You are here

Home

CBS51388_003070-T1, CBS51388_003070-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003070-T1
Unique NameCBS51388_003070-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:389799..390668-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003070-T1 ID=CBS51388_003070-T1|Name=CBS51388_003070-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=870bp|location=Sequence derived from alignment at An04:389799..390668- (Aspergillus niger CBS 513.88)
ATGGGTGCCGGTGCGAGTACTCCGTCACCCGAGCCGCCTGCGGCTGGTGT
ATGCCCTGTTGATCACAAAACCCGCGAGGCTTGGTTGCAGCAGCATCAAG
CATCTGGCGGCGCTGCACCCCCTCATCCTCTACCCTCCGAAGATGGACAG
CATTCGAAAGGCAAATCTCAAAGGCCTCTGTCAACCGACCGTGAAGTGAG
CAGTATACCGCGAGCCATTGATACTACCTCCCAGCCGTCGAATGCCGACT
CGTCAAATGCGCCCGCGTCACCCTACGCTGCTACGGCCGCATCGCACGGC
ACCCCATCCAATGCAGAAGCCGAAACAGGTCACGACCCGAATACTGGAAA
CTGGATCTATCCGTCAGAACGGCAATTCTTCGAAGCTCTTGTGCGCAAGG
GCAACACTCCTAGCTCCACAACATCCGCCTCGGAACTGGCGACCACTGTC
GCATCCATCATTCCCATCCACAACGCCGTCAATGAGCGCGCCTGGCAGCA
GATCTTGCAATGGGAAAGTCGAGCTCCCATGTCGGACCCCGGCAGTAAAA
AATGTGGAGGCCCAAAGCTGTATGCCTTCCGCGGTCTGGGTGTCGACCCG
CAGTTCCTGAGCCCTCGCGCCCGTATAAATAACCTGATGGGCTACCAGCT
CCCCTTTGATCGGCACGACTGGGTTGTAGAGAGATGCGGTGGTGAAAGGA
TCGAATATGTCATTGACTTCTACCAAGGGAAATCGTCGGGTGCAAACAAT
GCTCCCGGCCTGGCTGCCAATGCTGGGCCCGGCAAGCTTAGCTTCTATCT
GGATGTTCGGCCAAAACTGAACACAGTAGAGGGCTGCCGGATGAGATTCA
GCAAGATTATGGGACTATGA
back to top

Coding sequence (CDS) from alignment at An04:389799..390668-

>CBS51388_003070-T1 ID=CBS51388_003070-T1|Name=CBS51388_003070-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=870bp|location=Sequence derived from alignment at An04:389799..390668- (Aspergillus niger CBS 513.88)
ATGGGTGCCGGTGCGAGTACTCCGTCACCCGAGCCGCCTGCGGCTGGTGT
ATGCCCTGTTGATCACAAAACCCGCGAGGCTTGGTTGCAGCAGCATCAAG
CATCTGGCGGCGCTGCACCCCCTCATCCTCTACCCTCCGAAGATGGACAG
CATTCGAAAGGCAAATCTCAAAGGCCTCTGTCAACCGACCGTGAAGTGAG
CAGTATACCGCGAGCCATTGATACTACCTCCCAGCCGTCGAATGCCGACT
CGTCAAATGCGCCCGCGTCACCCTACGCTGCTACGGCCGCATCGCACGGC
ACCCCATCCAATGCAGAAGCCGAAACAGGTCACGACCCGAATACTGGAAA
CTGGATCTATCCGTCAGAACGGCAATTCTTCGAAGCTCTTGTGCGCAAGG
GCAACACTCCTAGCTCCACAACATCCGCCTCGGAACTGGCGACCACTGTC
GCATCCATCATTCCCATCCACAACGCCGTCAATGAGCGCGCCTGGCAGCA
GATCTTGCAATGGGAAAGTCGAGCTCCCATGTCGGACCCCGGCAGTAAAA
AATGTGGAGGCCCAAAGCTGTATGCCTTCCGCGGTCTGGGTGTCGACCCG
CAGTTCCTGAGCCCTCGCGCCCGTATAAATAACCTGATGGGCTACCAGCT
CCCCTTTGATCGGCACGACTGGGTTGTAGAGAGATGCGGTGGTGAAAGGA
TCGAATATGTCATTGACTTCTACCAAGGGAAATCGTCGGGTGCAAACAAT
GCTCCCGGCCTGGCTGCCAATGCTGGGCCCGGCAAGCTTAGCTTCTATCT
GGATGTTCGGCCAAAACTGAACACAGTAGAGGGCTGCCGGATGAGATTCA
GCAAGATTATGGGACTATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0004408holocytochrome-c synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003070CBS51388_003070Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003070-T1.cdsCBS51388_003070-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003070-T1.exon1CBS51388_003070-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003070-T1CBS51388_003070-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000511
DBxrefPFAM:PF01265
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:389799..390668 -
Powered by Drupal