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CBS51388_003002-T1, CBS51388_003002-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003002-T1
Unique NameCBS51388_003002-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:146939..147620+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003002-T1 ID=CBS51388_003002-T1|Name=CBS51388_003002-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=682bp|location=Sequence derived from alignment at An04:146939..147620+ (Aspergillus niger CBS 513.88)
ATGGGGAAATCGGCAAAGGCGAATAAACCCCTCACCCAGGAAGAGATCTG
GGATGATTCTGCCCTTGTCCAGAGCTGGGATGAGGCTGTCGAGGAATACA
AAGTATGCGCTTCCTCCCCGCGCACGTGATCCGTTCGCTGACCCGAACAT
AACAGCTCTACCACAGCATCCATGCGAAGGGGGAGAATGTTGAAGATGTC
CTGAGGGAAGCAGAGGCTGCTGAGAAAGCTGAGGTGGAGCAAGATGAGCA
GCCGTTGGACGAGTCGGCCGACCGCATGGATGCCGATGTCGACGCCGACA
CTACTGCCAATGCAACAACTCCAGCCGAACCTCAACAGGTGTCACAGGCC
AAAATGTCGCAGGTGAGTTACTCAGTTTGCCGGATGAATCTACTAGGCTG
ACTTCATTCTAGGCTGCGGAAGGGCCAGAACAACCCTTTGTACAGGGTGC
CCAGGTCACGGAGCAAACGGCCGGGCCCAGTCCCGTAGGAGCGCCTCCTA
TGCCTCATGCCACCCTATCACAAGGTAAGATGCATTGCCTCCTTTTTACA
CTCTGGAGAAACTGACTTCCTTTAGTGCAAGACGAAGGACTCAAAAACCT
CATGATGGCTTGGTACTATGCTGGATACTACACTGGTCTATATGAGGGCC
AACAGCGAGCAAACCAGAACAGGAGCTCATAA
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Coding sequence (CDS) from alignment at An04:146939..147620+

>CBS51388_003002-T1 ID=CBS51388_003002-T1|Name=CBS51388_003002-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2112bp|location=Sequence derived from alignment at An04:146939..147620+ (Aspergillus niger CBS 513.88)
ATGGGGAAATCGGCAAAGGCGAATAAACCCCTCACCCAGGAAGAGATCTG
GGATGATTCTGCCCTTGTCCAGAGCTGGGATGAGGCTGTCGAGGAATACA
AACTCTACCACAGCATCCATGCGAAGGGGGAGAATGTTGAAGATGTCCTG
AGGGAAGCAGAGGCTGCTGAGAAAGCTGAGGTGGAGCAAGATGAGCAGCC
GTTGGACGAGTCGGCCGACCGCATGGATGCCGATGTCGACGCCGACACTA
CTGCCAATGCAACAACTCCAGCCGAACCTCAACAGGTGTCACAGGCCAAA
ATGTCGCAGGCTGCGGAAGGGCCAGAACAACCCTTTGTACAGGGTGCCCA
GGTCACGGAGCAAACGGCCGGGCCCAGTCCCGTAGGAGCGCCTCCTATGC
CTCATGCCACCCTATCACAAGTGCAAGACGAAGGACTCAAAAACCTCATG
ATGGCTTGGTACTATGCTGGATACTACACTGGTCTATATGAGGGCCAACA
GCGAGCAAACCAGAACAGGAGCTCATAAATGGGGAAATCGGCAAAGGCGA
ATAAACCCCTCACCCAGGAAGAGATCTGGGATGATTCTGCCCTTGTCCAG
AGCTGGGATGAGGCTGTCGAGGAATACAAACTCTACCACAGCATCCATGC
GAAGGGGGAGAATGTTGAAGATGTCCTGAGGGAAGCAGAGGCTGCTGAGA
AAGCTGAGGTGGAGCAAGATGAGCAGCCGTTGGACGAGTCGGCCGACCGC
ATGGATGCCGATGTCGACGCCGACACTACTGCCAATGCAACAACTCCAGC
CGAACCTCAACAGGTGTCACAGGCCAAAATGTCGCAGGCTGCGGAAGGGC
CAGAACAACCCTTTGTACAGGGTGCCCAGGTCACGGAGCAAACGGCCGGG
CCCAGTCCCGTAGGAGCGCCTCCTATGCCTCATGCCACCCTATCACAAGT
GCAAGACGAAGGACTCAAAAACCTCATGATGGCTTGGTACTATGCTGGAT
ACTACACTGGTCTATATGAGGGCCAACAGCGAGCAAACCAGAACAGGAGC
TCATAAATGGGGAAATCGGCAAAGGCGAATAAACCCCTCACCCAGGAAGA
GATCTGGGATGATTCTGCCCTTGTCCAGAGCTGGGATGAGGCTGTCGAGG
AATACAAACTCTACCACAGCATCCATGCGAAGGGGGAGAATGTTGAAGAT
GTCCTGAGGGAAGCAGAGGCTGCTGAGAAAGCTGAGGTGGAGCAAGATGA
GCAGCCGTTGGACGAGTCGGCCGACCGCATGGATGCCGATGTCGACGCCG
ACACTACTGCCAATGCAACAACTCCAGCCGAACCTCAACAGGTGTCACAG
GCCAAAATGTCGCAGGCTGCGGAAGGGCCAGAACAACCCTTTGTACAGGG
TGCCCAGGTCACGGAGCAAACGGCCGGGCCCAGTCCCGTAGGAGCGCCTC
CTATGCCTCATGCCACCCTATCACAAGTGCAAGACGAAGGACTCAAAAAC
CTCATGATGGCTTGGTACTATGCTGGATACTACACTGGTCTATATGAGGG
CCAACAGCGAGCAAACCAGAACAGGAGCTCATAAATGGGGAAATCGGCAA
AGGCGAATAAACCCCTCACCCAGGAAGAGATCTGGGATGATTCTGCCCTT
GTCCAGAGCTGGGATGAGGCTGTCGAGGAATACAAACTCTACCACAGCAT
CCATGCGAAGGGGGAGAATGTTGAAGATGTCCTGAGGGAAGCAGAGGCTG
CTGAGAAAGCTGAGGTGGAGCAAGATGAGCAGCCGTTGGACGAGTCGGCC
GACCGCATGGATGCCGATGTCGACGCCGACACTACTGCCAATGCAACAAC
TCCAGCCGAACCTCAACAGGTGTCACAGGCCAAAATGTCGCAGGCTGCGG
AAGGGCCAGAACAACCCTTTGTACAGGGTGCCCAGGTCACGGAGCAAACG
GCCGGGCCCAGTCCCGTAGGAGCGCCTCCTATGCCTCATGCCACCCTATC
ACAAGTGCAAGACGAAGGACTCAAAAACCTCATGATGGCTTGGTACTATG
CTGGATACTACACTGGTCTATATGAGGGCCAACAGCGAGCAAACCAGAAC
AGGAGCTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003002CBS51388_003002Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003002-T1.exon1CBS51388_003002-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003002-T1.exon2CBS51388_003002-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003002-T1.exon3CBS51388_003002-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_003002-T1.exon4CBS51388_003002-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003002-T1.cdsCBS51388_003002-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003002-T1CBS51388_003002-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010304
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:146939..147620 +
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