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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:191225..192469+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003014-T1 ID=CBS51388_003014-T1|Name=CBS51388_003014-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1245bp|location=Sequence derived from alignment at An04:191225..192469+ (Aspergillus niger CBS 513.88)
ATGGGAGTGACACGTACGACCCCCTCTCGTCAGCAGCATGCGAGCGCCTC
CACACCGACAGACGCTCGGGCTACACGCTCAAGAGCTGTGGCAAGCACCC
CCACGTCGTCCAGAAAGCGAAAAGCGAATGATCAGAATGTCACACCAAGC
ACATCATCAAAGAAGTCGCGTCGATCAGCTCCAAATGTTCCTACCAAAGA
TTCTGTCGAGGTGGTCGATCTGACTGGCGAAACTCCTAGCCCGCCTAAAA
AAAGAGCTCGAGCACCAGCATCATATGATGAACCAGCTCCTGAACGCCGA
CTAAGAAGATTCCGCAGCCACCCTCCCAGTTCATACCTTGATAGAGCGGC
GCGTGCGCTATCCCAGCGGTATGATCGGTACCCATCTTCGGATAGTCTAG
AAAGCTAATGTGTATCCTTCTACAGGATGTTTGTTGTCGGACATGCTGTC
ACAGAAGTCGACGGTGCGCCCGAGATCTCTTTCGACATCGTCGGCACCAC
TGGCAACATCTACAAGACAACGATAGGGAAGGTGCCAACCTGCAGCTGTC
CGGATGCTCGAAAAGGGAATCAATGCAAACATATCTGTTATGGTACGTCG
AGTCCCTTGCTTTGACAGACTACCCCGCACACTCGTCTCTCTGCTCGATG
TTCCTGCAATGTCCGAGTCGCTGATTAGTTTGTCCTGTGAAGTTCTAGTC
AAGGCCCTTAGAGCGCCCCAGCATCTTCAGTATCAGTTAGCATTCTTGTC
GTCGGTAAGTTTGCAGGGTGGTGAACAAATGGGGGTGCATTGCTAAGGGT
TATGCCATAGGAACTTCGAGAGATGTACAACGGCTCTCCCATCAGCCGCG
AGCAGTCCAACGCTGAAGAGAACAAAGATGGGAACAGGAAGCCTGTTGAA
GGGGACTGCCCGATCTGCTTCATGGAGTTTGAACCCGACAAGGAAGAGAT
AGTCTGGTGCCGAGCAGCATGCGGAAACAATATACACAAGACTTGTTTCC
AGAAATGGGCCGCAACTCAGCAAGCTCAAGGAGTGAGATGCGTCTATTGG
TATGTTCCACATCGAGGGTAAGAGTAAAAGGCATAGCTGACACTTTCACG
TAGCCGTTCTCCTTGGCAAGCAGATGCTGCTAACTTGAACCTTGACGAAC
TGGTCAAAGGGGCCAGTGTAGATTCCGATGGCTACGTCAATGTGGCTGAC
CAGATTGGCCTGTCTGGCATTCGTGGTATGAGACCAACCCTGTGA back to topCoding sequence (CDS) from alignment at An04:191225..192469+ >CBS51388_003014-T1 ID=CBS51388_003014-T1|Name=CBS51388_003014-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4860bp|location=Sequence derived from alignment at An04:191225..192469+ (Aspergillus niger CBS 513.88)
ATGGGAGTGACACGTACGACCCCCTCTCGTCAGCAGCATGCGAGCGCCTC
CACACCGACAGACGCTCGGGCTACACGCTCAAGAGCTGTGGCAAGCACCC
CCACGTCGTCCAGAAAGCGAAAAGCGAATGATCAGAATGTCACACCAAGC
ACATCATCAAAGAAGTCGCGTCGATCAGCTCCAAATGTTCCTACCAAAGA
TTCTGTCGAGGTGGTCGATCTGACTGGCGAAACTCCTAGCCCGCCTAAAA
AAAGAGCTCGAGCACCAGCATCATATGATGAACCAGCTCCTGAACGCCGA
CTAAGAAGATTCCGCAGCCACCCTCCCAGTTCATACCTTGATAGAGCGGC
GCGTGCGCTATCCCAGCGGATGTTTGTTGTCGGACATGCTGTCACAGAAG
TCGACGGTGCGCCCGAGATCTCTTTCGACATCGTCGGCACCACTGGCAAC
