|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:66480..67776- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002976-T1 ID=CBS51388_002976-T1|Name=CBS51388_002976-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1297bp|location=Sequence derived from alignment at An04:66480..67776- (Aspergillus niger CBS 513.88)
ATGGTATGTCCCCAACTCACCCCAATGGTCCCAGGCGATTTGCCCATGAC
TATTGCTAACGTCCAGGGAACTAGGCTGCTCAAGTAATCTCCAATTCCGG
ACACGATGAGATGATTGTACGTGAACCGAGACAGAATCCTCCTACGCCAT
CGTGACAATGGCTTCATCCCTTTCTGCCTGGCCCCTGAGACTGACCGCAG
CGCATAGCACGATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACAT
GTTCATCGGACAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACAT
CGGTTGATTGAGACATTGAAGGGGTGAGGATCCTGATGCCTGGTCATCTT
ACGCGCCATCGTCTCTAACCTCCGTCCGTGTGTGAGCAGACATGAAGGAG
CTGTGTGGTGTGTGGCTTGGGTACGTCATAATGGCTTTCATTGTCAAGCT
GTCCTATTCAACTATGTATCTGACTCTGGTCTTCTCTAGGCGCACCCTAA
GTTCGGAACTATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCT
GGCGCGAACAACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGG
ACGAAGGTGTTCGACTTCTCTCTACACACCGCTTCAGTGAACATGGTCTC
CTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACG
GACATGTTAGCGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAGATC
TTCCACGCCCACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGC
CGCCCCGGGCAGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGA
GATTCGTCACTGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTACAAG
TATGCACCATGAACCGCTTCCCACTGATACTCTGCTTTCAATTGAACTAA
GCTGACCCTTACACCTCTACAGCCCGGAAACCAAGACCTACAACAACACG
CAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGCTTGGTCGCC
TAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAGACAAGACAG
TCAGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGGACCAGCCAG
CAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAGCCCTAGTGG
AAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCTTGTGGAAGG
AAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAGGAGTAG back to topCoding sequence (CDS) from alignment at An04:66480..67776- >CBS51388_002976-T1 ID=CBS51388_002976-T1|Name=CBS51388_002976-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5562bp|location=Sequence derived from alignment at An04:66480..67776- (Aspergillus niger CBS 513.88)
CCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGGCCACTCCG
ACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCAAGTCCTAC
ATCGCCTCTGCCTCTCAAGACAAGACAGTCAGGATCTGGACTTCCGATGC
GTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGACACTGTAC
TCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTGTGAGCGGT
GGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGGCAATGGGA
GAAGGTAAAGGATATCGAGGAGTAGGCGCACCCTAAGTTCGGAACTATCC
TCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCGAACAACAC
CAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAGGTGTTCGA
CTTCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGCTCCGCATG
AAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATGTTAGCGTT
CTTGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCACGCCCACGG
TATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCCGGGCAGCT
TGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCGTCACTGGT
GGAAGCGACAACCTGCTGAAGATCTGGGACTACAAACATGAAGGAGCTGT
GTGGTGTGTGGCTTGGCACGATGCCGGCCTGGACTACTACGGCCGCAGAT
TGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGAAATCGAAGGA
GAGACACATCGGTTGATTGAGACATTGAAGGGGCTGCTCAAGTAATCTCC
AATTCCGGACACGATGAGATGATTATGCCCGGAAACCAAGACCTACAACA
ACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGCTTGG
TCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAGACAA
GACAGTCAGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGGACCA
GCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAGCCCT
AGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCTTGTG
GAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAGGAGT
AGGCGCACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGTACGATGGA
AAGGTGCTCATCTGGCGCGAACAACACCAGAACGCCACGTCACCCGTCGC
TGGCGGCGCTTGGACGAAGGTGTTCGACTTCTCTCTACACACCGCTTCAG
TGAACATGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGCTTGC
GCCTCCTCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGACAATAGCTG
GACTCACCAGATCTTCCACGCCCACGGTATGGGCGTGAACTCTATCAGCT
GGGCACCTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACCCTGGACCG
GGCCAGCAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTGCTGAAGAT
CTGGGACTACAAACATGAAGGAGCTGTGTGGTGTGTGGCTTGGCACGATG
CCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCATCGGACAAA
ACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTGATTGAGAC
ATTGAAGGGGCTGCTCAAGTAATCTCCAATTCCGGACACGATGAGATGAT
TATGCCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGGCCAC
TCCGACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCAAGTC
