|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:199642..202522+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003018-T1 ID=CBS51388_003018-T1|Name=CBS51388_003018-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2881bp|location=Sequence derived from alignment at An04:199642..202522+ (Aspergillus niger CBS 513.88)
ATGTCGTCATGGGATCCCAAGATACGGCCTCTACCGCCTGATGTAGTGGC
GAAGCTCAAATCCTCAACTGCCATTACACACTTGAACGGAGTCATTGTAG
AGCTAGTCAAGAATGCATTAGATGCAAATGCCCGCACAGTCTGTGTCACG
GTCGACTTCGTTCGCGGGGGCTGTATAGTCGAAGATGATGGAGATGGCAT
TCCTCCAGCGGAGTTTGGACCAGACGGAGGATTGGGAAAAGCGCACCGTA
AGTTTAACTGCCACATAACAATACCTTTTACTCATAAGTGACGCAGATAC
TTCAAAATACCATTCGAACCATACTATTGAAGGACGCAAAGGGCTTTTTC
TTGCCTCGCTTGCAGCTCTTTCTCTGCTGACGATCACGTCACATCATGTT
CGCCATTCGAGTACTAATACTGTCACTTTCCATCACTTGACGCCGGTTGC
TCGTTTGATGCCAGCTCCAGTTTATCAGGAGCTGAGGTTTAGTGCCCATG
GCACCTCTGTCACAGTAAATGATCTGTTCGGGAATATGCCCGTGCGCGTA
AAAAGCCGAGCCTTGGCTCTTCAAAGACCGGATGAGCTGGAGCGGCAGTG
GGATGAATTGAGGCACTTTTTGGTGTCGTTCATGGTTGCAAACGACAGGG
TGGCTAAGCTAGTGATCCTAGACGCTCATAGAGACAAAAAGATTACAGTT
TGCCCCCAGGGACTTGCAAGACAATATGGCGGGGAGCCTGATCTACAGCG
ACTGCGTTCCATCCTGGCACAGTCGGGGCTTGTCGGGGCTCAGAATACGG
GCATATGGGATACCGTATCAGCCAGCGTTTCCGACTTCACGATTCATGCA
GCAGTCTCTTTGACGCCTAGTCCTACGAAGAAGGTCCAGTTCGTCTCTTT
AGGCTCGACCCCGGTGTTCGCGAGGAGCAACGCGAATCTGATCTATGCGG
AAGTCAATCGCTCATTTGCCTTGTCGGACTTTGGGTCTATGAAAAACTGC
TCCTCTGCAGTTGAAGCGCCCGTCCGGGCTGCTGATGGCCAACTCATGCA
TAGCAAACCTGCGTCTAAAGCAGTCAATAAATGGCCAATGTTCTATATAC
GTATAGACAGCTGCAATGAGTGGAGTATCGACGACGACACGCAAGAACTT
CCGGAATCAGACAAGTCCCTCCAACGTATCATAGATGTGCTTTCGACAAT
GATCAACGAATTTCTCAGGCAAAGCAGCTTACGCCCACGGACTGGGAAAA
GGAAAAGAAGTACGCCCAATGTACCACCAGCTACTACGCGCCATAGCAGC
GTGAAGGCCGGAAGGTCTCTATCTCCAGGAGGTGAAGTCTCCGCCACCGA
AGAAACTCTCGGCAATCAGCTCAGGCTCCCCTCTTTGCGAAGACCACCCA
ATGTCAGTCATCACTTCGGAGATTGGACCAGGATAAAAAGTGCGAAGCCG
GAAACGGTTAGCAAGAGGTTTCCTTTACGCGGTCGCGAACCCAGGTCAAC
