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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:176028..178239- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003011-T1 ID=CBS51388_003011-T1|Name=CBS51388_003011-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2212bp|location=Sequence derived from alignment at An04:176028..178239- (Aspergillus niger CBS 513.88)
ATGATGCAGACAGCCCTTCATCAGCCCATGGGGATGACACTCTTGGCTGA
TGCCGCTACTTCGTCCCTCACGGCTCTCAAAGGCTCTACCACATCTTCTG
CTTTAACTTCGTTAACCGTGCCTCCGGAGCCTGCACGGACGGTCGTCACA
GTCTACACTCCGGGGCAGGAGGCCATCGTTCAAGTGGTCGCGGATATCCT
CGGCAAGCCATGGACCACCGAAACCTCGCTGTCTACGTTTGGCCGGGGCA
GCAATGCTGTCGTCGTGGGGTTTCTCGCCACGGAAGATTCCATTCCAAGC
TTACATGTGGATGACCAGACGGCCTGTGTTCTGGTCAACACGCATTGTGT
CGACGATGGATCGTTTCCGGATGACGCACTCACCGAGCGCTGCCATTATG
AGTTCCTGTACTCTTTGCGCAGTCCTTTCTTTCGCCGCGACCTGACGCGC
TTTTTGTCGCTGATCCTGGGCCAGACTCGGCCGCATGAGGACCTGAAGAC
CAAGAACCGGACCAACTTCATCTCCACGACGTTTCCGGATGTGCATGCGG
CCCTGCCAAACCTCGACATTCTCTCTGTGGGGTCGGATGCTGTTGAAATC
CGCGTGGATCTGCTGGTCGATCCTGAACCACCCCAGGGGGCAGAGACATC
CGTGCCGAGCCTTCGCTACGTAGGGCAGCAGTTGATGTTGCTTCGGCAGC
ATACGGAGTTGCCCATTATTTTCACCACCCGGTGCACCAAGGAGAACGGC
AAGTTTCCGATGGATGACCCGATGCTTTTCTACAAATATCTCCGGCGGGC
GATTCAGTGGGGAGTGGAGTACATTGATGTGGAGCTGTGGCTGCCCGAAG
ACATCCGGAGACGGCTGTCGGAGGTCAAAGGAAATAGCATCATCATGTCT
GCGTTCCACGATTTCTCGGGGGCGTGGAAGTGGACGTCGCCAGAGGCACC
CCGGATCTTTGCGGAAAGCGCCAAGTATGCGGACATTGTCAAGATGATCG
CCATGGTGACTACGATCGAGGCCAACTACGAACTGGAGTACTTCCGATCG
ACGATCAAGGGGACCTACGGGCCCTACCCGCTCCTCTCAGCGGTCAACAT
GGGTCAACTGGGGCAGCTTTCGCGTGCGCTCAACACGGTGTTTTCGCCCA
TCACGCATCCGCTACTGCCGATGATTGCCGCGCCCGGCCAGCTGACCGCC
GCCGAGATCAACGAGGCCCTCCACATCATGGGACAGCTTCCCAAGCGGGA
TTTGTACGCGATTGGATCCTTCCGATCCACGCCGCAATCGATGTTCATGG
AGAAATGCTTCAATGAGCTCAGTCTGCCGCACACGCTGACCTCGATCGAC
CGGGGTCCCTCGGGCTCGATCGAGCGGGTGATCACGCAGCCGAGCTTTGG
GGGAGCGTCCGTTCACCCGCCAATCACCAGTGGCACGAGCAGTATCCCAG
CCATCAGCGAAGCAGCGCAAGCGATCGGGCTGGTGGATACTATCGTGGCC
