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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:145179..146709- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003001-T1 ID=CBS51388_003001-T1|Name=CBS51388_003001-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1531bp|location=Sequence derived from alignment at An04:145179..146709- (Aspergillus niger CBS 513.88)
ATGGCCCCCGACAAGAAGGACAAGAAGCGCAAGGGTATGTATTGTTACAC
CATTTGAGAGATTTTCATTCTCAACCCGTTGGTACGCCTACTGACGCTGC
TCAGCTGCCGCCGCCGCTGCCGCCGATTCGCCCGCAAAGAAGACCAAGAA
GGTCGAGGCCAAGCCTGCCGAATCCCCCAAGGACGCCCCCAAGTCTATCC
TCAAGAAGGCCAACCAAAAAGAGTCGGCTGCAAAGACCGATGGCGCTTCG
AAGGCGAAGGCCAATGGCCAGCCCGCCAGACAGATCAAGCCTCGCAAGCG
TGCGGCCGATTTCCTGAGCGACAACGACAACAGTGACTCCGAGGCGGAAG
TTGCTGAGACCAAGGTTCAGAAGGAGGAGAAGCCTACCACCAAAAAGTCG
AAGAAGGAGGACGGAACTGCTGCTCCTGCGACAAAATCCAAGCCCGCCAA
AACCAACACGAAGGCTAAGAAGGCAGAGCCTGTCCCTGAAGAATCTGAAG
AGGAAGACGAGTCCGCCGCCTCGGATGCTAGTCAGAGTGAGGATGAGGAG
GACGACCGCACAGCCGCCCTTATCAAGGGCTTTGAGAGCAGTGGCAATGA
GGATGAGTCTGGCGATGAAGGCTTCAACCCCGACCAGCCGGTCCCTAAGA
TCCCCGATTCGAAGAAGGCCAAGCGCAAGATCTTGAAGAAGCAGAAGGAG
AATGCCGGTCAAGCAGAGGAGCCTGGAACGGTTTACGTTGGGTAAGTTGA
ACCGTCAGGAAGTTCGTTTGTGACTACTATTGACACGCTATGCTACAGAC
GCATTCCCCACGGTTTCTACGAACACCAGATGCGCGCCTACTTCAGCCAG
TTCGGTGACATTACCCGCCTGCGTCTCTCCCGTAACCGTATCACCGGTCG
CTCCAAGCACTATGCTTTCATCGAGTTCGCATCTACCTCTGTCGCTAAGA
TTGTCGCTGCCACCATGGACAACTACCTCATGTACGGTCACATCCTGAAG
TGCAAATACGTGTCCCCCGAACAGCTCCACCCGGAGGTCTGGAAGGGTGC
CAACAGACGGTTCAAGCGCACCCCCTGGAACCGCATCGAGAAGAAGCGTC
TGGACAAGGGCAAGACGAGAGAGCAGTGGACGGAGCGCATTGAGAGGGAG
CAGAAGAGACGCCTCGCCAAGGTCGAGAAGCTCAAGGCTATCATGGGCTA
CGACCTCGACATTCCGCAACTGAAGAGCGTGGATGAGGTTCCTGTCCAGG
AGGCCAAGGCGATCGAGGCATCTGAGCCCGCTGCTGAAGAACCCGCCAAG
GCTATTGAGGCTGCCCCGGTCGAGGAGCCCAAGGCCGAGAAGCCCGCTGA
AGATACCCCTAAGAAGACCAACAAGAAGACCAAGAAGGCTGCTCAGTCCC
CTGCTGTGCAGGAGACTCCCAAGTCGGCAGAGAAGTCTACCCCGAAGAAG
ACCACCGAAGAAGCTGCTTCCCCAGCCGCTCAGAAGGCCAAGAAGGTCCA
GAAGAAGACCAAGGCCAAGTCTAAGGCTTAG back to topCoding sequence (CDS) from alignment at An04:145179..146709- >CBS51388_003001-T1 ID=CBS51388_003001-T1|Name=CBS51388_003001-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4212bp|location=Sequence derived from alignment at An04:145179..146709- (Aspergillus niger CBS 513.88)
