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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:303726..305052+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003042-T1 ID=CBS51388_003042-T1|Name=CBS51388_003042-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1327bp|location=Sequence derived from alignment at An04:303726..305052+ (Aspergillus niger CBS 513.88)
ATGGCTTTCATCAAATACGCCCTCCCCGCTCTTGCTGCGGCCCAGGCCGC
CATGGCTGCCAGTGAGTACCACCAGCGATAATCTGGATGAAGTGAGCAGT
GAACGGCAATGACTGATGACAATGTAGGCTGTGGTAGCAGCGGCAGCACC
ATCACCATCTCCAGCCAGAGTGACCTTGACAGCTACGCCACCTGCACCAC
CCTCAAGGGTGATGTCGAGATCAGCGAGAGCGCCTCTGGTGACCTCACCC
TCAACGGTGTCACCTCCATCGCTGGTGGACTGAGCTGCACCGGCGGCAGC
AACATCACCTCGTTCAGCTCCTCCTCCCTGAGCTCCATTGGCGACACCTT
CAAGCTGGACGGTCTCACCACTCTCACCACCCTCAGCTTGACCAACCTCA
CCAGCGTTGGCTCCATCTCCTGGACTGCTCTCCCCGAGCTGCAGTCCCTT
GACTTCACCAAGGGTGTTTCCGAGGCCGGCAGTGTCACCATCACCAACAC
TGGTCTTACCAGCTTGGATGGTATCTCCCTCAAGACTGTCGGTACCTTCG
ACATCACCGAGAACACCAACCTGAAGACCGTCAACGTCAACGAGCTCACC
AACGCCACTGGTCTGATCAACTTCGCTGGTAACATGGACTCCCTGCAGAT
TATCCTGCCCAACCTCGGCACCGGTACCAACATGACCTTCCGTAACGTCA
GCGGTGTCTCCATCCCCTCTCTCGAGACTCTCAGCGGTCAGCTCGGTTTC
TGGGGTAACACCTTCACCAACTTCAGCGCTGCCAACCTCACCACCACTGG
TGACCTTGTCTTCGACGACAACACCAAGCTGAACAACATCAGCATGCCCG
TCCTGAAGACCGTCAACGGTGGATTCCAGATTGCTCGCAACGACAAGCTT
AAGTCCATCAACTTCCCCGATCTGAAGGAGGTCACTGGTGCCATTGACTT
CAGCGGTGACTTTGACGAGTAAGTTTCCCATGTTAGTTCTGATGAGTCGC
ATTGTTTGCTAACACGTTTACAGGGTTTCCCTCTCTTCCCTGACCGAGGT
CAAGGGTGGCTTCAACATGCAGAGCACCGGTAACTTCAGCTGCAGCGCCT
TCAAGACCCTGCGTGAGAACAACGTCATCCGTGGTACCTACACCTGCAAG
GCCAGCACTTCCGACCCCACCACCAGCGATGGATCCTCTGGCACCACCAC
CTCGACCGGCAGCAGCAGCAGCTCTTCCTCCACCAGCAGCGACAGCGCCT
CCGTCATGAACGTGGCTAACATGCCCGCTCTTGGTCTTGCTGCCGTCCTC
GGTGGTCTGATCCAGTACGCTCTGTAA back to topCoding sequence (CDS) from alignment at An04:303726..305052+ >CBS51388_003042-T1 ID=CBS51388_003042-T1|Name=CBS51388_003042-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3618bp|location=Sequence derived from alignment at An04:303726..305052+ (Aspergillus niger CBS 513.88)