ATGCGGGGCTCTGGGCGGCCACAGCAGGCACCATCGCCGCAACAGCAGTT
GATGGGGGAGAATGCGACGTGGAAGGGAATTCGGGCGACGTTGACACGAG
ACTATGTGCCGTCGGCGTATCGGGGACGAGCAGCCATCATCTTAGCGGGA
AGCGAGAGCGAAGCATCGGCGACGATCTTTGCGTTGCGCAGTCTGGGAGT
GGGCGCGATCCACACGGTCGGGTTTCGGGCGCGCGGCCCGCTGGCGGAGG
GACTGGAGCCGTTTACGTCGATCCAATCGGTGAAGATGGTGGAGCAGCCG
TTTGTGATGGTGTCGGCGCTGCCCCCAGAGAAGTCACTGCTGGTGCAGCC
GTTGCTGCGGCACTACCGGACGAGTGGACGCACGTCGCCGCCGTCGACTC
GGGGGAAAGTGTACCTGGACTTGACGCGGGGAGAGCGCACGGGGGATCCC
GTGGGGGTTGCAGTGCGAGCAGGCTGGACGGCGTATGGGATTGAAGATGT
CGATGCATGGACGACGGTGGAGACACTGCGACTGCTGGTGGGACAGAATG
TACCGTTTGATTTTGTACGTATGGCATCGGGACGGGTGTTTTAGGATTTT
TCTTATATAGTATAGAATTGAAGCCGTATGATGAAATAAATGAACTGTAT
CCACTCTTGGGTAGTGGTTTGCTGCTGCTGCTGCTGCTGCTGCTTTACAA
CTAATGGTGTGA back to topCoding sequence (CDS) from alignment at An04:176028..178239- >CBS51388_003011-T1 ID=CBS51388_003011-T1|Name=CBS51388_003011-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4224bp|location=Sequence derived from alignment at An04:176028..178239- (Aspergillus niger CBS 513.88)
TGGTTTGCTGCTGCTGCTGCTGCTGCTGCTTTACAACTAATGGTGTGAAT
GATGCAGACAGCCCTTCATCAGCCCATGGGGATGACACTCTTGGCTGATG
CCGCTACTTCGTCCCTCACGGCTCTCAAAGGCTCTACCACATCTTCTGCT
TTAACTTCGTTAACCGTGCCTCCGGAGCCTGCACGGACGGTCGTCACAGT
CTACACTCCGGGGCAGGAGGCCATCGTTCAAGTGGTCGCGGATATCCTCG
GCAAGCCATGGACCACCGAAACCTCGCTGTCTACGTTTGGCCGGGGCAGC
AATGCTGTCGTCGTGGGGTTTCTCGCCACGGAAGATTCCATTCCAAGCTT
ACATGTGGATGACCAGACGGCCTGTGTTCTGGTCAACACGCATTGTGTCG
ACGATGGATCGTTTCCGGATGACGCACTCACCGAGCGCTGCCATTATGAG
TTCCTGTACTCTTTGCGCAGTCCTTTCTTTCGCCGCGACCTGACGCGCTT
TTTGTCGCTGATCCTGGGCCAGACTCGGCCGCATGAGGACCTGAAGACCA
AGAACCGGACCAACTTCATCTCCACGACGTTTCCGGATGTGCATGCGGCC
CTGCCAAACCTCGACATTCTCTCTGTGGGGTCGGATGCTGTTGAAATCCG
CGTGGATCTGCTGGTCGATCCTGAACCACCCCAGGGGGCAGAGACATCCG
TGCCGAGCCTTCGCTACGTAGGGCAGCAGTTGATGTTGCTTCGGCAGCAT
ACGGAGTTGCCCATTATTTTCACCACCCGGTGCACCAAGGAGAACGGCAA
GTTTCCGATGGATGACCCGATGCTTTTCTACAAATATCTCCGGCGGGCGA
