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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:170655..172524- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003009-T1 ID=CBS51388_003009-T1|Name=CBS51388_003009-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1870bp|location=Sequence derived from alignment at An04:170655..172524- (Aspergillus niger CBS 513.88)
ATGGACCATAAGATCGACACCCTCGCCACCCTCCACAACTGGACCCAAGG
CACCCCATCCCTCTACCCTTTCACGGGCATCATTCAACTCTGTCTAGCGG
AGGAGATCTCCGTTGCCACGGCAGTAGAAGAAATAAGTGCATTTATTAAC
GGAAAGGGAGAAGGAATAGGTATACTCCTATCCTATCATATCATATTACA
TATATCATATACACCGTGATGCTAATAAAGTACATACAGATGAATGCGTC
CACGACCTATGGGCAAGTATTCTACACACGGGGAGATGTTTACCCTCCAC
AAACATCATCTCAGCTAATGCTGATCCCACCATCCCCAACGGTAATGGCA
GCAACGCAAAGAAAGAAACCATCGACACCGACATCTCAACCCACCAAACA
CCCACCCCGCCTCAAAAGAAACTAATCGCCTTGATGCACGCGATCAAAAA
TATGCCCGATGTGCATGTGCATATCCGTACACGTGCGCAGTCAAGGTACT
CTTGGTCTTCTTCTTCGCAGATGTATTCCGCAAGTAGGGATAGATATTCT
TTCTACAGTAATACCAATGAAAATATTACTGAGAAGAATGAAAATGAACC
TACAAATGAAGAGAACAATAATGGAAAGGAAGATGAAGGAGAATCCACCG
AAGAAGAAGAACTCTACCACCCGTCTTTGGGTGTATATCTCGATGGGACG
GTGGGTGGATCGCCTTATCTTCGCCATTTACATGATTCGGTGTCTACACC
CGCTCCTTCTACACCAGCTCCTCCCCTACCTACTCCTGTATCTTCAGAAC
CAAAGAAGAACACCAACGAACCCCATCCCCAACCTCACGAAAAGAATCGA
CCCAAACCACCCAAACTCCCCTCCTCAGCATCTGACACTACCATCCGGCC
TACGAAAACCAAGTCTCTAGTATGGGCCTATCTACCGCAATTCAAAGACG
TGGTGGAGTCTATATTCCATGATTTTGGGAAAACACTCGGTACCGACATT
ACTCCTTTCCCACATATACAACCTTATCATCAACCTCCTCATCAACCTCC
TCAAAAAATACATCCAAAGGATCAACAGGTCCTCTACCAAGCATGGATCA
ACTTCATCACCTTCCTCGCATTCCTCGCCAGGGAAGGAGTATTACGGTCT
CCTGACGATCTCAATTCAGGGTATGAGTATGGGTTCGATGAGTTTGATTG
GGGATTCAATGATAATAATAATATTATTAATAATGATTTTGGGGATGGAG
TCGGGTCATGGATCGATGATCTGGCGATTTCTTGTCTTCGGGTACTTAAC
AACAACAACAACAACAATCCCCACCATCAGAATCATCACGATAACAATAA
GGAACAAATCCATCTGCAAAGAAATACCCAAATCCTCACAGCAACGACCC
TCGCCCTCCTCTACGGCGAACATCTCTGGCGGAGACGGGGCGATCGATCC
CATCCCTCACCTCCTACCCATCAACAACAACAACAAGAGAAAATACAAGA
AAAAGAAAAGAAAGAAGAAGAGAAGGAAAACTACATCGTAGCAGGTCTGA
CTCTCGACGAATTCGAATCAGGGTCTGTATCAGCATCTACATCCACCTCT
