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CBS51388_003078-T1, CBS51388_003078-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003078-T1
Unique NameCBS51388_003078-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:412575..413618-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003078-T1 ID=CBS51388_003078-T1|Name=CBS51388_003078-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1044bp|location=Sequence derived from alignment at An04:412575..413618- (Aspergillus niger CBS 513.88)
ATGGCATTCCGGCGTCCTTTGATGCTGTCAACGACAGCATCAACGCCTTT
CCTGTCCGTTGCGAGCCGCAACTCACGCCTGGGAGCCTCCCGATTCAGCA
CCACCATTCGGGCCTCTTCCTCCAGTTCGACCTCAGCCCTAGCCTACAAG
GCCCTTCATCGCCGGTCTCCCCTCCCTCTCCCCGTCAACGATGCCTCGCC
GCAATGGGACGCCCCCACGGCCGTTTCGTCCATTCTCTACGAAACCCCTT
CCGTCCCCACCAACCCTCCCAAGCGCCATATCCTGAACTGTCTGGTGCAG
AACGAGCCCGGTGTGCTGTCCCGCGTGTCCGGTATCCTGGCTGCTCGCGG
CTTCAACATCGACTCTCTCGTCGTCTGCAACACCGAGGTCGAGGATCTGT
CTCGTATGACCATCGTCTTGCAGGGTCAGGACGGCGTCGTCGAGCAGGCT
CGTCGTCAACTCGATGATCTCGTCCCCGTCTGGGCCGTCCTCGATTACAC
TGACTCCGCCCTGGTGCAGCGCGAACTCCTCCTCGCCAAGGTCAGCATCT
TGGGCCCCGAGTTCTTCGAGGAATTGCTGCAGCACCACCGCGAAATCACC
ACCCCCGGTGAGCAGACTGAGGGTCAGAAGGATAAGGCTGCGCAAGTTGC
GAAGACCGAGTTCCACCCCCGTAATCTGCCCCATTCTCAGGCTTTGAGAC
ACAAGCATGAGCATTTGGATGCGATTACTCGCTTGACTCATCAGTTCGGT
GGAAAGGTGCTGGATATCAGTACCAACAACTGCATTGTTGAGGTGTAAGT
TTCCTCCCTAACCAGCATGAGTCATACGATTCTGGTTTTTCTTGGTGCTA
ATGATATGTGATATAGCTCCGCCAAACCCTCCCGTATCGACTCCTTCATG
AAGCTCATCGGCCCCTTCGGTGTCCTCGAGTCCACCCGTACCGGTCTGAT
GGCTCTGCCCCGGTCTCCTCTCTTCGAGCCTAGCGAGGAGATCGAGAAGG
ACGCCGCTGACGTTGTTGACGCCAGCACCCTTCCCCCCGGTTAA
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Coding sequence (CDS) from alignment at An04:412575..413618-

>CBS51388_003078-T1 ID=CBS51388_003078-T1|Name=CBS51388_003078-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1944bp|location=Sequence derived from alignment at An04:412575..413618- (Aspergillus niger CBS 513.88)
CTCCGCCAAACCCTCCCGTATCGACTCCTTCATGAAGCTCATCGGCCCCT
TCGGTGTCCTCGAGTCCACCCGTACCGGTCTGATGGCTCTGCCCCGGTCT
CCTCTCTTCGAGCCTAGCGAGGAGATCGAGAAGGACGCCGCTGACGTTGT
TGACGCCAGCACCCTTCCCCCCGGTTAAATGGCATTCCGGCGTCCTTTGA
TGCTGTCAACGACAGCATCAACGCCTTTCCTGTCCGTTGCGAGCCGCAAC
TCACGCCTGGGAGCCTCCCGATTCAGCACCACCATTCGGGCCTCTTCCTC
CAGTTCGACCTCAGCCCTAGCCTACAAGGCCCTTCATCGCCGGTCTCCCC
TCCCTCTCCCCGTCAACGATGCCTCGCCGCAATGGGACGCCCCCACGGCC
GTTTCGTCCATTCTCTACGAAACCCCTTCCGTCCCCACCAACCCTCCCAA
GCGCCATATCCTGAACTGTCTGGTGCAGAACGAGCCCGGTGTGCTGTCCC
GCGTGTCCGGTATCCTGGCTGCTCGCGGCTTCAACATCGACTCTCTCGTC