ATCTACAAGACAACGATAGGGAAGGTGCCAACCTGCAGCTGTCCGGATGC
TCGAAAAGGGAATCAATGCAAACATATCTGTTATGTCAAGGCCCTTAGAG
CGCCCCAGCATCTTCAGTATCAGTTAGCATTCTTGTCGTCGGAACTTCGA
GAGATGTACAACGGCTCTCCCATCAGCCGCGAGCAGTCCAACGCTGAAGA
GAACAAAGATGGGAACAGGAAGCCTGTTGAAGGGGACTGCCCGATCTGCT
TCATGGAGTTTGAACCCGACAAGGAAGAGATAGTCTGGTGCCGAGCAGCA
TGCGGAAACAATATACACAAGACTTGTTTCCAGAAATGGGCCGCAACTCA
GCAAGCTCAAGGAGTGAGATGCGTCTATTGCCGTTCTCCTTGGCAAGCAG
ATGCTGCTAACTTGAACCTTGACGAACTGGTCAAAGGGGCCAGTGTAGAT
TCCGATGGCTACGTCAATGTGGCTGACCAGATTGGCCTGTCTGGCATTCG
TGGTATGAGACCAACCCTGTGAATGGGAGTGACACGTACGACCCCCTCTC
GTCAGCAGCATGCGAGCGCCTCCACACCGACAGACGCTCGGGCTACACGC
TCAAGAGCTGTGGCAAGCACCCCCACGTCGTCCAGAAAGCGAAAAGCGAA
TGATCAGAATGTCACACCAAGCACATCATCAAAGAAGTCGCGTCGATCAG
CTCCAAATGTTCCTACCAAAGATTCTGTCGAGGTGGTCGATCTGACTGGC
GAAACTCCTAGCCCGCCTAAAAAAAGAGCTCGAGCACCAGCATCATATGA
TGAACCAGCTCCTGAACGCCGACTAAGAAGATTCCGCAGCCACCCTCCCA
GTTCATACCTTGATAGAGCGGCGCGTGCGCTATCCCAGCGGATGTTTGTT
GTCGGACATGCTGTCACAGAAGTCGACGGTGCGCCCGAGATCTCTTTCGA
CATCGTCGGCACCACTGGCAACATCTACAAGACAACGATAGGGAAGGTGC
CAACCTGCAGCTGTCCGGATGCTCGAAAAGGGAATCAATGCAAACATATC
TGTTATGTCAAGGCCCTTAGAGCGCCCCAGCATCTTCAGTATCAGTTAGC
ATTCTTGTCGTCGGAACTTCGAGAGATGTACAACGGCTCTCCCATCAGCC
GCGAGCAGTCCAACGCTGAAGAGAACAAAGATGGGAACAGGAAGCCTGTT
GAAGGGGACTGCCCGATCTGCTTCATGGAGTTTGAACCCGACAAGGAAGA
GATAGTCTGGTGCCGAGCAGCATGCGGAAACAATATACACAAGACTTGTT
TCCAGAAATGGGCCGCAACTCAGCAAGCTCAAGGAGTGAGATGCGTCTAT
TGCCGTTCTCCTTGGCAAGCAGATGCTGCTAACTTGAACCTTGACGAACT
GGTCAAAGGGGCCAGTGTAGATTCCGATGGCTACGTCAATGTGGCTGACC
AGATTGGCCTGTCTGGCATTCGTGGTATGAGACCAACCCTGTGAATGGGA
GTGACACGTACGACCCCCTCTCGTCAGCAGCATGCGAGCGCCTCCACACC
GACAGACGCTCGGGCTACACGCTCAAGAGCTGTGGCAAGCACCCCCACGT
CGTCCAGAAAGCGAAAAGCGAATGATCAGAATGTCACACCAAGCACATCA
TCAAAGAAGTCGCGTCGATCAGCTCCAAATGTTCCTACCAAAGATTCTGT
CGAGGTGGTCGATCTGACTGGCGAAACTCCTAGCCCGCCTAAAAAAAGAG
CTCGAGCACCAGCATCATATGATGAACCAGCTCCTGAACGCCGACTAAGA
AGATTCCGCAGCCACCCTCCCAGTTCATACCTTGATAGAGCGGCGCGTGC
GCTATCCCAGCGGATGTTTGTTGTCGGACATGCTGTCACAGAAGTCGACG
GTGCGCCCGAGATCTCTTTCGACATCGTCGGCACCACTGGCAACATCTAC
AAGACAACGATAGGGAAGGTGCCAACCTGCAGCTGTCCGGATGCTCGAAA
AGGGAATCAATGCAAACATATCTGTTATGTCAAGGCCCTTAGAGCGCCCC
AGCATCTTCAGTATCAGTTAGCATTCTTGTCGTCGGAACTTCGAGAGATG
TACAACGGCTCTCCCATCAGCCGCGAGCAGTCCAACGCTGAAGAGAACAA
AGATGGGAACAGGAAGCCTGTTGAAGGGGACTGCCCGATCTGCTTCATGG
AGTTTGAACCCGACAAGGAAGAGATAGTCTGGTGCCGAGCAGCATGCGGA
AACAATATACACAAGACTTGTTTCCAGAAATGGGCCGCAACTCAGCAAGC
TCAAGGAGTGAGATGCGTCTATTGCCGTTCTCCTTGGCAAGCAGATGCTG