GCAGCTAATTCTCCGCCTTTGGCTCCATCACCACAGCCACAGAATACTGA
GGATGTGAGTGAGGAGGGTAGGGGGAGGTTTATTACGAGGAAGATGTGGG
AATCGTGGATTCGGAGGTTCAATGAACTTGCGGGGGATTTGGGGATGGAG
ATGGGGTTGTGGGATGAGACGAGGGAGGGGGCGTGGTTGGCGGGGGAGGA
GTTGAGGAGGGTTTGTTCTGTTCATCATCATCATCATCATCATAGTGGTC
ATGGGAATGATAAGTAGTGA back to topCoding sequence (CDS) from alignment at An04:170655..172524- >CBS51388_003009-T1 ID=CBS51388_003009-T1|Name=CBS51388_003009-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5229bp|location=Sequence derived from alignment at An04:170655..172524- (Aspergillus niger CBS 513.88)
TGAATGAATGCGTCCACGACCTATGGGCAAGTATTCTACACACGGGGAGA
TGTTTACCCTCCACAAACATCATCTCAGCTAATGCTGATCCCACCATCCC
CAACGGTAATGGCAGCAACGCAAAGAAAGAAACCATCGACACCGACATCT
CAACCCACCAAACACCCACCCCGCCTCAAAAGAAACTAATCGCCTTGATG
CACGCGATCAAAAATATGCCCGATGTGCATGTGCATATCCGTACACGTGC
GCAGTCAAGGTACTCTTGGTCTTCTTCTTCGCAGATGTATTCCGCAAGTA
GGGATAGATATTCTTTCTACAGTAATACCAATGAAAATATTACTGAGAAG
AATGAAAATGAACCTACAAATGAAGAGAACAATAATGGAAAGGAAGATGA
AGGAGAATCCACCGAAGAAGAAGAACTCTACCACCCGTCTTTGGGTGTAT
ATCTCGATGGGACGGTGGGTGGATCGCCTTATCTTCGCCATTTACATGAT
TCGGTGTCTACACCCGCTCCTTCTACACCAGCTCCTCCCCTACCTACTCC
TGTATCTTCAGAACCAAAGAAGAACACCAACGAACCCCATCCCCAACCTC
ACGAAAAGAATCGACCCAAACCACCCAAACTCCCCTCCTCAGCATCTGAC
ACTACCATCCGGCCTACGAAAACCAAGTCTCTAGTATGGGCCTATCTACC
GCAATTCAAAGACGTGGTGGAGTCTATATTCCATGATTTTGGGAAAACAC
TCGGTACCGACATTACTCCTTTCCCACATATACAACCTTATCATCAACCT
CCTCATCAACCTCCTCAAAAAATACATCCAAAGGATCAACAGGTCCTCTA
CCAAGCATGGATCAACTTCATCACCTTCCTCGCATTCCTCGCCAGGGAAG
GAGTATTACGGTCTCCTGACGATCTCAATTCAGGGTATGAGTATGGGTTC
GATGAGTTTGATTGGGGATTCAATGATAATAATAATATTATTAATAATGA
TTTTGGGGATGGAGTCGGGTCATGGATCGATGATCTGGCGATTTCTTGTC
TTCGGGTACTTAACAACAACAACAACAACAATCCCCACCATCAGAATCAT
CACGATAACAATAAGGAACAAATCCATCTGCAAAGAAATACCCAAATCCT
CACAGCAACGACCCTCGCCCTCCTCTACGGCGAACATCTCTGGCGGAGAC
GGGGCGATCGATCCCATCCCTCACCTCCTACCCATCAACAACAACAACAA
GAGAAAATACAAGAAAAAGAAAAGAAAGAAGAAGAGAAGGAAAACTACAT
CGTAGCAGGTCTGACTCTCGACGAATTCGAATCAGGGTCTGTATCAGCAT
CTACATCCACCTCTGCAGCTAATTCTCCGCCTTTGGCTCCATCACCACAG
CCACAGAATACTGAGGATGTGAGTGAGGAGGGTAGGGGGAGGTTTATTAC
