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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:406685..408016- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003076-T1 ID=CBS51388_003076-T1|Name=CBS51388_003076-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1332bp|location=Sequence derived from alignment at An04:406685..408016- (Aspergillus niger CBS 513.88)
ATGGATGTAAGTGTCCCTTGCCCCAGATCCACCCACACCCACTCACTAAC
TCCCCATCACCATCAGTCTTCACAATCTCAAAGCGGGTTTCGATCACGCC
GTTCATATCCCACCCTACACCATGTATCTCTGTCTCCACTGAACCCTCGA
TTTCCCATCGACGACGATACCGATGCCCCAGACTATTTCTCTCCTCGCCA
CGAAATCACCGGCACCCCCAGCACAACCAGGACCTCTTATCTCTCTAGTT
TCTCCGTCCCCGGAACCCCAGGCGTCCTATCCCACTCTCACTCCCGTAGC
GGGTCCCGCGTTCGTCGCCATTCCCGAAGCAAGAGCTCCACTCGCATCCA
TTCCAGCGACACCAATTTACAGTCCCGGAGCGTGGCCAGTCCACTTCATC
ACCAGCAGAATGAAGAACTCCGCCGAAGCAGAACACGCTCCTCCCGGCGT
CACCCCGATGCCGTCCACCACCATCATAATCCAGACACAGAATGGATGCT
CCGCGCAGGCATTGCCCTCGCATCCTCGACCCGCGAAGAAAAGGGTCAAA
GCTGGCTCGTTAAACGCCAAAGCTCAACCAGCCTCGTCTCAGACAGCCAT
CAAATCGACCTAGACAGCCAACAGCATCAACAGCCATGGACCTCACGGAG
CAGCACCCGCCGTTCTCAATCCGGCATATCCACCCCTGCCGCCTACTCTC
GTCGAGCCTCCCGCTCACGCCCAACAAGCCGCAGATCCAGCAGACCAGAC
CTGGCCATGACCAGCCTCGACATATGCCGGTTTTCCGGCAGACGAGAGAT
CCCCACCACAACCAGCAGCAGTGGCATCCACACGCCCCTCGAAGAAGAGC
AATCCCGTCACATGCTCCCCGATTTCGTGGACGAGCGCATCCGCGCCGAG
ATGGCAAATATAGCCTCCGAAGAAGATGAAGGAGAAGAAGAAGACAACCT
CAGCTTCACATCCACCTCCGACTCCCTCCACGCCTCCGAAGACGAACTAG
ACGAACAAGAATTCCAGCGTCTCACCCGCGAACGAGGCTTCGGACTAGGC
AGCTGGATCGACCGAATGGTAGAATGGACCCTATTCGGCGTCGACGACTG
GCCACTCTCTACTACCACAACAACTGCACCACCAGCAGTAACATCAGTGG
AGACCATCGACCACGACCCTCAATCTCTCATGCATGAGAACATCCATTCC
CAAGAAACAGACACCATATCCATAGCGACAGAGTCAGATATCGCTTCCAT
ATGCGAAGAGAAACCCGGAACCCGCGGCGGGTGGGAAGATGCCGGATGGT
TGTTCAGGGTTGTGAAACGTGCATTGTCATGA back to topCoding sequence (CDS) from alignment at An04:406685..408016- >CBS51388_003076-T1 ID=CBS51388_003076-T1|Name=CBS51388_003076-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2544bp|location=Sequence derived from alignment at An04:406685..408016- (Aspergillus niger CBS 513.88)
TCTTCACAATCTCAAAGCGGGTTTCGATCACGCCGTTCATATCCCACCCT
ACACCATGTATCTCTGTCTCCACTGAACCCTCGATTTCCCATCGACGACG
ATACCGATGCCCCAGACTATTTCTCTCCTCGCCACGAAATCACCGGCACC
CCCAGCACAACCAGGACCTCTTATCTCTCTAGTTTCTCCGTCCCCGGAAC
CCCAGGCGTCCTATCCCACTCTCACTCCCGTAGCGGGTCCCGCGTTCGTC
GCCATTCCCGAAGCAAGAGCTCCACTCGCATCCATTCCAGCGACACCAAT
TTACAGTCCCGGAGCGTGGCCAGTCCACTTCATCACCAGCAGAATGAAGA
ACTCCGCCGAAGCAGAACACGCTCCTCCCGGCGTCACCCCGATGCCGTCC
