CBS51388_002866-T1, CBS51388_002866-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_002866-T1
Unique Name	CBS51388_002866-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An03:1343573..1345526+
coding sequence from alignment at An03:1343573..1345526+

mRNA from alignment at An03:1343573..1345526+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_002866-T1 ID=CBS51388_002866-T1|Name=CBS51388_002866-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1954bp|location=Sequence derived from alignment at An03:1343573..1345526+ (Aspergillus niger CBS 513.88)
ATGAACAATCCAGGAAAGTCAGGAGAAGCATTCGTGGAAGACCCCGAGTG
GCTGCTCTTGGGATCACCACGTCATCCTGGCCGCCGTGGCCGCCTTTATA
AAACTGGCGATCTAGTGCAATATAACGAGGATGGCAGTCTGACCTTCATG
GGGCGCAAAGATAACCAAGTCAAAATTCGTGGCCAGCGTGTAGAGCTCGG
CGATATTGAGTATCACGTTCTGGCTTCTTTGCCAACGAAGGCGATCAAGG
TTGTTGCCGAAGTCGTTGGACTTGAGAATGACGGAGAGCCGAAACCGGTG
CTAGTTGCTTTCATCCACATGGATAACAATGGCATGCCTGCCAGCAAGGA
ACCAGCAATGACTGCTAAGACATACCACCTGACCGATGTGGTCCGGGAGC
GGATTTCGCGTGAATTGTCAATTGTTCCAGACGTCTTTATCTCGATGTTG
GAACTCCCAGTAACATCTACTGGCAAGATAGACCGTAAACAGCTTCGTGA
CATCGGCCGCTCACTGCTCTTGAGTGAAGGGCATGTTTTTGATAACACAT
CTCATCTGTCGCTCAACGGTGACTTACGCAGTGAATTAATCCTGCATGAT
GAGCAACCTGCATATACACTAGCTCAAAAGGCGTATTCCATGCGTCCTGC
ATGGGTCAAGGGCTATTATCCACGCACAGAAGGCGGATTCAGAGATATTC
TTCTACATTCGTCTGGTTTGGACTCTGTCAACATGATGGAACTCACCTCA
TTCATTTCACGCCAGTTCAACATCCAAGTCGACATGCAGTATGTGGTGGC
TAAGTCTACCACTATCAGAAGCCTAGCCGAGTACGTGCTTCACTATCAAA
CGTGCAGTGCGGCCCCTTCCTCCAAATATAATTCAACAGGGATCGACCTC
ATGAGCGAGATCAACAGACATGACTCTGGGATTCGGGCTGCTCAGCTCAC
ACTTTCAGGCAGAAACAGCCCATCATTCGAACATTCATTTTGTAGAGATA
ACGGATCCTTCACTGTCTTCTTGACTGGCGCCAATGGTTTCCTGGGTACT
CAACTACTCCGCCAACTCCTGTCCCACCGCAATGTTAGCCGTGTCATCTG
TCTTGTTCGTGGTGATACAGACGCCGCTGCCAGACAGCGCACCATCAGTA
TCGCTAAAGAAGCCCTCTGGTGGACAGAGCACCACGCAGAGAAGCTAGAG
GTTTGGCGTGGAGATCTAGCATTACCCAAACTCGGACTTGACCCAAGCCG
CTGGGAAATACTCACTTGTGGTAAAGCAGTAGATGCCATCATACACAACG
GCGCCACCGTGCACTGGACGAAAAGCTACGAAGCTCTAGAGGCCGCCAAC
GTTGGATCAAGTATAGAACTTTTGCTAGTCGCACTGAGATGCCCCGCGAT
GAGGTTTTTATATATTACAGGTGGTCGTCCATGGAAGGCTCATGAGGAGG
GAGATGTTGTGGCGGAGCTGTCCGCTCCCGATGCCATTCCGTATAGCCAG
ACGAAGTTGATCTCCGAGGTTGTGATCAGGCGGGCCGCAACGCGCAGTTT
ACCAGGAACCTTTACTTCCGCTACACCAGACAAAGTTGCTGTTATAAACC
CAGGGTGGGTGATTGGAACACCAACCGAAGGTTATTCCAACACTACGGAC
TATATATGGCGGCTAGTGGCTACATGCGTCAAACTGGGTGTATATAACGC
CGACGACGCCGAGGGATGGCTATCCATTTCCGATGCTACTACTACTGCGG
AGGAAGTTCTCGAGGCAACATTCAGCACGAGAAGTGATATTCTAGGTGAT
GAATATGCTACACATGGCATGGCCTGGAGGGAGTTCTGGGCAATACTGGA
GGATATGGGGTACAAGCTGGAAGGAGTAAGTCTAGCTTCGTGGATGGATC
TTGTCGGAACAGATATAGAAGATGCAAGAGAGCAACACCCACTTTGGCCA
TTGA

