCACCTAGCACTAGTCTCCGGCCACTTGGACATCGCCC
GTCTCCTCCTCGACAGAGGCGCCAGCCCCCTATACAGCTTTGACCCGGAA
GTCCCTGAGCTCGACCAACTCTTCCAATGCCCCAGCCGCGTTGCGCCCCA
GCTCAGTTCCATCCGCGTCGACATCCTCCGTCTGCTGCTCAGATACGGCG
CCCCTATCCGCCGCTTCCCCACCCTCAACGTCCTCTTCGACTCCCCCGGA
TACGCCAACGAACTCCTCGGTCTGCTCCTCGATAGACATCCGGATATCCT
CCACGAACGCTCCAAGTCAGGCCACACCATCCTCCACTCCGCCGCTGCGC
TCGGCACGCCCGAGGCATGCGAGTTGCTGCTTACTCGCGCGCCGCACCTC
CGCACCACATATACAGACTGGGATGTGACGCCGCTGCACATGGCCATTCT
GGAGAAAAATGAGCTGACAGCCTGCTTCCTCATATCGGCGGATATGACCC
TGCAGATGCGCCACGGGTACGACCGCACCGAGCTGTTCCTGGCGGCGTGT
ATGGGCCTGCGCCGCGTCGTGAAGTTGTTGTTGTCTTCTACGGCGTTCTT
TGCGTACCCGCCGCAGAAGTGGGTTTCCGATGCGAAGGCTGCTGTCCGTG
TGGCGCTGTATATGGGGAATACGGAGGTGGTGGATATGATTAGACGGAAT
TTGGGATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002828CBS51388_002828Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002828-T1CBS51388_002828-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002828-T1.cdsCBS51388_002828-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002828-T1.exon2CBS51388_002828-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002828-T1.exon1CBS51388_002828-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:1245016..1246567 -
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