GAGGAAGATGTGGGAATCGTGGATTCGGAGGTTCAATGAACTTGCGGGGG
ATTTGGGGATGGAGATGGGGTTGTGGGATGAGACGAGGGAGGGGGCGTGG
TTGGCGGGGGAGGAGTTGAGGAGGATGGACCATAAGATCGACACCCTCGC
CACCCTCCACAACTGGACCCAAGGCACCCCATCCCTCTACCCTTTCACGG
GCATCATTCAACTCTGTCTAGCGGAGGAGATCTCCGTTGCCACGGCAGTA
GAAGAAATAAGTGCATTTATTAACGGAAAGGGAGAAGGAATAGTGAATGA
ATGCGTCCACGACCTATGGGCAAGTATTCTACACACGGGGAGATGTTTAC
CCTCCACAAACATCATCTCAGCTAATGCTGATCCCACCATCCCCAACGGT
AATGGCAGCAACGCAAAGAAAGAAACCATCGACACCGACATCTCAACCCA
CCAAACACCCACCCCGCCTCAAAAGAAACTAATCGCCTTGATGCACGCGA
TCAAAAATATGCCCGATGTGCATGTGCATATCCGTACACGTGCGCAGTCA
AGGTACTCTTGGTCTTCTTCTTCGCAGATGTATTCCGCAAGTAGGGATAG
ATATTCTTTCTACAGTAATACCAATGAAAATATTACTGAGAAGAATGAAA
ATGAACCTACAAATGAAGAGAACAATAATGGAAAGGAAGATGAAGGAGAA
TCCACCGAAGAAGAAGAACTCTACCACCCGTCTTTGGGTGTATATCTCGA
TGGGACGGTGGGTGGATCGCCTTATCTTCGCCATTTACATGATTCGGTGT
CTACACCCGCTCCTTCTACACCAGCTCCTCCCCTACCTACTCCTGTATCT
TCAGAACCAAAGAAGAACACCAACGAACCCCATCCCCAACCTCACGAAAA
GAATCGACCCAAACCACCCAAACTCCCCTCCTCAGCATCTGACACTACCA
TCCGGCCTACGAAAACCAAGTCTCTAGTATGGGCCTATCTACCGCAATTC
AAAGACGTGGTGGAGTCTATATTCCATGATTTTGGGAAAACACTCGGTAC
CGACATTACTCCTTTCCCACATATACAACCTTATCATCAACCTCCTCATC
AACCTCCTCAAAAAATACATCCAAAGGATCAACAGGTCCTCTACCAAGCA
TGGATCAACTTCATCACCTTCCTCGCATTCCTCGCCAGGGAAGGAGTATT
ACGGTCTCCTGACGATCTCAATTCAGGGTATGAGTATGGGTTCGATGAGT
TTGATTGGGGATTCAATGATAATAATAATATTATTAATAATGATTTTGGG
GATGGAGTCGGGTCATGGATCGATGATCTGGCGATTTCTTGTCTTCGGGT
ACTTAACAACAACAACAACAACAATCCCCACCATCAGAATCATCACGATA
ACAATAAGGAACAAATCCATCTGCAAAGAAATACCCAAATCCTCACAGCA
ACGACCCTCGCCCTCCTCTACGGCGAACATCTCTGGCGGAGACGGGGCGA
TCGATCCCATCCCTCACCTCCTACCCATCAACAACAACAACAAGAGAAAA
TACAAGAAAAAGAAAAGAAAGAAGAAGAGAAGGAAAACTACATCGTAGCA
GGTCTGACTCTCGACGAATTCGAATCAGGGTCTGTATCAGCATCTACATC
CACCTCTGCAGCTAATTCTCCGCCTTTGGCTCCATCACCACAGCCACAGA
ATACTGAGGATGTGAGTGAGGAGGGTAGGGGGAGGTTTATTACGAGGAAG
ATGTGGGAATCGTGGATTCGGAGGTTCAATGAACTTGCGGGGGATTTGGG
GATGGAGATGGGGTTGTGGGATGAGACGAGGGAGGGGGCGTGGTTGGCGG
GGGAGGAGTTGAGGAGGATGGACCATAAGATCGACACCCTCGCCACCCTC
CACAACTGGACCCAAGGCACCCCATCCCTCTACCCTTTCACGGGCATCAT
TCAACTCTGTCTAGCGGAGGAGATCTCCGTTGCCACGGCAGTAGAAGAAA