CTAACTTGAACCTTGACGAACTGGTCAAAGGGGCCAGTGTAGATTCCGAT
GGCTACGTCAATGTGGCTGACCAGATTGGCCTGTCTGGCATTCGTGGTAT
GAGACCAACCCTGTGAATGGGAGTGACACGTACGACCCCCTCTCGTCAGC
AGCATGCGAGCGCCTCCACACCGACAGACGCTCGGGCTACACGCTCAAGA
GCTGTGGCAAGCACCCCCACGTCGTCCAGAAAGCGAAAAGCGAATGATCA
GAATGTCACACCAAGCACATCATCAAAGAAGTCGCGTCGATCAGCTCCAA
ATGTTCCTACCAAAGATTCTGTCGAGGTGGTCGATCTGACTGGCGAAACT
CCTAGCCCGCCTAAAAAAAGAGCTCGAGCACCAGCATCATATGATGAACC
AGCTCCTGAACGCCGACTAAGAAGATTCCGCAGCCACCCTCCCAGTTCAT
ACCTTGATAGAGCGGCGCGTGCGCTATCCCAGCGGATGTTTGTTGTCGGA
CATGCTGTCACAGAAGTCGACGGTGCGCCCGAGATCTCTTTCGACATCGT
CGGCACCACTGGCAACATCTACAAGACAACGATAGGGAAGGTGCCAACCT
GCAGCTGTCCGGATGCTCGAAAAGGGAATCAATGCAAACATATCTGTTAT
GTCAAGGCCCTTAGAGCGCCCCAGCATCTTCAGTATCAGTTAGCATTCTT
GTCGTCGGAACTTCGAGAGATGTACAACGGCTCTCCCATCAGCCGCGAGC
AGTCCAACGCTGAAGAGAACAAAGATGGGAACAGGAAGCCTGTTGAAGGG
GACTGCCCGATCTGCTTCATGGAGTTTGAACCCGACAAGGAAGAGATAGT
CTGGTGCCGAGCAGCATGCGGAAACAATATACACAAGACTTGTTTCCAGA
AATGGGCCGCAACTCAGCAAGCTCAAGGAGTGAGATGCGTCTATTGCCGT
TCTCCTTGGCAAGCAGATGCTGCTAACTTGAACCTTGACGAACTGGTCAA
AGGGGCCAGTGTAGATTCCGATGGCTACGTCAATGTGGCTGACCAGATTG
GCCTGTCTGGCATTCGTGGTATGAGACCAACCCTGTGAATGGGAGTGACA
CGTACGACCCCCTCTCGTCAGCAGCATGCGAGCGCCTCCACACCGACAGA
CGCTCGGGCTACACGCTCAAGAGCTGTGGCAAGCACCCCCACGTCGTCCA
GAAAGCGAAAAGCGAATGATCAGAATGTCACACCAAGCACATCATCAAAG
AAGTCGCGTCGATCAGCTCCAAATGTTCCTACCAAAGATTCTGTCGAGGT
GGTCGATCTGACTGGCGAAACTCCTAGCCCGCCTAAAAAAAGAGCTCGAG
CACCAGCATCATATGATGAACCAGCTCCTGAACGCCGACTAAGAAGATTC
CGCAGCCACCCTCCCAGTTCATACCTTGATAGAGCGGCGCGTGCGCTATC
CCAGCGGATGTTTGTTGTCGGACATGCTGTCACAGAAGTCGACGGTGCGC
CCGAGATCTCTTTCGACATCGTCGGCACCACTGGCAACATCTACAAGACA
ACGATAGGGAAGGTGCCAACCTGCAGCTGTCCGGATGCTCGAAAAGGGAA
TCAATGCAAACATATCTGTTATGTCAAGGCCCTTAGAGCGCCCCAGCATC
TTCAGTATCAGTTAGCATTCTTGTCGTCGGAACTTCGAGAGATGTACAAC
GGCTCTCCCATCAGCCGCGAGCAGTCCAACGCTGAAGAGAACAAAGATGG
GAACAGGAAGCCTGTTGAAGGGGACTGCCCGATCTGCTTCATGGAGTTTG
AACCCGACAAGGAAGAGATAGTCTGGTGCCGAGCAGCATGCGGAAACAAT
ATACACAAGACTTGTTTCCAGAAATGGGCCGCAACTCAGCAAGCTCAAGG
AGTGAGATGCGTCTATTGCCGTTCTCCTTGGCAAGCAGATGCTGCTAACT
TGAACCTTGACGAACTGGTCAAAGGGGCCAGTGTAGATTCCGATGGCTAC
GTCAATGTGGCTGACCAGATTGGCCTGTCTGGCATTCGTGGTATGAGACC
AACCCTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007527 |
| DBxref | InterPro:IPR001841 |
| DBxref | InterPro:IPR013083 |
| DBxref | PFAM:PF13639 |
| DBxref | PFAM:PF12861 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:191225..192469 + |
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