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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:266580..267197- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003029-T1 ID=CBS51388_003029-T1|Name=CBS51388_003029-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=618bp|location=Sequence derived from alignment at An04:266580..267197- (Aspergillus niger CBS 513.88)
ATGTTGTTCGCTCATTTTGCTTTCCTTGTTACACTCCTGGCCTTAGGAGG
CCTCACCGTAGCTACACAGACCCGGCCATGTTTGGTGTCTGCCATGAGGT
ATACCGTGACAGCAGATAGCTGCACTTAGTTGATGTCTCCTGCTAACCCC
GGTATAGGTCTCAATCGGATCCTGATAACCTCCAAGACATTTGTGCGACG
AACGTAGGCAAGGTGTGGGCCAAGATCGTGGAATTTTGCGGGGATGAGAG
ACAATCGGCTCTGGAGCAGTTAAAAGACACCTGCACATCTGCAGGTTACA
CAATTGGTATGTCTTGAACTTGGGTGATGCTTGTGACAAAGATGAGAGAC
ATTTGACTCTACTTATGCAGCATACAAACCAACAGCCTCGTCCGACATCG
CGTCCCATTCCACCGCTCTTTTCAGCTCAACCAAGCCTAGCTCCGTCATA
GCTAGTTCAACCGGCATCTCCACTTCCAGCTCTGCTCCAGACGCCAGCTC
TAGTCTTTGTCCCAGCACTCATCCTAACCAGACCATTTCGTTGGGCTCGG
CTGACCGTGGCGCGTCAGCTGCTGCGTTTGCGGCTGTCGTTTTTGTCGGA
TTTGCAGCGACGTTATAG back to topCoding sequence (CDS) from alignment at An04:266580..267197- >CBS51388_003029-T1 ID=CBS51388_003029-T1|Name=CBS51388_003029-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1485bp|location=Sequence derived from alignment at An04:266580..267197- (Aspergillus niger CBS 513.88)
CATACAAACCAACAGCCTCGTCCGACATCGCGTCCCATTCCACCGCTCTT
TTCAGCTCAACCAAGCCTAGCTCCGTCATAGCTAGTTCAACCGGCATCTC
CACTTCCAGCTCTGCTCCAGACGCCAGCTCTAGTCTTTGTCCCAGCACTC
ATCCTAACCAGACCATTTCGTTGGGCTCGGCTGACCGTGGCGCGTCAGCT
GCTGCGTTTGCGGCTGTCGTTTTTGTCGGATTTGCAGCGACGTTATAGGT
CTCAATCGGATCCTGATAACCTCCAAGACATTTGTGCGACGAACGTAGGC
AAGGTGTGGGCCAAGATCGTGGAATTTTGCGGGGATGAGAGACAATCGGC
TCTGGAGCAGTTAAAAGACACCTGCACATCTGCAGGTTACACAATTGATG
TTGTTCGCTCATTTTGCTTTCCTTGTTACACTCCTGGCCTTAGGAGGCCT
CACCGTAGCTACACAGACCCGGCCATGTTTGGTGTCTGCCATGAGCATAC
AAACCAACAGCCTCGTCCGACATCGCGTCCCATTCCACCGCTCTTTTCAG
CTCAACCAAGCCTAGCTCCGTCATAGCTAGTTCAACCGGCATCTCCACTT
CCAGCTCTGCTCCAGACGCCAGCTCTAGTCTTTGTCCCAGCACTCATCCT
AACCAGACCATTTCGTTGGGCTCGGCTGACCGTGGCGCGTCAGCTGCTGC
GTTTGCGGCTGTCGTTTTTGTCGGATTTGCAGCGACGTTATAGGTCTCAA
TCGGATCCTGATAACCTCCAAGACATTTGTGCGACGAACGTAGGCAAGGT
GTGGGCCAAGATCGTGGAATTTTGCGGGGATGAGAGACAATCGGCTCTGG
AGCAGTTAAAAGACACCTGCACATCTGCAGGTTACACAATTGATGTTGTT
CGCTCATTTTGCTTTCCTTGTTACACTCCTGGCCTTAGGAGGCCTCACCG
TAGCTACACAGACCCGGCCATGTTTGGTGTCTGCCATGAGCATACAAACC
AACAGCCTCGTCCGACATCGCGTCCCATTCCACCGCTCTTTTCAGCTCAA
CCAAGCCTAGCTCCGTCATAGCTAGTTCAACCGGCATCTCCACTTCCAGC
TCTGCTCCAGACGCCAGCTCTAGTCTTTGTCCCAGCACTCATCCTAACCA
GACCATTTCGTTGGGCTCGGCTGACCGTGGCGCGTCAGCTGCTGCGTTTG
CGGCTGTCGTTTTTGTCGGATTTGCAGCGACGTTATAGGTCTCAATCGGA
TCCTGATAACCTCCAAGACATTTGTGCGACGAACGTAGGCAAGGTGTGGG
CCAAGATCGTGGAATTTTGCGGGGATGAGAGACAATCGGCTCTGGAGCAG
TTAAAAGACACCTGCACATCTGCAGGTTACACAATTGATGTTGTTCGCTC
ATTTTGCTTTCCTTGTTACACTCCTGGCCTTAGGAGGCCTCACCGTAGCT
ACACAGACCCGGCCATGTTTGGTGTCTGCCATGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.1 |
| Note | SECRETED:SignalP(1-21) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:266580..267197 - |
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