Coding sequence (CDS) from alignment at An03:1343573..1345526+

>CBS51388_002866-T1 ID=CBS51388_002866-T1|Name=CBS51388_002866-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3822bp|location=Sequence derived from alignment at An03:1343573..1345526+ (Aspergillus niger CBS 513.88)
ATGAACAATCCAGGAAAGTCAGGAGAAGCATTCGTGGAAGACCCCGAGTG
GCTGCTCTTGGGATCACCACGTCATCCTGGCCGCCGTGGCCGCCTTTATA
AAACTGGCGATCTAGTGCAATATAACGAGGATGGCAGTCTGACCTTCATG
GGGCGCAAAGATAACCAAGTCAAAATTCGTGGCCAGCGTGTAGAGCTCGG
CGATATTGAGTATCACGTTCTGGCTTCTTTGCCAACGAAGGCGATCAAGG
TTGTTGCCGAAGTCGTTGGACTTGAGAATGACGGAGAGCCGAAACCGGTG
CTAGTTGCTTTCATCCACATGGATAACAATGGCATGCCTGCCAGCAAGGA
ACCAGCAATGACTGCTAAGACATACCACCTGACCGATGTGGTCCGGGAGC
GGATTTCGCGTGAATTGTCAATTGTTCCAGACGTCTTTATCTCGATGTTG
GAACTCCCAGTAACATCTACTGGCAAGATAGACCGTAAACAGCTTCGTGA
CATCGGCCGCTCACTGCTCTTGAGTGAAGGGCATGTTTTTGATAACACAT
CTCATCTGTCGCTCAACGGTGACTTACGCAGTGAATTAATCCTGCATGAT
GAGCAACCTGCATATACACTAGCTCAAAAGGCGTATTCCATGCGTCCTGC
ATGGGTCAAGGGCTATTATCCACGCACAGAAGGCGGATTCAGAGATATTC
TTCTACATTCGTCTGGTTTGGACTCTGTCAACATGATGGAACTCACCTCA
TTCATTTCACGCCAGTTCAACATCCAAGTCGACATGCAGTATGTGGTGGC
TAAGTCTACCACTATCAGAAGCCTAGCCGAGTACGTGCTTCACTATCAAA
CGTGCAGTGCGGCCCCTTCCTCCAAATATAATTCAACAGGGATCGACCTC
ATGAGCGAGATCAACAGACATGACTCTGGGATTCGGGCTGCTCAGCTCAC
ACTTTCAGGCAGAAACAGCCCATCATTCGAACATTCATTTTGTAGAGATA
ACGGATCCTTCACTGTCTTCTTGACTGGCGCCAATGGTTTCCTGGGTACT
CAACTACTCCGCCAACTCCTGTCCCACCGCAATGTTAGCCGTGTCATCTG
TCTTGTTCGTGGTGATACAGACGCCGCTGCCAGACAGCGCACCATCAGTA
TCGCTAAAGAAGCCCTCTGGTGGACAGAGCACCACGCAGAGAAGCTAGAG
GTTTGGCGTGGAGATCTAGCATTACCCAAACTCGGACTTGACCCAAGCCG
CTGGGAAATACTCACTTGTGGTAAAGCAGTAGATGCCATCATACACAACG
GCGCCACCGTGCACTGGACGAAAAGCTACGAAGCTCTAGAGGCCGCCAAC
GTTGGATCAAGTATAGAACTTTTGCTAGTCGCACTGAGATGCCCCGCGAT
GAGGTTTTTATATATTACAGGTGGTCGTCCATGGAAGGCTCATGAGGAGG
GAGATGTTGTGGCGGAGCTGTCCGCTCCCGATGCCATTCCGTATAGCCAG
ACGAAGTTGATCTCCGAGGTTGTGATCAGGCGGGCCGCAACGCGCAGTTT
ACCAGGAACCTTTACTTCCGCTACACCAGACAAAGTTGCTGTTATAAACC
CAGGGTGGGTGATTGGAACACCAACCGAAGGTTATTCCAACACTACGGAC
TATATATGGCGGCTAGTGGCTACATGCGTCAAACTGGGTGTATATAACGC
CGACGACGCCGAGGGATGGCTATCCATTTCCGATGCTACTACTACTGCGG
AGGAAGTTCTCGAGGCAACATTCAGCACGAGAAGTGATATTCTAGGTGAT
GAATATGCTACACATGGCATGGCCTGGAGGGAGTTCTGGGCAATACTGGA
GGATATGGGGTACAAGCTGGAAGGAAAGATGCAAGAGAGCAACACCCACT
TTGGCCATTGAATGAACAATCCAGGAAAGTCAGGAGAAGCATTCGTGGAA
GACCCCGAGTGGCTGCTCTTGGGATCACCACGTCATCCTGGCCGCCGTGG
CCGCCTTTATAAAACTGGCGATCTAGTGCAATATAACGAGGATGGCAGTC
TGACCTTCATGGGGCGCAAAGATAACCAAGTCAAAATTCGTGGCCAGCGT
GTAGAGCTCGGCGATATTGAGTATCACGTTCTGGCTTCTTTGCCAACGAA
GGCGATCAAGGTTGTTGCCGAAGTCGTTGGACTTGAGAATGACGGAGAGC
CGAAACCGGTGCTAGTTGCTTTCATCCACATGGATAACAATGGCATGCCT