TCGCTCAGAGAATTACCCAGCACATCAAGTCCAGGATCATTTGAACCAGC
AACCAGCGCTCCTATCTGCAAGCAATGAAGGCACGGCCACTGAGCCCCGA
TCTCCTGTACTGGAAGAACCAGAGAAGCACGAAGAGCAACTTAATCAGAT
TCATGAAGAGACAGCTACCGACAGAATGACGCCATGGGTCGATCCTTACA
CGGGTAGACGCCACTTAATCAACTCGCGCACTGGTCAGTCCATACTCCAT
GGGTCTTCAGTAGCAGCGGACGTGGCGCTGCGGCCCCGGTCCACTGGGTG
TCTACCAGAACCACATCGCGCTCCAGATGAAGTGCAGCGACCAAGATCGG
TCGATCTGCAGAGGACCGACAACAAGTGGGTTGAGAAACTTTTGGACAAT
TGGATTAACCCTGTTTTTGGTCGCCCAGAGAGGCCTATCAGTGCGATGGA
TGTCAGTGCTGGCCACGAGACAGCTCGCCCCGGGTCTAGCTCGCGGAACA
ATCAGGGCGAGCTATGCGGTTTCGAAAGCATGGGAGTGTCGAAGTTTCGC
GGCAAACTGCGCAAACAGGATTTAAGAGCTGCAGAAATTATCGCCCAAGT
GGATCAGAAATTCATCCTGGTAAAGATGCAATTGCCCTCCAATAGCCCTG
GGGAGCCTGCATCAAACCTGATCTTGATCGATCAGCACGCTGCGGATGAA
CGCTGCCGGGTCGAGGCACTCATGGCAGAGCTGTTCACATCAGAAGAAGA
TAGCCCGGGCTCCATCCAAACCATCACATTGGATCCCATTATTTTTGAGA
TACCCGCTACCGAAGCATCCCTATTTGAACGATATAGAAATTTCTTCCAC
TCTTGGGGTGTAGCTTACACCATGGAACAAGGACCCAAAGACAAGAACGT
CTTCATTTTCGTACACACCCTCCCAACCCTCATCGCCGAGCGCTGCCGCA
CCGAGCCCAACCTAGTCTCTGACCTCATCCGCGGCGAGATCTGGAAACGC
GAAGAAGAAAACGGCCGAAGCCGACAGCCTCACCATCCCACCGGCTTCGG
CGCTTCTCGTCCAGATATGGCCCAAACCAGCAGCAGTTGGGTAGACCGAC
TCGACGGCTGTCCTCGAGGGATCATCGACCTGCTGAACTCTCGCGCATGC
CGCACGGCAGTCATGTTCAATGATGTTCTGGACAAGAATGAATGCCAGAG
TTTGGTCCGACGACTCGCAGATTGCGTTTTCCCTTTCCAGTGCGCGCACG
GCCGGCCCTCGATGATACCTATTTTGGAAATGGGGGCTGCTGTATCATTG
GATCAGACTCAGTCGGATGAATATGAAGGTCCTGGTTTTGTTGGCATGTT
TAGGAAATGGCAGGATGCGAAGACTGGTTAG back to topCoding sequence (CDS) from alignment at An04:199642..202522+ >CBS51388_003018-T1 ID=CBS51388_003018-T1|Name=CBS51388_003018-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5316bp|location=Sequence derived from alignment at An04:199642..202522+ (Aspergillus niger CBS 513.88)
ATGTCGTCATGGGATCCCAAGATACGGCCTCTACCGCCTGATGTAGTGGC
GAAGCTCAAATCCTCAACTGCCATTACACACTTGAACGGAGTCATTGTAG
AGCTAGTCAAGAATGCATTAGATGCAAATGCCCGCACAGTCTGTGTCACG