GTCTGCAACACCGAGGTCGAGGATCTGTCTCGTATGACCATCGTCTTGCA
GGGTCAGGACGGCGTCGTCGAGCAGGCTCGTCGTCAACTCGATGATCTCG
TCCCCGTCTGGGCCGTCCTCGATTACACTGACTCCGCCCTGGTGCAGCGC
GAACTCCTCCTCGCCAAGGTCAGCATCTTGGGCCCCGAGTTCTTCGAGGA
ATTGCTGCAGCACCACCGCGAAATCACCACCCCCGGTGAGCAGACTGAGG
GTCAGAAGGATAAGGCTGCGCAAGTTGCGAAGACCGAGTTCCACCCCCGT
AATCTGCCCCATTCTCAGGCTTTGAGACACAAGCATGAGCATTTGGATGC
GATTACTCGCTTGACTCATCAGTTCGGTGGAAAGGTGCTGGATATCAGTA
CCAACAACTGCATTGTTGAGGTCTCCGCCAAACCCTCCCGTATCGACTCC
TTCATGAAGCTCATCGGCCCCTTCGGTGTCCTCGAGTCCACCCGTACCGG
TCTGATGGCTCTGCCCCGGTCTCCTCTCTTCGAGCCTAGCGAGGAGATCG
AGAAGGACGCCGCTGACGTTGTTGACGCCAGCACCCTTCCCCCCGGTTAA
ATGGCATTCCGGCGTCCTTTGATGCTGTCAACGACAGCATCAACGCCTTT
CCTGTCCGTTGCGAGCCGCAACTCACGCCTGGGAGCCTCCCGATTCAGCA
CCACCATTCGGGCCTCTTCCTCCAGTTCGACCTCAGCCCTAGCCTACAAG
GCCCTTCATCGCCGGTCTCCCCTCCCTCTCCCCGTCAACGATGCCTCGCC
GCAATGGGACGCCCCCACGGCCGTTTCGTCCATTCTCTACGAAACCCCTT
CCGTCCCCACCAACCCTCCCAAGCGCCATATCCTGAACTGTCTGGTGCAG
AACGAGCCCGGTGTGCTGTCCCGCGTGTCCGGTATCCTGGCTGCTCGCGG
CTTCAACATCGACTCTCTCGTCGTCTGCAACACCGAGGTCGAGGATCTGT
CTCGTATGACCATCGTCTTGCAGGGTCAGGACGGCGTCGTCGAGCAGGCT
CGTCGTCAACTCGATGATCTCGTCCCCGTCTGGGCCGTCCTCGATTACAC
TGACTCCGCCCTGGTGCAGCGCGAACTCCTCCTCGCCAAGGTCAGCATCT
TGGGCCCCGAGTTCTTCGAGGAATTGCTGCAGCACCACCGCGAAATCACC
ACCCCCGGTGAGCAGACTGAGGGTCAGAAGGATAAGGCTGCGCAAGTTGC
GAAGACCGAGTTCCACCCCCGTAATCTGCCCCATTCTCAGGCTTTGAGAC
ACAAGCATGAGCATTTGGATGCGATTACTCGCTTGACTCATCAGTTCGGT
GGAAAGGTGCTGGATATCAGTACCAACAACTGCATTGTTGAGGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:1990610acetolactate synthase regulator activity
Vocabulary: Biological Process
TermDefinition
GO:0009082branched-chain amino acid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ILV6CBS51388_003078Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003078-T1CBS51388_003078-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003078-T1.cdsCBS51388_003078-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003078-T1.exon2CBS51388_003078-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003078-T1.exon1CBS51388_003078-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09263MGE
DBxrefInterPro:IPR039557
DBxrefInterPro:IPR027271
DBxrefInterPro:IPR002912
DBxrefInterPro:IPR004789
DBxrefInterPro:IPR019455
DBxrefPFAM:PF10369
DBxrefPFAM:PF13710
DBxrefPFAM:PF01842
Product regulatory subunit
Productacetolactate synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:412575..413618 -
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