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CBS51388_002968-T1, CBS51388_002968-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002968-T1
Unique NameCBS51388_002968-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:33107..34104-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002968-T1 ID=CBS51388_002968-T1|Name=CBS51388_002968-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=998bp|location=Sequence derived from alignment at An04:33107..34104- (Aspergillus niger CBS 513.88)
ATGTCCCCTCGTATGCCCCGGAAGCTTTCCCAGCTTCCCCTGACGACAAT
CTGGGCGTCTCAATTCCCGACTTCTTCCATCCGCAGCAGCCAATTGTCCA
TCACCTCAGTCCGCTCCTTCGGTATCCGGTCCTTGAACCCCCCGGAGACT
TCGCGCTTCAACGTCAGCCATGACCTGCCCGTGCTGAAATCGACACCCAC
CGCCGCCCTCGAGCGCAAGGCCAACACCCTTCCCCTGCGGACCGGTGCCA
TCACCTTCAAGAAGGGCATGACCGCCCTGTATGACCCCGAGACCGGCAAA
CGTGTTCCCTGCACCGTGCTGCAGCTCGATCGAGTCGAAGTCGTCTCGCA
CAAGACTCGCCAGAAGCATGGATACTATGCTGTTCAGCTGGGTGCTGGAT
GGAGGCGTCCCGATAACTTGACCAAGTCCCTGCTCGGTCATTTCACTGCC
AATGGCATCTCGCCCAAGCGTCATGTCTATGAGTTCCGGGTTAAGGATGA
GAGCGGGCTTTTGCCTGTTGGGCAGACTGTCAGTGCGGACTGGTTTCAGG
AGGGACAGTTCGTTGATGCGAGGTCTGATACGAAGGGTAAGGGCTTCGCG
GGTGTTATGAAGAGACATGGTTTCGGTGGTCAGGATCGCAGTCACGGTGT
ATCCTTGACGCATCGTTCGCTTGGTTCCGCTGGTCCTAGTCAGGGTGGTG
GTTCTCGTGTTTACCCTGGAAAGAAGATGGCGGGTAACATGGGTAATGAG
CAGAACACGGTTCAGAATCTGAGGATTTTGAAGGTGGACGCTGAGAATGG
AATTGTTGTGGTCAATGGTAGGATACCCCGAAATACTCCTCTGTTTAAGT
GGATTTCATATATGTAAAAGTTGATGCTGACTTTTGGGTTTTAATAGGAT
CCGTCAGTGGTCCCAAGGGCTGCGTTGTCCGGATACAGGATGCTATTAAG
AAGCCGTGGCCGGAAGCTTCCCCTGCGACTACTGAGGCTTCTGAATAA
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Coding sequence (CDS) from alignment at An04:33107..34104-

>CBS51388_002968-T1 ID=CBS51388_002968-T1|Name=CBS51388_002968-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1836bp|location=Sequence derived from alignment at An04:33107..34104- (Aspergillus niger CBS 513.88)
GATCCGTCAGTGGTCCCAAGGGCTGCGTTGTCCGGATACAGGATGCTATT
AAGAAGCCGTGGCCGGAAGCTTCCCCTGCGACTACTGAGGCTTCTGAATA
AATGTCCCCTCGTATGCCCCGGAAGCTTTCCCAGCTTCCCCTGACGACAA
TCTGGGCGTCTCAATTCCCGACTTCTTCCATCCGCAGCAGCCAATTGTCC
ATCACCTCAGTCCGCTCCTTCGGTATCCGGTCCTTGAACCCCCCGGAGAC
TTCGCGCTTCAACGTCAGCCATGACCTGCCCGTGCTGAAATCGACACCCA
CCGCCGCCCTCGAGCGCAAGGCCAACACCCTTCCCCTGCGGACCGGTGCC
ATCACCTTCAAGAAGGGCATGACCGCCCTGTATGACCCCGAGACCGGCAA
ACGTGTTCCCTGCACCGTGCTGCAGCTCGATCGAGTCGAAGTCGTCTCGC
ACAAGACTCGCCAGAAGCATGGATACTATGCTGTTCAGCTGGGTGCTGGA
TGGAGGCGTCCCGATAACTTGACCAAGTCCCTGCTCGGTCATTTCACTGC
CAATGGCATCTCGCCCAAGCGTCATGTCTATGAGTTCCGGGTTAAGGATG
AGAGCGGGCTTTTGCCTGTTGGGCAGACTGTCAGTGCGGACTGGTTTCAG
GAGGGACAGTTCGTTGATGCGAGGTCTGATACGAAGGGTAAGGGCTTCGC
GGGTGTTATGAAGAGACATGGTTTCGGTGGTCAGGATCGCAGTCACGGTG
TATCCTTGACGCATCGTTCGCTTGGTTCCGCTGGTCCTAGTCAGGGTGGT
GGTTCTCGTGTTTACCCTGGAAAGAAGATGGCGGGTAACATGGGTAATGA
GCAGAACACGGTTCAGAATCTGAGGATTTTGAAGGTGGACGCTGAGAATG
GAATTGTTGTGGTCAATGGATCCGTCAGTGGTCCCAAGGGCTGCGTTGTC
CGGATACAGGATGCTATTAAGAAGCCGTGGCCGGAAGCTTCCCCTGCGAC
TACTGAGGCTTCTGAATAAATGTCCCCTCGTATGCCCCGGAAGCTTTCCC
AGCTTCCCCTGACGACAATCTGGGCGTCTCAATTCCCGACTTCTTCCATC
CGCAGCAGCCAATTGTCCATCACCTCAGTCCGCTCCTTCGGTATCCGGTC
CTTGAACCCCCCGGAGACTTCGCGCTTCAACGTCAGCCATGACCTGCCCG
TGCTGAAATCGACACCCACCGCCGCCCTCGAGCGCAAGGCCAACACCCTT
CCCCTGCGGACCGGTGCCATCACCTTCAAGAAGGGCATGACCGCCCTGTA
TGACCCCGAGACCGGCAAACGTGTTCCCTGCACCGTGCTGCAGCTCGATC
GAGTCGAAGTCGTCTCGCACAAGACTCGCCAGAAGCATGGATACTATGCT
GTTCAGCTGGGTGCTGGATGGAGGCGTCCCGATAACTTGACCAAGTCCCT
GCTCGGTCATTTCACTGCCAATGGCATCTCGCCCAAGCGTCATGTCTATG
AGTTCCGGGTTAAGGATGAGAGCGGGCTTTTGCCTGTTGGGCAGACTGTC
AGTGCGGACTGGTTTCAGGAGGGACAGTTCGTTGATGCGAGGTCTGATAC
GAAGGGTAAGGGCTTCGCGGGTGTTATGAAGAGACATGGTTTCGGTGGTC
AGGATCGCAGTCACGGTGTATCCTTGACGCATCGTTCGCTTGGTTCCGCT
GGTCCTAGTCAGGGTGGTGGTTCTCGTGTTTACCCTGGAAAGAAGATGGC
GGGTAACATGGGTAATGAGCAGAACACGGTTCAGAATCTGAGGATTTTGA
AGGTGGACGCTGAGAATGGAATTGTTGTGGTCAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002968CBS51388_002968Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002968-T1CBS51388_002968-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002968-T1.cdsCBS51388_002968-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002968-T1.exon2CBS51388_002968-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002968-T1.exon1CBS51388_002968-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG092642CB
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR019926
DBxrefInterPro:IPR019927
DBxrefInterPro:IPR000597
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:33107..34104 -
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