GTCGACTTCGTTCGCGGGGGCTGTATAGTCGAAGATGATGGAGATGGCAT
TCCTCCAGCGGAGTTTGGACCAGACGGAGGATTGGGAAAAGCGCACCTTT
ATCAGGAGCTGAGGTTTAGTGCCCATGGCACCTCTGTCACAGTAAATGAT
CTGTTCGGGAATATGCCCGTGCGCGTAAAAAGCCGAGCCTTGGCTCTTCA
AAGACCGGATGAGCTGGAGCGGCAGTGGGATGAATTGAGGCACTTTTTGG
TGTCGTTCATGGTTGCAAACGACAGGGTGGCTAAGCTAGTGATCCTAGAC
GCTCATAGAGACAAAAAGATTACAGTTTGCCCCCAGGGACTTGCAAGACA
ATATGGCGGGGAGCCTGATCTACAGCGACTGCGTTCCATCCTGGCACAGT
CGGGGCTTGTCGGGGCTCAGAATACGGGCATATGGGATACCGTATCAGCC
AGCGTTTCCGACTTCACGATTCATGCAGCAGTCTCTTTGACGCCTAGTCC
TACGAAGAAGGTCCAGTTCGTCTCTTTAGGCTCGACCCCGGTGTTCGCGA
GGAGCAACGCGAATCTGATCTATGCGGAAGTCAATCGCTCATTTGCCTTG
TCGGACTTTGGGTCTATGAAAAACTGCTCCTCTGCAGTTGAAGCGCCCGT
CCGGGCTGCTGATGGCCAACTCATGCATAGCAAACCTGCGTCTAAAGCAG
TCAATAAATGGCCAATGTTCTATATACGTATAGACAGCTGCAATGAGTGG
AGTATCGACGACGACACGCAAGAACTTCCGGAATCAGACAAGTCCCTCCA
ACGTATCATAGATGTGCTTTCGACAATGATCAACGAATTTCTCAGGCAAA
GCAGCTTACGCCCACGGACTGGGAAAAGGAAAAGAAGTACGCCCAATGTA
CCACCAGCTACTACGCGCCATAGCAGCGTGAAGGCCGGAAGGTCTCTATC
TCCAGGAGGTGAAGTCTCCGCCACCGAAGAAACTCTCGGCAATCAGCTCA
GGCTCCCCTCTTTGCGAAGACCACCCAATGTCAGTCATCACTTCGGAGAT
TGGACCAGGATAAAAAGTGCGAAGCCGGAAACGGTTAGCAAGAGGTTTCC
TTTACGCGGTCGCGAACCCAGGTCAACTCGCTCAGAGAATTACCCAGCAC
ATCAAGTCCAGGATCATTTGAACCAGCAACCAGCGCTCCTATCTGCAAGC
AATGAAGGCACGGCCACTGAGCCCCGATCTCCTGTACTGGAAGAACCAGA
GAAGCACGAAGAGCAACTTAATCAGATTCATGAAGAGACAGCTACCGACA
GAATGACGCCATGGGTCGATCCTTACACGGGTAGACGCCACTTAATCAAC
TCGCGCACTGGTCAGTCCATACTCCATGGGTCTTCAGTAGCAGCGGACGT
GGCGCTGCGGCCCCGGTCCACTGGGTGTCTACCAGAACCACATCGCGCTC
CAGATGAAGTGCAGCGACCAAGATCGGTCGATCTGCAGAGGACCGACAAC
AAGTGGGTTGAGAAACTTTTGGACAATTGGATTAACCCTGTTTTTGGTCG
CCCAGAGAGGCCTATCAGTGCGATGGATGTCAGTGCTGGCCACGAGACAG
CTCGCCCCGGGTCTAGCTCGCGGAACAATCAGGGCGAGCTATGCGGTTTC
GAAAGCATGGGAGTGTCGAAGTTTCGCGGCAAACTGCGCAAACAGGATTT
AAGAGCTGCAGAAATTATCGCCCAAGTGGATCAGAAATTCATCCTGGTAA
AGATGCAATTGCCCTCCAATAGCCCTGGGGAGCCTGCATCAAACCTGATC