ACCACCATCATAATCCAGACACAGAATGGATGCTCCGCGCAGGCATTGCC
CTCGCATCCTCGACCCGCGAAGAAAAGGGTCAAAGCTGGCTCGTTAAACG
CCAAAGCTCAACCAGCCTCGTCTCAGACAGCCATCAAATCGACCTAGACA
GCCAACAGCATCAACAGCCATGGACCTCACGGAGCAGCACCCGCCGTTCT
CAATCCGGCATATCCACCCCTGCCGCCTACTCTCGTCGAGCCTCCCGCTC
ACGCCCAACAAGCCGCAGATCCAGCAGACCAGACCTGGCCATGACCAGCC
TCGACATATGCCGGTTTTCCGGCAGACGAGAGATCCCCACCACAACCAGC
AGCAGTGGCATCCACACGCCCCTCGAAGAAGAGCAATCCCGTCACATGCT
CCCCGATTTCGTGGACGAGCGCATCCGCGCCGAGATGGCAAATATAGCCT
CCGAAGAAGATGAAGGAGAAGAAGAAGACAACCTCAGCTTCACATCCACC
TCCGACTCCCTCCACGCCTCCGAAGACGAACTAGACGAACAAGAATTCCA
GCGTCTCACCCGCGAACGAGGCTTCGGACTAGGCAGCTGGATCGACCGAA
TGGTAGAATGGACCCTATTCGGCGTCGACGACTGGCCACTCTCTACTACC
ACAACAACTGCACCACCAGCAGTAACATCAGTGGAGACCATCGACCACGA
CCCTCAATCTCTCATGCATGAGAACATCCATTCCCAAGAAACAGACACCA
TATCCATAGCGACAGAGTCAGATATCGCTTCCATATGCGAAGAGAAACCC
GGAACCCGCGGCGGGTGGGAAGATGCCGGATGGTTGTTCAGGGTTGTGAA
ACGTGCATTGTCATGAATGGATTCTTCACAATCTCAAAGCGGGTTTCGAT
CACGCCGTTCATATCCCACCCTACACCATGTATCTCTGTCTCCACTGAAC
CCTCGATTTCCCATCGACGACGATACCGATGCCCCAGACTATTTCTCTCC
TCGCCACGAAATCACCGGCACCCCCAGCACAACCAGGACCTCTTATCTCT
CTAGTTTCTCCGTCCCCGGAACCCCAGGCGTCCTATCCCACTCTCACTCC
CGTAGCGGGTCCCGCGTTCGTCGCCATTCCCGAAGCAAGAGCTCCACTCG
CATCCATTCCAGCGACACCAATTTACAGTCCCGGAGCGTGGCCAGTCCAC
TTCATCACCAGCAGAATGAAGAACTCCGCCGAAGCAGAACACGCTCCTCC
CGGCGTCACCCCGATGCCGTCCACCACCATCATAATCCAGACACAGAATG
GATGCTCCGCGCAGGCATTGCCCTCGCATCCTCGACCCGCGAAGAAAAGG
GTCAAAGCTGGCTCGTTAAACGCCAAAGCTCAACCAGCCTCGTCTCAGAC
AGCCATCAAATCGACCTAGACAGCCAACAGCATCAACAGCCATGGACCTC
ACGGAGCAGCACCCGCCGTTCTCAATCCGGCATATCCACCCCTGCCGCCT
ACTCTCGTCGAGCCTCCCGCTCACGCCCAACAAGCCGCAGATCCAGCAGA
CCAGACCTGGCCATGACCAGCCTCGACATATGCCGGTTTTCCGGCAGACG
AGAGATCCCCACCACAACCAGCAGCAGTGGCATCCACACGCCCCTCGAAG
AAGAGCAATCCCGTCACATGCTCCCCGATTTCGTGGACGAGCGCATCCGC
GCCGAGATGGCAAATATAGCCTCCGAAGAAGATGAAGGAGAAGAAGAAGA
CAACCTCAGCTTCACATCCACCTCCGACTCCCTCCACGCCTCCGAAGACG
AACTAGACGAACAAGAATTCCAGCGTCTCACCCGCGAACGAGGCTTCGGA
CTAGGCAGCTGGATCGACCGAATGGTAGAATGGACCCTATTCGGCGTCGA
CGACTGGCCACTCTCTACTACCACAACAACTGCACCACCAGCAGTAACAT
CAGTGGAGACCATCGACCACGACCCTCAATCTCTCATGCATGAGAACATC
CATTCCCAAGAAACAGACACCATATCCATAGCGACAGAGTCAGATATCGC
TTCCATATGCGAAGAGAAACCCGGAACCCGCGGCGGGTGGGAAGATGCCG
GATGGTTGTTCAGGGTTGTGAAACGTGCATTGTCATGAATGGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025040 |
| DBxref | PFAM:PF13136 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:406685..408016 - |
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