CTACATCGCCTCTGCCTCTCAAGACAAGACAGTCAGGATCTGGACTTCCG
ATGCGTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGACACT
GTACTCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTGTGAG
CGGTGGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGGCAAT
GGGAGAAGGTAAAGGATATCGAGGAGTAGGCGCACCCTAAGTTCGGAACT
ATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCGAACA
ACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAGGTGT
TCGACTTCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGCTCCG
CATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATGTTAG
CGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCACGCCC
ACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCCGGGC
AGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCGTCAC
TGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTACAAACATGAAGGAG
CTGTGTGGTGTGTGGCTTGGCACGATGCCGGCCTGGACTACTACGGCCGC
AGATTGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGAAATCGA
AGGAGAGACACATCGGTTGATTGAGACATTGAAGGGGCTGCTCAAGTAAT
CTCCAATTCCGGACACGATGAGATGATTATGCCCGGAAACCAAGACCTAC
AACAACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGC
TTGGTCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAG
ACAAGACAGTCAGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGG
ACCAGCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAG
CCCTAGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCT
TGTGGAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAG
GAGTAGGCGCACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGTACGA
TGGAAAGGTGCTCATCTGGCGCGAACAACACCAGAACGCCACGTCACCCG
TCGCTGGCGGCGCTTGGACGAAGGTGTTCGACTTCTCTCTACACACCGCT
TCAGTGAACATGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGC
TTGCGCCTCCTCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGACAATA
GCTGGACTCACCAGATCTTCCACGCCCACGGTATGGGCGTGAACTCTATC
AGCTGGGCACCTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACCCTGG
ACCGGGCCAGCAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTGCTGA
AGATCTGGGACTACAAACATGAAGGAGCTGTGTGGTGTGTGGCTTGGCAC
GATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCATCGGA
CAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTGATTG
AGACATTGAAGGGGCTGCTCAAGTAATCTCCAATTCCGGACACGATGAGA
TGATTATGCCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGG
CCACTCCGACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCA
AGTCCTACATCGCCTCTGCCTCTCAAGACAAGACAGTCAGGATCTGGACT
TCCGATGCGTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGA
CACTGTACTCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTG
TGAGCGGTGGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGG
CAATGGGAGAAGGTAAAGGATATCGAGGAGTAGGCGCACCCTAAGTTCGG
AACTATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCG
AACAACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAG
GTGTTCGACTTCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGC
TCCGCATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATG
TTAGCGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCAC
GCCCACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCC
GGGCAGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCG
TCACTGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTACAAACATGAA
GGAGCTGTGTGGTGTGTGGCTTGGCACGATGCCGGCCTGGACTACTACGG
CCGCAGATTGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGAAA
TCGAAGGAGAGACACATCGGTTGATTGAGACATTGAAGGGGCTGCTCAAG
TAATCTCCAATTCCGGACACGATGAGATGATTATGCCCGGAAACCAAGAC
CTACAACAACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATG
TCGCTTGGTCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCT
CAAGACAAGACAGTCAGGATCTGGACTTCCGATGCGTCAAACCCTGGTCA
GTGGACCAGCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCT
GGAGCCCTAGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTC
AGCTTGTGGAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATAT
CGAGGAGTAGGCGCACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGT
ACGATGGAAAGGTGCTCATCTGGCGCGAACAACACCAGAACGCCACGTCA
CCCGTCGCTGGCGGCGCTTGGACGAAGGTGTTCGACTTCTCTCTACACAC
CGCTTCAGTGAACATGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCC
TCGCTTGCGCCTCCTCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGAC
AATAGCTGGACTCACCAGATCTTCCACGCCCACGGTATGGGCGTGAACTC
TATCAGCTGGGCACCTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACC
CTGGACCGGGCCAGCAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTG
CTGAAGATCTGGGACTACAAACATGAAGGAGCTGTGTGGTGTGTGGCTTG
GCACGATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCAT
CGGACAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTG
ATTGAGACATTGAAGGGGCTGCTCAAGTAATCTCCAATTCCGGACACGAT
GAGATGATTATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| Product | GTPase-activating protein S13 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:66480..67776 - |
|