TTGATCGATCAGCACGCTGCGGATGAACGCTGCCGGGTCGAGGCACTCAT
GGCAGAGCTGTTCACATCAGAAGAAGATAGCCCGGGCTCCATCCAAACCA
TCACATTGGATCCCATTATTTTTGAGATACCCGCTACCGAAGCATCCCTA
TTTGAACGATATAGAAATTTCTTCCACTCTTGGGGTGTAGCTTACACCAT
GGAACAAGGACCCAAAGACAAGAACGTCTTCATTTTCGTACACACCCTCC
CAACCCTCATCGCCGAGCGCTGCCGCACCGAGCCCAACCTAGTCTCTGAC
CTCATCCGCGGCGAGATCTGGAAACGCGAAGAAGAAAACGGCCGAAGCCG
ACAGCCTCACCATCCCACCGGCTTCGGCGCTTCTCGTCCAGATATGGCCC
AAACCAGCAGCAGTTGGGTAGACCGACTCGACGGCTGTCCTCGAGGGATC
ATCGACCTGCTGAACTCTCGCGCATGCCGCACGGCAGTCATGTTCAATGA
TGTTCTGGACAAGAATGAATGCCAGAGTTTGGTCCGACGACTCGCAGATT
GCGTTTTCCCTTTCCAGTGCGCGCACGGCCGGCCCTCGATGATACCTATT
TTGGAAATGGGGGCTGCTGTATCATTGGATCAGACTCAGTCGGATGAATA
TGAAGGTCCTGGTTTTGTTGGCATGTTTAGGAAATGGCAGGATGCGAAGA
CTGGTTAGATGTCGTCATGGGATCCCAAGATACGGCCTCTACCGCCTGAT
GTAGTGGCGAAGCTCAAATCCTCAACTGCCATTACACACTTGAACGGAGT
CATTGTAGAGCTAGTCAAGAATGCATTAGATGCAAATGCCCGCACAGTCT
GTGTCACGGTCGACTTCGTTCGCGGGGGCTGTATAGTCGAAGATGATGGA
GATGGCATTCCTCCAGCGGAGTTTGGACCAGACGGAGGATTGGGAAAAGC
GCACCTTTATCAGGAGCTGAGGTTTAGTGCCCATGGCACCTCTGTCACAG
TAAATGATCTGTTCGGGAATATGCCCGTGCGCGTAAAAAGCCGAGCCTTG
GCTCTTCAAAGACCGGATGAGCTGGAGCGGCAGTGGGATGAATTGAGGCA
CTTTTTGGTGTCGTTCATGGTTGCAAACGACAGGGTGGCTAAGCTAGTGA
TCCTAGACGCTCATAGAGACAAAAAGATTACAGTTTGCCCCCAGGGACTT
GCAAGACAATATGGCGGGGAGCCTGATCTACAGCGACTGCGTTCCATCCT
GGCACAGTCGGGGCTTGTCGGGGCTCAGAATACGGGCATATGGGATACCG
TATCAGCCAGCGTTTCCGACTTCACGATTCATGCAGCAGTCTCTTTGACG
CCTAGTCCTACGAAGAAGGTCCAGTTCGTCTCTTTAGGCTCGACCCCGGT
GTTCGCGAGGAGCAACGCGAATCTGATCTATGCGGAAGTCAATCGCTCAT
TTGCCTTGTCGGACTTTGGGTCTATGAAAAACTGCTCCTCTGCAGTTGAA
GCGCCCGTCCGGGCTGCTGATGGCCAACTCATGCATAGCAAACCTGCGTC
TAAAGCAGTCAATAAATGGCCAATGTTCTATATACGTATAGACAGCTGCA
ATGAGTGGAGTATCGACGACGACACGCAAGAACTTCCGGAATCAGACAAG
TCCCTCCAACGTATCATAGATGTGCTTTCGACAATGATCAACGAATTTCT
CAGGCAAAGCAGCTTACGCCCACGGACTGGGAAAAGGAAAAGAAGTACGC
CCAATGTACCACCAGCTACTACGCGCCATAGCAGCGTGAAGGCCGGAAGG
TCTCTATCTCCAGGAGGTGAAGTCTCCGCCACCGAAGAAACTCTCGGCAA