TAAGTGCATTTATTAACGGAAAGGGAGAAGGAATAGTGAATGAATGCGTC
CACGACCTATGGGCAAGTATTCTACACACGGGGAGATGTTTACCCTCCAC
AAACATCATCTCAGCTAATGCTGATCCCACCATCCCCAACGGTAATGGCA
GCAACGCAAAGAAAGAAACCATCGACACCGACATCTCAACCCACCAAACA
CCCACCCCGCCTCAAAAGAAACTAATCGCCTTGATGCACGCGATCAAAAA
TATGCCCGATGTGCATGTGCATATCCGTACACGTGCGCAGTCAAGGTACT
CTTGGTCTTCTTCTTCGCAGATGTATTCCGCAAGTAGGGATAGATATTCT
TTCTACAGTAATACCAATGAAAATATTACTGAGAAGAATGAAAATGAACC
TACAAATGAAGAGAACAATAATGGAAAGGAAGATGAAGGAGAATCCACCG
AAGAAGAAGAACTCTACCACCCGTCTTTGGGTGTATATCTCGATGGGACG
GTGGGTGGATCGCCTTATCTTCGCCATTTACATGATTCGGTGTCTACACC
CGCTCCTTCTACACCAGCTCCTCCCCTACCTACTCCTGTATCTTCAGAAC
CAAAGAAGAACACCAACGAACCCCATCCCCAACCTCACGAAAAGAATCGA
CCCAAACCACCCAAACTCCCCTCCTCAGCATCTGACACTACCATCCGGCC
TACGAAAACCAAGTCTCTAGTATGGGCCTATCTACCGCAATTCAAAGACG
TGGTGGAGTCTATATTCCATGATTTTGGGAAAACACTCGGTACCGACATT
ACTCCTTTCCCACATATACAACCTTATCATCAACCTCCTCATCAACCTCC
TCAAAAAATACATCCAAAGGATCAACAGGTCCTCTACCAAGCATGGATCA
ACTTCATCACCTTCCTCGCATTCCTCGCCAGGGAAGGAGTATTACGGTCT
CCTGACGATCTCAATTCAGGGTATGAGTATGGGTTCGATGAGTTTGATTG
GGGATTCAATGATAATAATAATATTATTAATAATGATTTTGGGGATGGAG
TCGGGTCATGGATCGATGATCTGGCGATTTCTTGTCTTCGGGTACTTAAC
AACAACAACAACAACAATCCCCACCATCAGAATCATCACGATAACAATAA
GGAACAAATCCATCTGCAAAGAAATACCCAAATCCTCACAGCAACGACCC
TCGCCCTCCTCTACGGCGAACATCTCTGGCGGAGACGGGGCGATCGATCC
CATCCCTCACCTCCTACCCATCAACAACAACAACAAGAGAAAATACAAGA
AAAAGAAAAGAAAGAAGAAGAGAAGGAAAACTACATCGTAGCAGGTCTGA
CTCTCGACGAATTCGAATCAGGGTCTGTATCAGCATCTACATCCACCTCT
GCAGCTAATTCTCCGCCTTTGGCTCCATCACCACAGCCACAGAATACTGA
GGATGTGAGTGAGGAGGGTAGGGGGAGGTTTATTACGAGGAAGATGTGGG
AATCGTGGATTCGGAGGTTCAATGAACTTGCGGGGGATTTGGGGATGGAG
ATGGGGTTGTGGGATGAGACGAGGGAGGGGGCGTGGTTGGCGGGGGAGGA
GTTGAGGAGGATGGACCATAAGATCGACACCCTCGCCACCCTCCACAACT
GGACCCAAGGCACCCCATCCCTCTACCCTTTCACGGGCATCATTCAACTC
TGTCTAGCGGAGGAGATCTCCGTTGCCACGGCAGTAGAAGAAATAAGTGC
ATTTATTAACGGAAAGGGAGAAGGAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022085 |
| DBxref | PFAM:PF12311 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:170655..172524 - |
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