ATGGCTTTCATCAAATACGCCCTCCCCGCTCTTGCTGCGGCCCAGGCCGC
CATGGCTGCCAGCTGTGGTAGCAGCGGCAGCACCATCACCATCTCCAGCC
AGAGTGACCTTGACAGCTACGCCACCTGCACCACCCTCAAGGGTGATGTC
GAGATCAGCGAGAGCGCCTCTGGTGACCTCACCCTCAACGGTGTCACCTC
CATCGCTGGTGGACTGAGCTGCACCGGCGGCAGCAACATCACCTCGTTCA
GCTCCTCCTCCCTGAGCTCCATTGGCGACACCTTCAAGCTGGACGGTCTC
ACCACTCTCACCACCCTCAGCTTGACCAACCTCACCAGCGTTGGCTCCAT
CTCCTGGACTGCTCTCCCCGAGCTGCAGTCCCTTGACTTCACCAAGGGTG
TTTCCGAGGCCGGCAGTGTCACCATCACCAACACTGGTCTTACCAGCTTG
GATGGTATCTCCCTCAAGACTGTCGGTACCTTCGACATCACCGAGAACAC
CAACCTGAAGACCGTCAACGTCAACGAGCTCACCAACGCCACTGGTCTGA
TCAACTTCGCTGGTAACATGGACTCCCTGCAGATTATCCTGCCCAACCTC
GGCACCGGTACCAACATGACCTTCCGTAACGTCAGCGGTGTCTCCATCCC
CTCTCTCGAGACTCTCAGCGGTCAGCTCGGTTTCTGGGGTAACACCTTCA
CCAACTTCAGCGCTGCCAACCTCACCACCACTGGTGACCTTGTCTTCGAC
GACAACACCAAGCTGAACAACATCAGCATGCCCGTCCTGAAGACCGTCAA
CGGTGGATTCCAGATTGCTCGCAACGACAAGCTTAAGTCCATCAACTTCC
CCGATCTGAAGGAGGTCACTGGTGCCATTGACTTCAGCGGTGACTTTGAC
GAGGTTTCCCTCTCTTCCCTGACCGAGGTCAAGGGTGGCTTCAACATGCA
GAGCACCGGTAACTTCAGCTGCAGCGCCTTCAAGACCCTGCGTGAGAACA
ACGTCATCCGTGGTACCTACACCTGCAAGGCCAGCACTTCCGACCCCACC
ACCAGCGATGGATCCTCTGGCACCACCACCTCGACCGGCAGCAGCAGCAG
CTCTTCCTCCACCAGCAGCGACAGCGCCTCCGTCATGAACGTGGCTAACA
TGCCCGCTCTTGGTCTTGCTGCCGTCCTCGGTGGTCTGATCCAGTACGCT
CTGTAAATGGCTTTCATCAAATACGCCCTCCCCGCTCTTGCTGCGGCCCA
GGCCGCCATGGCTGCCAGCTGTGGTAGCAGCGGCAGCACCATCACCATCT
CCAGCCAGAGTGACCTTGACAGCTACGCCACCTGCACCACCCTCAAGGGT
GATGTCGAGATCAGCGAGAGCGCCTCTGGTGACCTCACCCTCAACGGTGT
CACCTCCATCGCTGGTGGACTGAGCTGCACCGGCGGCAGCAACATCACCT
CGTTCAGCTCCTCCTCCCTGAGCTCCATTGGCGACACCTTCAAGCTGGAC
GGTCTCACCACTCTCACCACCCTCAGCTTGACCAACCTCACCAGCGTTGG
CTCCATCTCCTGGACTGCTCTCCCCGAGCTGCAGTCCCTTGACTTCACCA
AGGGTGTTTCCGAGGCCGGCAGTGTCACCATCACCAACACTGGTCTTACC
AGCTTGGATGGTATCTCCCTCAAGACTGTCGGTACCTTCGACATCACCGA
GAACACCAACCTGAAGACCGTCAACGTCAACGAGCTCACCAACGCCACTG
GTCTGATCAACTTCGCTGGTAACATGGACTCCCTGCAGATTATCCTGCCC
AACCTCGGCACCGGTACCAACATGACCTTCCGTAACGTCAGCGGTGTCTC
CATCCCCTCTCTCGAGACTCTCAGCGGTCAGCTCGGTTTCTGGGGTAACA
CCTTCACCAACTTCAGCGCTGCCAACCTCACCACCACTGGTGACCTTGTC