TCAGCTCAGGCTCCCCTCTTTGCGAAGACCACCCAATGTCAGTCATCACT
TCGGAGATTGGACCAGGATAAAAAGTGCGAAGCCGGAAACGGTTAGCAAG
AGGTTTCCTTTACGCGGTCGCGAACCCAGGTCAACTCGCTCAGAGAATTA
CCCAGCACATCAAGTCCAGGATCATTTGAACCAGCAACCAGCGCTCCTAT
CTGCAAGCAATGAAGGCACGGCCACTGAGCCCCGATCTCCTGTACTGGAA
GAACCAGAGAAGCACGAAGAGCAACTTAATCAGATTCATGAAGAGACAGC
TACCGACAGAATGACGCCATGGGTCGATCCTTACACGGGTAGACGCCACT
TAATCAACTCGCGCACTGGTCAGTCCATACTCCATGGGTCTTCAGTAGCA
GCGGACGTGGCGCTGCGGCCCCGGTCCACTGGGTGTCTACCAGAACCACA
TCGCGCTCCAGATGAAGTGCAGCGACCAAGATCGGTCGATCTGCAGAGGA
CCGACAACAAGTGGGTTGAGAAACTTTTGGACAATTGGATTAACCCTGTT
TTTGGTCGCCCAGAGAGGCCTATCAGTGCGATGGATGTCAGTGCTGGCCA
CGAGACAGCTCGCCCCGGGTCTAGCTCGCGGAACAATCAGGGCGAGCTAT
GCGGTTTCGAAAGCATGGGAGTGTCGAAGTTTCGCGGCAAACTGCGCAAA
CAGGATTTAAGAGCTGCAGAAATTATCGCCCAAGTGGATCAGAAATTCAT
CCTGGTAAAGATGCAATTGCCCTCCAATAGCCCTGGGGAGCCTGCATCAA
ACCTGATCTTGATCGATCAGCACGCTGCGGATGAACGCTGCCGGGTCGAG
GCACTCATGGCAGAGCTGTTCACATCAGAAGAAGATAGCCCGGGCTCCAT
CCAAACCATCACATTGGATCCCATTATTTTTGAGATACCCGCTACCGAAG
CATCCCTATTTGAACGATATAGAAATTTCTTCCACTCTTGGGGTGTAGCT
TACACCATGGAACAAGGACCCAAAGACAAGAACGTCTTCATTTTCGTACA
CACCCTCCCAACCCTCATCGCCGAGCGCTGCCGCACCGAGCCCAACCTAG
TCTCTGACCTCATCCGCGGCGAGATCTGGAAACGCGAAGAAGAAAACGGC
CGAAGCCGACAGCCTCACCATCCCACCGGCTTCGGCGCTTCTCGTCCAGA
TATGGCCCAAACCAGCAGCAGTTGGGTAGACCGACTCGACGGCTGTCCTC
GAGGGATCATCGACCTGCTGAACTCTCGCGCATGCCGCACGGCAGTCATG
TTCAATGATGTTCTGGACAAGAATGAATGCCAGAGTTTGGTCCGACGACT
CGCAGATTGCGTTTTCCCTTTCCAGTGCGCGCACGGCCGGCCCTCGATGA
TACCTATTTTGGAAATGGGGGCTGCTGTATCATTGGATCAGACTCAGTCG
GATGAATATGAAGGTCCTGGTTTTGTTGGCATGTTTAGGAAATGGCAGGA
TGCGAAGACTGGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006298 | mismatch repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037198 |
| DBxref | InterPro:IPR036890 |
| DBxref | InterPro:IPR014790 |
| DBxref | PFAM:PF08676 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:199642..202522 + |
|