TTCAGTGGGGAGTGGAGTACATTGATGTGGAGCTGTGGCTGCCCGAAGAC
ATCCGGAGACGGCTGTCGGAGGTCAAAGGAAATAGCATCATCATGTCTGC
GTTCCACGATTTCTCGGGGGCGTGGAAGTGGACGTCGCCAGAGGCACCCC
GGATCTTTGCGGAAAGCGCCAAGTATGCGGACATTGTCAAGATGATCGCC
ATGGTGACTACGATCGAGGCCAACTACGAACTGGAGTACTTCCGATCGAC
GATCAAGGGGACCTACGGGCCCTACCCGCTCCTCTCAGCGGTCAACATGG
GTCAACTGGGGCAGCTTTCGCGTGCGCTCAACACGGTGTTTTCGCCCATC
ACGCATCCGCTACTGCCGATGATTGCCGCGCCCGGCCAGCTGACCGCCGC
CGAGATCAACGAGGCCCTCCACATCATGGGACAGCTTCCCAAGCGGGATT
TGTACGCGATTGGATCCTTCCGATCCACGCCGCAATCGATGTTCATGGAG
AAATGCTTCAATGAGCTCAGTCTGCCGCACACGCTGACCTCGATCGACCG
GGGTCCCTCGGGCTCGATCGAGCGGGTGATCACGCAGCCGAGCTTTGGGG
GAGCGTCCGTTCACCCGCCAATCACCAGTGGCACGAGCAGTATCCCAGCC
ATCAGCGAAGCAGCGCAAGCGATCGGGCTGGTGGATACTATCGTGGCCAT
GCGGGGCTCTGGGCGGCCACAGCAGGCACCATCGCCGCAACAGCAGTTGA
TGGGGGAGAATGCGACGTGGAAGGGAATTCGGGCGACGTTGACACGAGAC
TATGTGCCGTCGGCGTATCGGGGACGAGCAGCCATCATCTTAGCGGGAAG
CGAGAGCGAAGCATCGGCGACGATCTTTGCGTTGCGCAGTCTGGGAGTGG
GCGCGATCCACACGGTCGGGTTTCGGGCGCGCGGCCCGCTGGCGGAGGGA
CTGGAGCCGTTTACGTCGATCCAATCGGTGAAGATGGTGGAGCAGCCGTT
TGTGATGGTGTCGGCGCTGCCCCCAGAGAAGTCACTGCTGGTGCAGCCGT
TGCTGCGGCACTACCGGACGAGTGGACGCACGTCGCCGCCGTCGACTCGG
GGGAAAGTGTACCTGGACTTGACGCGGGGAGAGCGCACGGGGGATCCCGT
GGGGGTTGCAGTGCGAGCAGGCTGGACGGCGTATGGGATTGAAGATGTCG
ATGCATGGACGACGGTGGAGACACTGCGACTGCTGGTGGGACAGAATGTA
CCGTTTGATTTTTGGTTTGCTGCTGCTGCTGCTGCTGCTGCTTTACAACT
AATGGTGTGAATGATGCAGACAGCCCTTCATCAGCCCATGGGGATGACAC
TCTTGGCTGATGCCGCTACTTCGTCCCTCACGGCTCTCAAAGGCTCTACC
ACATCTTCTGCTTTAACTTCGTTAACCGTGCCTCCGGAGCCTGCACGGAC
GGTCGTCACAGTCTACACTCCGGGGCAGGAGGCCATCGTTCAAGTGGTCG
CGGATATCCTCGGCAAGCCATGGACCACCGAAACCTCGCTGTCTACGTTT
GGCCGGGGCAGCAATGCTGTCGTCGTGGGGTTTCTCGCCACGGAAGATTC
CATTCCAAGCTTACATGTGGATGACCAGACGGCCTGTGTTCTGGTCAACA
CGCATTGTGTCGACGATGGATCGTTTCCGGATGACGCACTCACCGAGCGC
TGCCATTATGAGTTCCTGTACTCTTTGCGCAGTCCTTTCTTTCGCCGCGA
CCTGACGCGCTTTTTGTCGCTGATCCTGGGCCAGACTCGGCCGCATGAGG
ACCTGAAGACCAAGAACCGGACCAACTTCATCTCCACGACGTTTCCGGAT