ACGCATTCCCCACGGTTTCTACGAACACCAGATGCGCGCCTACTTCAGCC
AGTTCGGTGACATTACCCGCCTGCGTCTCTCCCGTAACCGTATCACCGGT
CGCTCCAAGCACTATGCTTTCATCGAGTTCGCATCTACCTCTGTCGCTAA
GATTGTCGCTGCCACCATGGACAACTACCTCATGTACGGTCACATCCTGA
AGTGCAAATACGTGTCCCCCGAACAGCTCCACCCGGAGGTCTGGAAGGGT
GCCAACAGACGGTTCAAGCGCACCCCCTGGAACCGCATCGAGAAGAAGCG
TCTGGACAAGGGCAAGACGAGAGAGCAGTGGACGGAGCGCATTGAGAGGG
AGCAGAAGAGACGCCTCGCCAAGGTCGAGAAGCTCAAGGCTATCATGGGC
TACGACCTCGACATTCCGCAACTGAAGAGCGTGGATGAGGTTCCTGTCCA
GGAGGCCAAGGCGATCGAGGCATCTGAGCCCGCTGCTGAAGAACCCGCCA
AGGCTATTGAGGCTGCCCCGGTCGAGGAGCCCAAGGCCGAGAAGCCCGCT
GAAGATACCCCTAAGAAGACCAACAAGAAGACCAAGAAGGCTGCTCAGTC
CCCTGCTGTGCAGGAGACTCCCAAGTCGGCAGAGAAGTCTACCCCGAAGA
AGACCACCGAAGAAGCTGCTTCCCCAGCCGCTCAGAAGGCCAAGAAGGTC
CAGAAGAAGACCAAGGCCAAGTCTAAGGCTTAGCTGCCGCCGCCGCTGCC
GCCGATTCGCCCGCAAAGAAGACCAAGAAGGTCGAGGCCAAGCCTGCCGA
ATCCCCCAAGGACGCCCCCAAGTCTATCCTCAAGAAGGCCAACCAAAAAG
AGTCGGCTGCAAAGACCGATGGCGCTTCGAAGGCGAAGGCCAATGGCCAG
CCCGCCAGACAGATCAAGCCTCGCAAGCGTGCGGCCGATTTCCTGAGCGA
CAACGACAACAGTGACTCCGAGGCGGAAGTTGCTGAGACCAAGGTTCAGA
AGGAGGAGAAGCCTACCACCAAAAAGTCGAAGAAGGAGGACGGAACTGCT
GCTCCTGCGACAAAATCCAAGCCCGCCAAAACCAACACGAAGGCTAAGAA
GGCAGAGCCTGTCCCTGAAGAATCTGAAGAGGAAGACGAGTCCGCCGCCT
CGGATGCTAGTCAGAGTGAGGATGAGGAGGACGACCGCACAGCCGCCCTT
ATCAAGGGCTTTGAGAGCAGTGGCAATGAGGATGAGTCTGGCGATGAAGG
CTTCAACCCCGACCAGCCGGTCCCTAAGATCCCCGATTCGAAGAAGGCCA
AGCGCAAGATCTTGAAGAAGCAGAAGGAGAATGCCGGTCAAGCAGAGGAG
CCTGGAACGGTTTACGTTGGATGGCCCCCGACAAGAAGGACAAGAAGCGC
AAGGACGCATTCCCCACGGTTTCTACGAACACCAGATGCGCGCCTACTTC
AGCCAGTTCGGTGACATTACCCGCCTGCGTCTCTCCCGTAACCGTATCAC
CGGTCGCTCCAAGCACTATGCTTTCATCGAGTTCGCATCTACCTCTGTCG
CTAAGATTGTCGCTGCCACCATGGACAACTACCTCATGTACGGTCACATC
CTGAAGTGCAAATACGTGTCCCCCGAACAGCTCCACCCGGAGGTCTGGAA
GGGTGCCAACAGACGGTTCAAGCGCACCCCCTGGAACCGCATCGAGAAGA
AGCGTCTGGACAAGGGCAAGACGAGAGAGCAGTGGACGGAGCGCATTGAG
AGGGAGCAGAAGAGACGCCTCGCCAAGGTCGAGAAGCTCAAGGCTATCAT
GGGCTACGACCTCGACATTCCGCAACTGAAGAGCGTGGATGAGGTTCCTG
TCCAGGAGGCCAAGGCGATCGAGGCATCTGAGCCCGCTGCTGAAGAACCC
GCCAAGGCTATTGAGGCTGCCCCGGTCGAGGAGCCCAAGGCCGAGAAGCC
CGCTGAAGATACCCCTAAGAAGACCAACAAGAAGACCAAGAAGGCTGCTC
AGTCCCCTGCTGTGCAGGAGACTCCCAAGTCGGCAGAGAAGTCTACCCCG
AAGAAGACCACCGAAGAAGCTGCTTCCCCAGCCGCTCAGAAGGCCAAGAA
GGTCCAGAAGAAGACCAAGGCCAAGTCTAAGGCTTAGCTGCCGCCGCCGC
TGCCGCCGATTCGCCCGCAAAGAAGACCAAGAAGGTCGAGGCCAAGCCTG
