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CBS51388_002894-T1, CBS51388_002894-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002894-T1
Unique NameCBS51388_002894-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:1443625..1444424+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002894-T1 ID=CBS51388_002894-T1|Name=CBS51388_002894-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=800bp|location=Sequence derived from alignment at An03:1443625..1444424+ (Aspergillus niger CBS 513.88)
ATGGGTCCGCTAAGCGACCCCCAGCAGACAGGCGAAAGTCTATCAGACGG
CACAGAAAAGTTCGAAGACCTAGTTTGCCGTCACTGGTTCACACAACCTG
AGGCGCCAGGCACGGATCATGAGTTGCGAGATCAAGCATCAAGAGCTACC
GTTGATGAACCATACCGACAAAGTTTGACCGAGCGCCTACAATATCATGT
TCCAACGGACCCGTTGCCCTCGACAGATTTCCTAGTATGTATCAGCCGAC
GTATTCCCCTGCGTAGCTGACGTTTTCAGAATATGTGCATACAGATGTAC
TTTGCTAGATTCAACCCCATATTCCCTGTAGTCCATGCGCCAACATTCCG
ACCTTCAACTGAGAACGCTTTGCTGTTACTTTCAATTTGCTCAATCGGCA
GTCTGTTTCTAGGCACCAGACATGGTATTTCCTGTGGCACTAGGATATTC
GAAACCCTCAACAAGGCGATCCTAGCATCCGTAAGTTTGGTTATTCCTTA
AGTTGGGGAAATGTGCCTTTCATTAATACTCATAGTGGGAGACATACATT
GCAAAGGGAGAGCCCGAAATCCGGTCTATGTCCCAGGCGGCTTTGATAGG
CCAGGTATTTGGTTATTTAAGCGGGGTAAGTAAGTCTACATTAACGACCA
CATCTCACAGTCTGACGTATGGAAGAAGCCTAGACATCTCCTGCTGATTC
AGGTTTTCCATGGTACCATAATCACGGTATGCTTACCCTATGATAGTGAT
TTGGAATACTAATTCAGCCAGTGGGTTCGGAGAATTCGGGTGCTTCGTAG
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Coding sequence (CDS) from alignment at An03:1443625..1444424+

>CBS51388_002894-T1 ID=CBS51388_002894-T1|Name=CBS51388_002894-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3120bp|location=Sequence derived from alignment at An03:1443625..1444424+ (Aspergillus niger CBS 513.88)
ATGGGTCCGCTAAGCGACCCCCAGCAGACAGGCGAAAGTCTATCAGACGG
CACAGAAAAGTTCGAAGACCTAGTTTGCCGTCACTGGTTCACACAACCTG
AGGCGCCAGGCACGGATCATGAGTTGCGAGATCAAGCATCAAGAGCTACC
GTTGATGAACCATACCGACAAAGTTTGACCGAGCGCCTACAATATCATGT
TCCAACGGACCCGTTGCCCTCGACAGATTTCCTAAATATGTGCATACAGA
TGTACTTTGCTAGATTCAACCCCATATTCCCTGTAGTCCATGCGCCAACA
TTCCGACCTTCAACTGAGAACGCTTTGCTGTTACTTTCAATTTGCTCAAT
CGGCAGTCTGTTTCTAGGCACCAGACATGGTATTTCCTGTGGCACTAGGA
TATTCGAAACCCTCAACAAGGCGATCCTAGCATCCTGGGAGACATACATT
GCAAAGGGAGAGCCCGAAATCCGGTCTATGTCCCAGGCGGCTTTGATAGG
CCAGGTATTTGGTTATTTAAGCGGGTCTGACGTATGGAAGAAGCCTAGAC
ATCTCCTGCTGATTCAGGTTTTCCATGGTACCATAATCACGCCAGTGGGT
TCGGAGAATTCGGGTGCTTCGTAGATGGGTCCGCTAAGCGACCCCCAGCA
GACAGGCGAAAGTCTATCAGACGGCACAGAAAAGTTCGAAGACCTAGTTT
GCCGTCACTGGTTCACACAACCTGAGGCGCCAGGCACGGATCATGAGTTG
CGAGATCAAGCATCAAGAGCTACCGTTGATGAACCATACCGACAAAGTTT
GACCGAGCGCCTACAATATCATGTTCCAACGGACCCGTTGCCCTCGACAG
ATTTCCTAAATATGTGCATACAGATGTACTTTGCTAGATTCAACCCCATA
TTCCCTGTAGTCCATGCGCCAACATTCCGACCTTCAACTGAGAACGCTTT
GCTGTTACTTTCAATTTGCTCAATCGGCAGTCTGTTTCTAGGCACCAGAC
ATGGTATTTCCTGTGGCACTAGGATATTCGAAACCCTCAACAAGGCGATC
CTAGCATCCTGGGAGACATACATTGCAAAGGGAGAGCCCGAAATCCGGTC
TATGTCCCAGGCGGCTTTGATAGGCCAGGTATTTGGTTATTTAAGCGGGT
