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Sequences
The following sequences are available for this feature:
mRNA from alignment at An03:1328170..1329030- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002861-T1 ID=CBS51388_002861-T1|Name=CBS51388_002861-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=861bp|location=Sequence derived from alignment at An03:1328170..1329030- (Aspergillus niger CBS 513.88)
ATGACGGCAAAGTGGCAAGTCACCCGTCTCCTTCACGGCGTCCGAGCCAT
CGTCGGCGGCCAAGGTCCTCCTGTGGTACTCATTCCCGGCTGGCCACAGA
CAGCAGAAGCATGGAGTGACATGTTCGAGCCCCTTTCCAAAAGTTACCAA
TTCTTCGCACTCGATCCCCCTGGCTTGGGTGAATCGCTTCCTCCCGCCAA
TGGCTATGATACTGCAAACGTCAGCAAGATCATGGCCGAAGCCATTCACG
ATGCTTTGAAGGAACAACCGTATCACCTAATTGGTCATGATGTGGGCGGA
TGGATCGCCTATCCCTGGGCCGCTCAGTTTCAATCCAGAATCAAGTCGCT
CAGTATCCTAGACGCTTCAGTGCCGGGTTTCTTGCCGCAATTTCAGTTCC
CATTGTCTCAGCAGACCAACTTGCGTCTCTGGCAATTCTCTTTCAACGCG
CTTCCCGAGTTACCTGAAATCCTGACGAGCGGCCGTGAGCGGGAGCTCTT
GACCTGGTTCTTCAATTTGAAGACGGTTCATCCCGATGGTATGCACAAAG
ATCATTTTGAACGCTATATCCAAGCCTATTCGCGACCAGGAGCAATGAGT
CGGGGCTTCGAGTACTATCGAGCTTTTGAGACGAGTTCGAAGCAGAACCT
GGAATTTGCAAAGACACCACTTGACATTCCTGTCTTGGCTTTGGGCGGAG
AGAGCTCTGTTGGTGCGGGTATGGTCGATTTGGTCCGGAAGTTCGCGACC
AATGTCTCAGGAGGCGCTATTCATGATTGTGGTCACTTTCTTCCCGAAGA
GCAACCATCTGCTGTTGCACAAAGTCTGCTGGAATTTTTGGACGCAAATC
AAAAGAAGTAA back to topCoding sequence (CDS) from alignment at An03:1328170..1329030- >CBS51388_002861-T1 ID=CBS51388_002861-T1|Name=CBS51388_002861-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=861bp|location=Sequence derived from alignment at An03:1328170..1329030- (Aspergillus niger CBS 513.88)
ATGACGGCAAAGTGGCAAGTCACCCGTCTCCTTCACGGCGTCCGAGCCAT
CGTCGGCGGCCAAGGTCCTCCTGTGGTACTCATTCCCGGCTGGCCACAGA
CAGCAGAAGCATGGAGTGACATGTTCGAGCCCCTTTCCAAAAGTTACCAA
TTCTTCGCACTCGATCCCCCTGGCTTGGGTGAATCGCTTCCTCCCGCCAA
TGGCTATGATACTGCAAACGTCAGCAAGATCATGGCCGAAGCCATTCACG
ATGCTTTGAAGGAACAACCGTATCACCTAATTGGTCATGATGTGGGCGGA
TGGATCGCCTATCCCTGGGCCGCTCAGTTTCAATCCAGAATCAAGTCGCT
CAGTATCCTAGACGCTTCAGTGCCGGGTTTCTTGCCGCAATTTCAGTTCC
CATTGTCTCAGCAGACCAACTTGCGTCTCTGGCAATTCTCTTTCAACGCG
CTTCCCGAGTTACCTGAAATCCTGACGAGCGGCCGTGAGCGGGAGCTCTT
GACCTGGTTCTTCAATTTGAAGACGGTTCATCCCGATGGTATGCACAAAG
ATCATTTTGAACGCTATATCCAAGCCTATTCGCGACCAGGAGCAATGAGT
CGGGGCTTCGAGTACTATCGAGCTTTTGAGACGAGTTCGAAGCAGAACCT
GGAATTTGCAAAGACACCACTTGACATTCCTGTCTTGGCTTTGGGCGGAG
AGAGCTCTGTTGGTGCGGGTATGGTCGATTTGGTCCGGAAGTTCGCGACC
AATGTCTCAGGAGGCGCTATTCATGATTGTGGTCACTTTCTTCCCGAAGA
GCAACCATCTGCTGTTGCACAAAGTCTGCTGGAATTTTTGGACGCAAATC
AAAAGAAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.9 |
| Note | MEROPS:MER0036053 |
| Note | SMCOG1262:haloalkane dehalogenase |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | InterPro:IPR000639 |
| DBxref | PFAM:PF12697 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An03 | supercontig | An03:1328170..1329030 - |
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