CCGAATCCCCCAAGGACGCCCCCAAGTCTATCCTCAAGAAGGCCAACCAA
AAAGAGTCGGCTGCAAAGACCGATGGCGCTTCGAAGGCGAAGGCCAATGG
CCAGCCCGCCAGACAGATCAAGCCTCGCAAGCGTGCGGCCGATTTCCTGA
GCGACAACGACAACAGTGACTCCGAGGCGGAAGTTGCTGAGACCAAGGTT
CAGAAGGAGGAGAAGCCTACCACCAAAAAGTCGAAGAAGGAGGACGGAAC
TGCTGCTCCTGCGACAAAATCCAAGCCCGCCAAAACCAACACGAAGGCTA
AGAAGGCAGAGCCTGTCCCTGAAGAATCTGAAGAGGAAGACGAGTCCGCC
GCCTCGGATGCTAGTCAGAGTGAGGATGAGGAGGACGACCGCACAGCCGC
CCTTATCAAGGGCTTTGAGAGCAGTGGCAATGAGGATGAGTCTGGCGATG
AAGGCTTCAACCCCGACCAGCCGGTCCCTAAGATCCCCGATTCGAAGAAG
GCCAAGCGCAAGATCTTGAAGAAGCAGAAGGAGAATGCCGGTCAAGCAGA
GGAGCCTGGAACGGTTTACGTTGGATGGCCCCCGACAAGAAGGACAAGAA
GCGCAAGGACGCATTCCCCACGGTTTCTACGAACACCAGATGCGCGCCTA
CTTCAGCCAGTTCGGTGACATTACCCGCCTGCGTCTCTCCCGTAACCGTA
TCACCGGTCGCTCCAAGCACTATGCTTTCATCGAGTTCGCATCTACCTCT
GTCGCTAAGATTGTCGCTGCCACCATGGACAACTACCTCATGTACGGTCA
CATCCTGAAGTGCAAATACGTGTCCCCCGAACAGCTCCACCCGGAGGTCT
GGAAGGGTGCCAACAGACGGTTCAAGCGCACCCCCTGGAACCGCATCGAG
AAGAAGCGTCTGGACAAGGGCAAGACGAGAGAGCAGTGGACGGAGCGCAT
TGAGAGGGAGCAGAAGAGACGCCTCGCCAAGGTCGAGAAGCTCAAGGCTA
TCATGGGCTACGACCTCGACATTCCGCAACTGAAGAGCGTGGATGAGGTT
CCTGTCCAGGAGGCCAAGGCGATCGAGGCATCTGAGCCCGCTGCTGAAGA
ACCCGCCAAGGCTATTGAGGCTGCCCCGGTCGAGGAGCCCAAGGCCGAGA
AGCCCGCTGAAGATACCCCTAAGAAGACCAACAAGAAGACCAAGAAGGCT
GCTCAGTCCCCTGCTGTGCAGGAGACTCCCAAGTCGGCAGAGAAGTCTAC
CCCGAAGAAGACCACCGAAGAAGCTGCTTCCCCAGCCGCTCAGAAGGCCA
AGAAGGTCCAGAAGAAGACCAAGGCCAAGTCTAAGGCTTAGCTGCCGCCG
CCGCTGCCGCCGATTCGCCCGCAAAGAAGACCAAGAAGGTCGAGGCCAAG
CCTGCCGAATCCCCCAAGGACGCCCCCAAGTCTATCCTCAAGAAGGCCAA
CCAAAAAGAGTCGGCTGCAAAGACCGATGGCGCTTCGAAGGCGAAGGCCA
ATGGCCAGCCCGCCAGACAGATCAAGCCTCGCAAGCGTGCGGCCGATTTC
CTGAGCGACAACGACAACAGTGACTCCGAGGCGGAAGTTGCTGAGACCAA
GGTTCAGAAGGAGGAGAAGCCTACCACCAAAAAGTCGAAGAAGGAGGACG
GAACTGCTGCTCCTGCGACAAAATCCAAGCCCGCCAAAACCAACACGAAG
GCTAAGAAGGCAGAGCCTGTCCCTGAAGAATCTGAAGAGGAAGACGAGTC
CGCCGCCTCGGATGCTAGTCAGAGTGAGGATGAGGAGGACGACCGCACAG
CCGCCCTTATCAAGGGCTTTGAGAGCAGTGGCAATGAGGATGAGTCTGGC
GATGAAGGCTTCAACCCCGACCAGCCGGTCCCTAAGATCCCCGATTCGAA
GAAGGCCAAGCGCAAGATCTTGAAGAAGCAGAAGGAGAATGCCGGTCAAG
CAGAGGAGCCTGGAACGGTTTACGTTGGATGGCCCCCGACAAGAAGGACA
AGAAGCGCAAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264T8I |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:145179..146709 - |
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