GTGCATGCGGCCCTGCCAAACCTCGACATTCTCTCTGTGGGGTCGGATGC
TGTTGAAATCCGCGTGGATCTGCTGGTCGATCCTGAACCACCCCAGGGGG
CAGAGACATCCGTGCCGAGCCTTCGCTACGTAGGGCAGCAGTTGATGTTG
CTTCGGCAGCATACGGAGTTGCCCATTATTTTCACCACCCGGTGCACCAA
GGAGAACGGCAAGTTTCCGATGGATGACCCGATGCTTTTCTACAAATATC
TCCGGCGGGCGATTCAGTGGGGAGTGGAGTACATTGATGTGGAGCTGTGG
CTGCCCGAAGACATCCGGAGACGGCTGTCGGAGGTCAAAGGAAATAGCAT
CATCATGTCTGCGTTCCACGATTTCTCGGGGGCGTGGAAGTGGACGTCGC
CAGAGGCACCCCGGATCTTTGCGGAAAGCGCCAAGTATGCGGACATTGTC
AAGATGATCGCCATGGTGACTACGATCGAGGCCAACTACGAACTGGAGTA
CTTCCGATCGACGATCAAGGGGACCTACGGGCCCTACCCGCTCCTCTCAG
CGGTCAACATGGGTCAACTGGGGCAGCTTTCGCGTGCGCTCAACACGGTG
TTTTCGCCCATCACGCATCCGCTACTGCCGATGATTGCCGCGCCCGGCCA
GCTGACCGCCGCCGAGATCAACGAGGCCCTCCACATCATGGGACAGCTTC
CCAAGCGGGATTTGTACGCGATTGGATCCTTCCGATCCACGCCGCAATCG
ATGTTCATGGAGAAATGCTTCAATGAGCTCAGTCTGCCGCACACGCTGAC
CTCGATCGACCGGGGTCCCTCGGGCTCGATCGAGCGGGTGATCACGCAGC
CGAGCTTTGGGGGAGCGTCCGTTCACCCGCCAATCACCAGTGGCACGAGC
AGTATCCCAGCCATCAGCGAAGCAGCGCAAGCGATCGGGCTGGTGGATAC
TATCGTGGCCATGCGGGGCTCTGGGCGGCCACAGCAGGCACCATCGCCGC
AACAGCAGTTGATGGGGGAGAATGCGACGTGGAAGGGAATTCGGGCGACG
TTGACACGAGACTATGTGCCGTCGGCGTATCGGGGACGAGCAGCCATCAT
CTTAGCGGGAAGCGAGAGCGAAGCATCGGCGACGATCTTTGCGTTGCGCA
GTCTGGGAGTGGGCGCGATCCACACGGTCGGGTTTCGGGCGCGCGGCCCG
CTGGCGGAGGGACTGGAGCCGTTTACGTCGATCCAATCGGTGAAGATGGT
GGAGCAGCCGTTTGTGATGGTGTCGGCGCTGCCCCCAGAGAAGTCACTGC
TGGTGCAGCCGTTGCTGCGGCACTACCGGACGAGTGGACGCACGTCGCCG
CCGTCGACTCGGGGGAAAGTGTACCTGGACTTGACGCGGGGAGAGCGCAC
GGGGGATCCCGTGGGGGTTGCAGTGCGAGCAGGCTGGACGGCGTATGGGA
TTGAAGATGTCGATGCATGGACGACGGTGGAGACACTGCGACTGCTGGTG
GGACAGAATGTACCGTTTGATTTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003855 | 3-dehydroquinate dehydratase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001381 |
| DBxref | InterPro:IPR013785 |
| DBxref | PFAM:PF01487 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:176028..178239 - |
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