CTGACGTATGGAAGAAGCCTAGACATCTCCTGCTGATTCAGGTTTTCCAT
GGTACCATAATCACGCCAGTGGGTTCGGAGAATTCGGGTGCTTCGTAGAT
GGGTCCGCTAAGCGACCCCCAGCAGACAGGCGAAAGTCTATCAGACGGCA
CAGAAAAGTTCGAAGACCTAGTTTGCCGTCACTGGTTCACACAACCTGAG
GCGCCAGGCACGGATCATGAGTTGCGAGATCAAGCATCAAGAGCTACCGT
TGATGAACCATACCGACAAAGTTTGACCGAGCGCCTACAATATCATGTTC
CAACGGACCCGTTGCCCTCGACAGATTTCCTAAATATGTGCATACAGATG
TACTTTGCTAGATTCAACCCCATATTCCCTGTAGTCCATGCGCCAACATT
CCGACCTTCAACTGAGAACGCTTTGCTGTTACTTTCAATTTGCTCAATCG
GCAGTCTGTTTCTAGGCACCAGACATGGTATTTCCTGTGGCACTAGGATA
TTCGAAACCCTCAACAAGGCGATCCTAGCATCCTGGGAGACATACATTGC
AAAGGGAGAGCCCGAAATCCGGTCTATGTCCCAGGCGGCTTTGATAGGCC
AGGTATTTGGTTATTTAAGCGGGTCTGACGTATGGAAGAAGCCTAGACAT
CTCCTGCTGATTCAGGTTTTCCATGGTACCATAATCACGCCAGTGGGTTC
GGAGAATTCGGGTGCTTCGTAGATGGGTCCGCTAAGCGACCCCCAGCAGA
CAGGCGAAAGTCTATCAGACGGCACAGAAAAGTTCGAAGACCTAGTTTGC
CGTCACTGGTTCACACAACCTGAGGCGCCAGGCACGGATCATGAGTTGCG
AGATCAAGCATCAAGAGCTACCGTTGATGAACCATACCGACAAAGTTTGA
CCGAGCGCCTACAATATCATGTTCCAACGGACCCGTTGCCCTCGACAGAT
TTCCTAAATATGTGCATACAGATGTACTTTGCTAGATTCAACCCCATATT
CCCTGTAGTCCATGCGCCAACATTCCGACCTTCAACTGAGAACGCTTTGC
TGTTACTTTCAATTTGCTCAATCGGCAGTCTGTTTCTAGGCACCAGACAT
GGTATTTCCTGTGGCACTAGGATATTCGAAACCCTCAACAAGGCGATCCT
AGCATCCTGGGAGACATACATTGCAAAGGGAGAGCCCGAAATCCGGTCTA
TGTCCCAGGCGGCTTTGATAGGCCAGGTATTTGGTTATTTAAGCGGGTCT
GACGTATGGAAGAAGCCTAGACATCTCCTGCTGATTCAGGTTTTCCATGG
TACCATAATCACGCCAGTGGGTTCGGAGAATTCGGGTGCTTCGTAGATGG
GTCCGCTAAGCGACCCCCAGCAGACAGGCGAAAGTCTATCAGACGGCACA
GAAAAGTTCGAAGACCTAGTTTGCCGTCACTGGTTCACACAACCTGAGGC
GCCAGGCACGGATCATGAGTTGCGAGATCAAGCATCAAGAGCTACCGTTG
ATGAACCATACCGACAAAGTTTGACCGAGCGCCTACAATATCATGTTCCA
ACGGACCCGTTGCCCTCGACAGATTTCCTAAATATGTGCATACAGATGTA
CTTTGCTAGATTCAACCCCATATTCCCTGTAGTCCATGCGCCAACATTCC
GACCTTCAACTGAGAACGCTTTGCTGTTACTTTCAATTTGCTCAATCGGC
AGTCTGTTTCTAGGCACCAGACATGGTATTTCCTGTGGCACTAGGATATT
CGAAACCCTCAACAAGGCGATCCTAGCATCCTGGGAGACATACATTGCAA
AGGGAGAGCCCGAAATCCGGTCTATGTCCCAGGCGGCTTTGATAGGCCAG
GTATTTGGTTATTTAAGCGGGTCTGACGTATGGAAGAAGCCTAGACATCT
CCTGCTGATTCAGGTTTTCCATGGTACCATAATCACGCCAGTGGGTTCGG
AGAATTCGGGTGCTTCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002894CBS51388_002894Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002894-T1CBS51388_002894-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002894-T1.exon1CBS51388_002894-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002894-T1.exon2CBS51388_002894-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002894-T1.exon3CBS51388_002894-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002894-T1.exon4CBS51388_002894-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_002894-T1.exon5CBS51388_002894-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002894-T1.cdsCBS51388_002894-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
DBxrefInterPro:IPR007219
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:1443625..1444424 +
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