GCCAGCAAGGAACCAGCAATGACTGCTAAGACATACCACCTGACCGATGT
GGTCCGGGAGCGGATTTCGCGTGAATTGTCAATTGTTCCAGACGTCTTTA
TCTCGATGTTGGAACTCCCAGTAACATCTACTGGCAAGATAGACCGTAAA
CAGCTTCGTGACATCGGCCGCTCACTGCTCTTGAGTGAAGGGCATGTTTT
TGATAACACATCTCATCTGTCGCTCAACGGTGACTTACGCAGTGAATTAA
TCCTGCATGATGAGCAACCTGCATATACACTAGCTCAAAAGGCGTATTCC
ATGCGTCCTGCATGGGTCAAGGGCTATTATCCACGCACAGAAGGCGGATT
CAGAGATATTCTTCTACATTCGTCTGGTTTGGACTCTGTCAACATGATGG
AACTCACCTCATTCATTTCACGCCAGTTCAACATCCAAGTCGACATGCAG
TATGTGGTGGCTAAGTCTACCACTATCAGAAGCCTAGCCGAGTACGTGCT
TCACTATCAAACGTGCAGTGCGGCCCCTTCCTCCAAATATAATTCAACAG
GGATCGACCTCATGAGCGAGATCAACAGACATGACTCTGGGATTCGGGCT
GCTCAGCTCACACTTTCAGGCAGAAACAGCCCATCATTCGAACATTCATT
TTGTAGAGATAACGGATCCTTCACTGTCTTCTTGACTGGCGCCAATGGTT
TCCTGGGTACTCAACTACTCCGCCAACTCCTGTCCCACCGCAATGTTAGC
CGTGTCATCTGTCTTGTTCGTGGTGATACAGACGCCGCTGCCAGACAGCG
CACCATCAGTATCGCTAAAGAAGCCCTCTGGTGGACAGAGCACCACGCAG
AGAAGCTAGAGGTTTGGCGTGGAGATCTAGCATTACCCAAACTCGGACTT
GACCCAAGCCGCTGGGAAATACTCACTTGTGGTAAAGCAGTAGATGCCAT
CATACACAACGGCGCCACCGTGCACTGGACGAAAAGCTACGAAGCTCTAG
AGGCCGCCAACGTTGGATCAAGTATAGAACTTTTGCTAGTCGCACTGAGA
TGCCCCGCGATGAGGTTTTTATATATTACAGGTGGTCGTCCATGGAAGGC
TCATGAGGAGGGAGATGTTGTGGCGGAGCTGTCCGCTCCCGATGCCATTC
CGTATAGCCAGACGAAGTTGATCTCCGAGGTTGTGATCAGGCGGGCCGCA
ACGCGCAGTTTACCAGGAACCTTTACTTCCGCTACACCAGACAAAGTTGC
TGTTATAAACCCAGGGTGGGTGATTGGAACACCAACCGAAGGTTATTCCA
ACACTACGGACTATATATGGCGGCTAGTGGCTACATGCGTCAAACTGGGT
GTATATAACGCCGACGACGCCGAGGGATGGCTATCCATTTCCGATGCTAC
TACTACTGCGGAGGAAGTTCTCGAGGCAACATTCAGCACGAGAAGTGATA
TTCTAGGTGATGAATATGCTACACATGGCATGGCCTGGAGGGAGTTCTGG
GCAATACTGGAGGATATGGGGTACAAGCTGGAAGGAAAGATGCAAGAGAG
CAACACCCACTTTGGCCATTGA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_002866	CBS51388_002866	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_002866-T1.exon1	CBS51388_002866-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_002866-T1.exon2	CBS51388_002866-T1.exon2	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_002866-T1.cds	CBS51388_002866-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_002866-T1	CBS51388_002866-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
Note	antiSMASH:Cluster_3.9
DBxref	InterPro:IPR036291
DBxref	InterPro:IPR013120
DBxref	InterPro:IPR009081
DBxref	InterPro:IPR036736
DBxref	PFAM:PF00550
DBxref	PFAM:PF07993
DBxref	PFAM:PF01370
Product	putative secondary metabolism biosynthetic enzyme

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An03	supercontig	An03:1343573..1345526 +

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CBS51388_002866-T1, CBS51388_002866-T1 (mRNA) Aspergillus niger CBS 513.88