TTCGACGACAACACCAAGCTGAACAACATCAGCATGCCCGTCCTGAAGAC
CGTCAACGGTGGATTCCAGATTGCTCGCAACGACAAGCTTAAGTCCATCA
ACTTCCCCGATCTGAAGGAGGTCACTGGTGCCATTGACTTCAGCGGTGAC
TTTGACGAGGTTTCCCTCTCTTCCCTGACCGAGGTCAAGGGTGGCTTCAA
CATGCAGAGCACCGGTAACTTCAGCTGCAGCGCCTTCAAGACCCTGCGTG
AGAACAACGTCATCCGTGGTACCTACACCTGCAAGGCCAGCACTTCCGAC
CCCACCACCAGCGATGGATCCTCTGGCACCACCACCTCGACCGGCAGCAG
CAGCAGCTCTTCCTCCACCAGCAGCGACAGCGCCTCCGTCATGAACGTGG
CTAACATGCCCGCTCTTGGTCTTGCTGCCGTCCTCGGTGGTCTGATCCAG
TACGCTCTGTAAATGGCTTTCATCAAATACGCCCTCCCCGCTCTTGCTGC
GGCCCAGGCCGCCATGGCTGCCAGCTGTGGTAGCAGCGGCAGCACCATCA
CCATCTCCAGCCAGAGTGACCTTGACAGCTACGCCACCTGCACCACCCTC
AAGGGTGATGTCGAGATCAGCGAGAGCGCCTCTGGTGACCTCACCCTCAA
CGGTGTCACCTCCATCGCTGGTGGACTGAGCTGCACCGGCGGCAGCAACA
TCACCTCGTTCAGCTCCTCCTCCCTGAGCTCCATTGGCGACACCTTCAAG
CTGGACGGTCTCACCACTCTCACCACCCTCAGCTTGACCAACCTCACCAG
CGTTGGCTCCATCTCCTGGACTGCTCTCCCCGAGCTGCAGTCCCTTGACT
TCACCAAGGGTGTTTCCGAGGCCGGCAGTGTCACCATCACCAACACTGGT
CTTACCAGCTTGGATGGTATCTCCCTCAAGACTGTCGGTACCTTCGACAT
CACCGAGAACACCAACCTGAAGACCGTCAACGTCAACGAGCTCACCAACG
CCACTGGTCTGATCAACTTCGCTGGTAACATGGACTCCCTGCAGATTATC
CTGCCCAACCTCGGCACCGGTACCAACATGACCTTCCGTAACGTCAGCGG
TGTCTCCATCCCCTCTCTCGAGACTCTCAGCGGTCAGCTCGGTTTCTGGG
GTAACACCTTCACCAACTTCAGCGCTGCCAACCTCACCACCACTGGTGAC
CTTGTCTTCGACGACAACACCAAGCTGAACAACATCAGCATGCCCGTCCT
GAAGACCGTCAACGGTGGATTCCAGATTGCTCGCAACGACAAGCTTAAGT
CCATCAACTTCCCCGATCTGAAGGAGGTCACTGGTGCCATTGACTTCAGC
GGTGACTTTGACGAGGTTTCCCTCTCTTCCCTGACCGAGGTCAAGGGTGG
CTTCAACATGCAGAGCACCGGTAACTTCAGCTGCAGCGCCTTCAAGACCC
TGCGTGAGAACAACGTCATCCGTGGTACCTACACCTGCAAGGCCAGCACT
TCCGACCCCACCACCAGCGATGGATCCTCTGGCACCACCACCTCGACCGG
CAGCAGCAGCAGCTCTTCCTCCACCAGCAGCGACAGCGCCTCCGTCATGA
ACGTGGCTAACATGCCCGCTCTTGGTCTTGCTGCCGTCCTCGGTGGTCTG
ATCCAGTACGCTCTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.1 |
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR032675 |
| DBxref | PFAM:PF12454 |
| Product | 3-prime end of ExtraCellular Mutant protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:303726..305052 + |
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